RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 DDX3YO15523 660 aaKnown RBP12.84□□□□□ -0.35
USP6NL-206ENST00000609853 GLI1P08151 1106 aa12.84□□□□□ -0.35
USP6NL-206ENST00000609853 MYBL1P10243 752 aa12.84□□□□□ -0.35
USP6NL-206ENST00000609853 GUCY2DQ02846 1103 aa12.84□□□□□ -0.35
USP6NL-206ENST00000609853 CAPSQ13938 189 aa12.84□□□□□ -0.35
USP6NL-206ENST00000609853 LDLRAD1Q5T700 205 aa12.84□□□□□ -0.35
USP6NL-206ENST00000609853 CDCA2Q69YH5 1023 aaPredicted RBP12.84□□□□□ -0.35
USP6NL-206ENST00000609853 ACAD10Q6JQN1 1059 aa12.84□□□□□ -0.35
USP6NL-206ENST00000609853 DLK2Q6UY11 383 aa12.84□□□□□ -0.35
USP6NL-206ENST00000609853 SND1Q7KZF4 910 aaKnown RBP eCLIP12.84□□□□□ -0.35
USP6NL-206ENST00000609853 ZBTB8OSQ8IWT0 167 aa12.84□□□□□ -0.35
USP6NL-206ENST00000609853 MREGQ8N565 214 aa12.84□□□□□ -0.35
USP6NL-206ENST00000609853 DDX1Q92499 740 aaKnown RBP12.84□□□□□ -0.35
USP6NL-206ENST00000609853 GLG1Q92896 1179 aa12.84□□□□□ -0.35
USP6NL-206ENST00000609853 FGD4Q96M96 766 aa12.84□□□□□ -0.35
USP6NL-206ENST00000609853 PCDHB18PQ96TA0 734 aa12.84□□□□□ -0.35
USP6NL-206ENST00000609853 CGRRF1Q99675 332 aa12.84□□□□□ -0.35
USP6NL-206ENST00000609853 SYT17Q9BSW7 474 aa12.84□□□□□ -0.35
USP6NL-206ENST00000609853 WNT8AQ9H1J5 351 aa12.84□□□□□ -0.35
USP6NL-206ENST00000609853 GOLPH3Q9H4A6 298 aa12.84□□□□□ -0.35
USP6NL-206ENST00000609853 SMARCAD1Q9H4L7 1026 aa12.84□□□□□ -0.35
USP6NL-206ENST00000609853 EPB41L5Q9HCM4 733 aa12.84□□□□□ -0.35
USP6NL-206ENST00000609853 COG5Q9UP83 839 aa12.84□□□□□ -0.35
USP6NL-206ENST00000609853 SLC45A1Q9Y2W3 748 aa12.84□□□□□ -0.35
USP6NL-206ENST00000609853 GOLGA6BA6NDN3 693 aa12.83□□□□□ -0.36
USP6NL-206ENST00000609853 CLDN3O15551 220 aa12.83□□□□□ -0.36
USP6NL-206ENST00000609853 TOM1L1O75674 476 aa12.83□□□□□ -0.36
USP6NL-206ENST00000609853 HLA-DRAP01903 254 aa12.83□□□□□ -0.36
USP6NL-206ENST00000609853 PIK3CAP42336 1068 aa12.83□□□□□ -0.36
USP6NL-206ENST00000609853 NLRP11P59045 1033 aaKnown RBP12.83□□□□□ -0.36
USP6NL-206ENST00000609853 CCNA1P78396 465 aa12.83□□□□□ -0.36
USP6NL-206ENST00000609853 TTLL4Q14679 1199 aa12.83□□□□□ -0.36
USP6NL-206ENST00000609853 LY6KQ17RY6 165 aa12.83□□□□□ -0.36
USP6NL-206ENST00000609853 GPAT2Q6NUI2 795 aa12.83□□□□□ -0.36
USP6NL-206ENST00000609853 CCDC62Q6P9F0 684 aa12.83□□□□□ -0.36
USP6NL-206ENST00000609853 CRELD2Q6UXH1 353 aaPredicted RBP12.83□□□□□ -0.36
USP6NL-206ENST00000609853 TRIM72Q6ZMU5 477 aa12.83□□□□□ -0.36
USP6NL-206ENST00000609853 ZNF771Q7L3S4 317 aaPredicted RBP12.83□□□□□ -0.36
USP6NL-206ENST00000609853 DHX37Q8IY37 1157 aaKnown RBP12.83□□□□□ -0.36
USP6NL-206ENST00000609853 PRPF31Q8WWY3 499 aaKnown RBP12.83□□□□□ -0.36
USP6NL-206ENST00000609853 ZNF516Q92618 1163 aa12.83□□□□□ -0.36
USP6NL-206ENST00000609853 TATDN2Q93075 761 aa12.83□□□□□ -0.36
USP6NL-206ENST00000609853 TARS2Q9BW92 718 aaKnown RBP12.83□□□□□ -0.36
USP6NL-206ENST00000609853 TAF1DQ9H5J8 278 aaPredicted RBP12.83□□□□□ -0.36
USP6NL-206ENST00000609853 TXNRD2Q9NNW7 524 aa12.83□□□□□ -0.36
USP6NL-206ENST00000609853 ADAM21Q9UKJ8 722 aa12.83□□□□□ -0.36
USP6NL-206ENST00000609853 IQCA1LA6NCM1 817 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 BHMG1C9JSJ3 638 aaPredicted RBP12.82□□□□□ -0.36
USP6NL-206ENST00000609853 TULP1O00294 542 aaPredicted RBP12.82□□□□□ -0.36
USP6NL-206ENST00000609853 ASAP2O43150 1006 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 SART1O43290 800 aaKnown RBP12.82□□□□□ -0.36
USP6NL-206ENST00000609853 RAD51CO43502 376 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 OPA1O60313 960 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 PEX10O60683 326 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 MMEP08473 750 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 KRT5P13647 590 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 ACOT2P49753 483 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 ERVK-9P63128 1117 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 TFDP1Q14186 410 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 CLEC16AQ2KHT3 1053 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 Q3C1V9 767 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 TAF3Q5VWG9 929 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 TDRD10Q5VZ19 366 aaKnown RBP12.82□□□□□ -0.36
USP6NL-206ENST00000609853 RNPC3Q96LT9 517 aaKnown RBP12.82□□□□□ -0.36
USP6NL-206ENST00000609853 CCDC113Q9H0I3 377 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 ZCCHC17Q9NP64 241 aaKnown RBP12.82□□□□□ -0.36
USP6NL-206ENST00000609853 AVENQ9NQS1 362 aaPredicted RBP12.82□□□□□ -0.36
USP6NL-206ENST00000609853 CCDC66A2RUB6 948 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 HBP1O60381 514 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 GRIN3BO60391 1043 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 MSCO60682 206 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 SYF2O95926 243 aaKnown RBP12.82□□□□□ -0.36
USP6NL-206ENST00000609853 PGK2P07205 417 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 POTEJP0CG39 1038 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 CYP2C19P33261 490 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 RNASE9P60153 205 aaKnown RBP12.82□□□□□ -0.36
USP6NL-206ENST00000609853 LAMTOR4Q0VGL1 99 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 BIRC3Q13489 604 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 MAPK6Q16659 721 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 PNMA8AQ86V59 439 aaPredicted RBP12.82□□□□□ -0.36
USP6NL-206ENST00000609853 WDR49Q8IV35 697 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 BRSK2Q8IWQ3 736 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 KLHL7Q8IXQ5 586 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 GSPT2Q8IYD1 628 aaKnown RBP12.82□□□□□ -0.36
USP6NL-206ENST00000609853 SLC10A4Q96EP9 437 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 SPATA33Q96N06 139 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 ZSWIM1Q9BR11 485 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 PLVAPQ9BX97 442 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 IMPG2Q9BZV3 1241 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 HAPLN2Q9GZV7 340 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.82□□□□□ -0.36
USP6NL-206ENST00000609853 VPS18Q9P253 973 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 ANKFY1Q9P2R3 1169 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 CNTNAP2Q9UHC6 1331 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 CNTN6Q9UQ52 1028 aa12.82□□□□□ -0.36
USP6NL-206ENST00000609853 MCM3APO60318 1980 aa12.81□□□□□ -0.36
USP6NL-206ENST00000609853 OGTO15294 1046 aa12.81□□□□□ -0.36
USP6NL-206ENST00000609853 HSF2BPO75031 334 aa12.81□□□□□ -0.36
USP6NL-206ENST00000609853 ARIH2O95376 493 aa12.81□□□□□ -0.36
USP6NL-206ENST00000609853 FGGP02679 453 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms