RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 EFHBQ8N7U6 833 aa10.96□□□□□ -0.65
CTSA-215ENST00000607187 TMEM161BQ8NDZ6 487 aa10.96□□□□□ -0.65
CTSA-215ENST00000607187 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.96□□□□□ -0.65
CTSA-215ENST00000607187 PRR7Q8TB68 274 aa10.96□□□□□ -0.65
CTSA-215ENST00000607187 BCL7CQ8WUZ0 217 aaPredicted RBP10.96□□□□□ -0.65
CTSA-215ENST00000607187 TSC1Q92574 1164 aa10.96□□□□□ -0.65
CTSA-215ENST00000607187 LARP4BQ92615 738 aaKnown RBP10.96□□□□□ -0.65
CTSA-215ENST00000607187 KCNN1Q92952 543 aa10.96□□□□□ -0.65
CTSA-215ENST00000607187 ZNF396Q96N95 335 aaPredicted RBP10.96□□□□□ -0.65
CTSA-215ENST00000607187 CDCA3Q99618 268 aaPredicted RBP10.96□□□□□ -0.65
CTSA-215ENST00000607187 ACO2Q99798 780 aaKnown RBP10.96□□□□□ -0.65
CTSA-215ENST00000607187 REEP2Q9BRK0 252 aa10.96□□□□□ -0.65
CTSA-215ENST00000607187 MRPL4Q9BYD3 311 aaKnown RBP10.96□□□□□ -0.65
CTSA-215ENST00000607187 PTPRHQ9HD43 1115 aa10.96□□□□□ -0.65
CTSA-215ENST00000607187 ENTPD7Q9NQZ7 604 aa10.96□□□□□ -0.65
CTSA-215ENST00000607187 SNTG2Q9NY99 539 aa10.96□□□□□ -0.65
CTSA-215ENST00000607187 STK17AQ9UEE5 414 aa10.96□□□□□ -0.65
CTSA-215ENST00000607187 CCDC39Q9UFE4 941 aa10.96□□□□□ -0.65
CTSA-215ENST00000607187 PARP2Q9UGN5 583 aa10.96□□□□□ -0.65
CTSA-215ENST00000607187 ODF2LQ9ULJ1 636 aa10.96□□□□□ -0.65
CTSA-215ENST00000607187 TNFSF13BQ9Y275 285 aa10.96□□□□□ -0.65
CTSA-215ENST00000607187 FAN1Q9Y2M0 1017 aa10.96□□□□□ -0.65
CTSA-215ENST00000607187 FSD2A1L4K1 749 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 C2orf71A6NGG8 1288 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 HIDE1A8MVS5 230 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 H3BQ06 376 aaPredicted RBP10.95□□□□□ -0.66
CTSA-215ENST00000607187 NRP1O14786 923 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 PER2O15055 1255 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 SPTLC2O15270 562 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 LINC01565O15544 149 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 PPP6R2O75170 966 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 TBX10O75333 385 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 RECQL4O94761 1208 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 YEATS4O95619 227 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 F13A1P00488 732 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 CTSAP10619 480 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 MAPTP10636 758 aaKnown RBP10.95□□□□□ -0.66
CTSA-215ENST00000607187 PROZP22891 400 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 TXLNAP40222 546 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 SMTNP53814 917 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 GRIK3Q13003 919 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 GIT2Q14161 759 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 SMC1AQ14683 1233 aaKnown RBP10.95□□□□□ -0.66
CTSA-215ENST00000607187 STK38Q15208 465 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 DUSP6Q16828 381 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 PUS10Q3MIT2 529 aaKnown RBP10.95□□□□□ -0.66
CTSA-215ENST00000607187 RRAGBQ5VZM2 374 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 EP400NLQ6ZTU2 488 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 TMC7Q7Z402 723 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 APBB1IPQ7Z5R6 666 aaPredicted RBP10.95□□□□□ -0.66
CTSA-215ENST00000607187 MRPL43Q8N983 215 aaKnown RBP10.95□□□□□ -0.66
CTSA-215ENST00000607187 EPS8L1Q8TE68 723 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 UHRF1Q96T88 793 aaPredicted RBP10.95□□□□□ -0.66
CTSA-215ENST00000607187 TARS2Q9BW92 718 aaKnown RBP10.95□□□□□ -0.66
CTSA-215ENST00000607187 VN1R3Q9BXE9 311 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 ZBP1Q9H171 429 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 PARVGQ9HBI0 331 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 MARCH5Q9NX47 278 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 KLK14Q9P0G3 267 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 LARSQ9P2J5 1176 aaKnown RBP10.95□□□□□ -0.66
CTSA-215ENST00000607187 STK39Q9UEW8 545 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 IRAK3Q9Y616 596 aa10.95□□□□□ -0.66
CTSA-215ENST00000607187 MTCL1Q9Y4B5 1905 aaKnown RBP10.94□□□□□ -0.66
CTSA-215ENST00000607187 H0YCG3 227 aa10.94□□□□□ -0.66
CTSA-215ENST00000607187 ABLIM1O14639 778 aa10.94□□□□□ -0.66
CTSA-215ENST00000607187 CXCL14O95715 111 aa10.94□□□□□ -0.66
CTSA-215ENST00000607187 GLP2RO95838 553 aa10.94□□□□□ -0.66
CTSA-215ENST00000607187 EFEMP2O95967 443 aa10.94□□□□□ -0.66
CTSA-215ENST00000607187 HOXB3P14651 431 aaPredicted RBP10.94□□□□□ -0.66
CTSA-215ENST00000607187 SCP2P22307 547 aa10.94□□□□□ -0.66
CTSA-215ENST00000607187 SOX11P35716 441 aa10.94□□□□□ -0.66
CTSA-215ENST00000607187 NCKAP1LP55160 1127 aa10.94□□□□□ -0.66
CTSA-215ENST00000607187 STRN3Q13033 797 aa10.94□□□□□ -0.66
CTSA-215ENST00000607187 KCNC3Q14003 757 aa10.94□□□□□ -0.66
CTSA-215ENST00000607187 BMS1Q14692 1282 aaKnown RBP10.94□□□□□ -0.66
CTSA-215ENST00000607187 PTCRAQ6ISU1 281 aaPredicted RBP10.94□□□□□ -0.66
CTSA-215ENST00000607187 TMEM184AQ6ZMB5 413 aa10.94□□□□□ -0.66
CTSA-215ENST00000607187 SND1Q7KZF4 910 aaKnown RBP eCLIP10.94□□□□□ -0.663e-6■□□□□ 10.9
CTSA-215ENST00000607187 VN1R2Q8NFZ6 395 aa10.94□□□□□ -0.66
CTSA-215ENST00000607187 MSLNLQ96KJ4 702 aa10.94□□□□□ -0.66
CTSA-215ENST00000607187 RPS6KC1Q96S38 1066 aa10.94□□□□□ -0.66
CTSA-215ENST00000607187 CDT1Q9H211 546 aa10.94□□□□□ -0.66
CTSA-215ENST00000607187 CXCL16Q9H2A7 254 aa10.94□□□□□ -0.66
CTSA-215ENST00000607187 CLEC1BQ9P126 229 aa10.94□□□□□ -0.66
CTSA-215ENST00000607187 VWA8A3KMH1 1905 aa10.94□□□□□ -0.66
CTSA-215ENST00000607187 A0A087X0B3 334 aa10.93□□□□□ -0.66
CTSA-215ENST00000607187 CFAP99D6REC4 459 aa10.93□□□□□ -0.66
CTSA-215ENST00000607187 PTGESO14684 152 aa10.93□□□□□ -0.66
CTSA-215ENST00000607187 NR1I2O75469 434 aa10.93□□□□□ -0.66
CTSA-215ENST00000607187 TOM1L1O75674 476 aa10.93□□□□□ -0.66
CTSA-215ENST00000607187 FAM13AO94988 1023 aa10.93□□□□□ -0.66
CTSA-215ENST00000607187 KRT18P05783 430 aaKnown RBP10.93□□□□□ -0.66
CTSA-215ENST00000607187 MCF2P10911 925 aa10.93□□□□□ -0.66
CTSA-215ENST00000607187 IL9P15248 144 aa10.93□□□□□ -0.66
CTSA-215ENST00000607187 GRM5P41594 1212 aa10.93□□□□□ -0.66
CTSA-215ENST00000607187 OR1G1P47890 313 aa10.93□□□□□ -0.66
CTSA-215ENST00000607187 NDUFV1P49821 464 aa10.93□□□□□ -0.66
CTSA-215ENST00000607187 RBM10P98175 930 aaKnown RBP10.93□□□□□ -0.66
CTSA-215ENST00000607187 COASYQ13057 564 aa10.93□□□□□ -0.66
CTSA-215ENST00000607187 NAB2Q15742 525 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms