RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 FAM171A1Q5VUB5 890 aa16.62■□□□□ 0.25
SSBP4-214ENST00000607020 NEK8Q86SG6 692 aa16.62■□□□□ 0.25
SSBP4-214ENST00000607020 ZNF687Q8N1G0 1237 aa16.62■□□□□ 0.25
SSBP4-214ENST00000607020 ASAP3Q8TDY4 903 aa16.62■□□□□ 0.25
SSBP4-214ENST00000607020 RABGGTAQ92696 567 aa16.62■□□□□ 0.25
SSBP4-214ENST00000607020 DYDC2Q96IM9 177 aa16.62■□□□□ 0.25
SSBP4-214ENST00000607020 NAP1L4Q99733 375 aaKnown RBP16.62■□□□□ 0.25
SSBP4-214ENST00000607020 PAAF1Q9BRP4 392 aa16.62■□□□□ 0.25
SSBP4-214ENST00000607020 KLK14Q9P0G3 267 aa16.62■□□□□ 0.25
SSBP4-214ENST00000607020 DAXXQ9UER7 740 aaPredicted RBP16.62■□□□□ 0.25
SSBP4-214ENST00000607020 PARP2Q9UGN5 583 aa16.62■□□□□ 0.25
SSBP4-214ENST00000607020 ADAM12O43184 909 aa16.61■□□□□ 0.25
SSBP4-214ENST00000607020 B4GALT5O43286 388 aa16.61■□□□□ 0.25
SSBP4-214ENST00000607020 DGAT1O75907 488 aa16.61■□□□□ 0.25
SSBP4-214ENST00000607020 NPTXRO95502 500 aa16.61■□□□□ 0.25
SSBP4-214ENST00000607020 GLRA2P23416 452 aa16.61■□□□□ 0.25
SSBP4-214ENST00000607020 PSMA5P28066 241 aa16.61■□□□□ 0.25
SSBP4-214ENST00000607020 NRLP54845 237 aa16.61■□□□□ 0.25
SSBP4-214ENST00000607020 PABPC1LQ4VXU2 614 aaKnown RBP16.61■□□□□ 0.25
SSBP4-214ENST00000607020 PPP4R3CPQ6ZMV5 832 aa16.61■□□□□ 0.25
SSBP4-214ENST00000607020 TPRG1Q6ZUI0 275 aa16.61■□□□□ 0.25
SSBP4-214ENST00000607020 CELF5Q8N6W0 485 aaKnown RBP16.61■□□□□ 0.25
SSBP4-214ENST00000607020 SLC7A14Q8TBB6 771 aa16.61■□□□□ 0.25
SSBP4-214ENST00000607020 HSD17B14Q9BPX1 270 aa16.61■□□□□ 0.25
SSBP4-214ENST00000607020 KXD1Q9BQD3 176 aa16.61■□□□□ 0.25
SSBP4-214ENST00000607020 IER2Q9BTL4 223 aa16.61■□□□□ 0.25
SSBP4-214ENST00000607020 PARD6AQ9NPB6 346 aa16.61■□□□□ 0.25
SSBP4-214ENST00000607020 ANKEF1Q9NU02 776 aa16.61■□□□□ 0.25
SSBP4-214ENST00000607020 GMEB2Q9UKD1 530 aa16.61■□□□□ 0.25
SSBP4-214ENST00000607020 USP18Q9UMW8 372 aa16.61■□□□□ 0.25
SSBP4-214ENST00000607020 DCDC2BA2VCK2 349 aa16.6■□□□□ 0.25
SSBP4-214ENST00000607020 LRP3O75074 770 aa16.6■□□□□ 0.25
SSBP4-214ENST00000607020 CDC45O75419 566 aa16.6■□□□□ 0.25
SSBP4-214ENST00000607020 KIF4AO95239 1232 aa16.6■□□□□ 0.25
SSBP4-214ENST00000607020 MTAPQ13126 283 aa16.6■□□□□ 0.25
SSBP4-214ENST00000607020 CTTNQ14247 550 aaKnown RBP16.6■□□□□ 0.25
SSBP4-214ENST00000607020 NAB2Q15742 525 aa16.6■□□□□ 0.25
SSBP4-214ENST00000607020 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.6■□□□□ 0.25
SSBP4-214ENST00000607020 CEP57Q86XR8 500 aa16.6■□□□□ 0.25
SSBP4-214ENST00000607020 DNASE1L2Q92874 299 aa16.6■□□□□ 0.25
SSBP4-214ENST00000607020 ELSPBP1Q96BH3 223 aa16.6■□□□□ 0.25
SSBP4-214ENST00000607020 ZNF274Q96GC6 653 aaPredicted RBP16.6■□□□□ 0.25
SSBP4-214ENST00000607020 PRIMPOLQ96LW4 560 aa16.6■□□□□ 0.25
SSBP4-214ENST00000607020 POLIQ9UNA4 740 aa16.6■□□□□ 0.25
SSBP4-214ENST00000607020 WDR81Q562E7 1941 aa16.59■□□□□ 0.25
SSBP4-214ENST00000607020 CCDC194A0A1B0GVG4 234 aa16.59■□□□□ 0.25
SSBP4-214ENST00000607020 MAN2B1O00754 1011 aa16.59■□□□□ 0.25
SSBP4-214ENST00000607020 PTGESO14684 152 aa16.59■□□□□ 0.25
SSBP4-214ENST00000607020 THP07101 528 aa16.59■□□□□ 0.25
SSBP4-214ENST00000607020 FGFR3P22607 806 aa16.59■□□□□ 0.25
SSBP4-214ENST00000607020 FAM187BQ17R55 369 aa16.59■□□□□ 0.25
SSBP4-214ENST00000607020 LAIR1Q6GTX8 287 aa16.59■□□□□ 0.25
SSBP4-214ENST00000607020 NCAPH2Q6IBW4 605 aa16.59■□□□□ 0.25
SSBP4-214ENST00000607020 TSSK4Q6SA08 328 aa16.59■□□□□ 0.25
SSBP4-214ENST00000607020 TPH2Q8IWU9 490 aa16.59■□□□□ 0.25
SSBP4-214ENST00000607020 SLFN12Q8IYM2 578 aa16.59■□□□□ 0.25
SSBP4-214ENST00000607020 PLA2G2FQ9BZM2 168 aa16.59■□□□□ 0.25
SSBP4-214ENST00000607020 CHRDQ9H2X0 955 aa16.59■□□□□ 0.25
SSBP4-214ENST00000607020 FZD8Q9H461 694 aa16.59■□□□□ 0.25
SSBP4-214ENST00000607020 TRPV5Q9NQA5 729 aa16.59■□□□□ 0.25
SSBP4-214ENST00000607020 HCFC1R1Q9NWW0 138 aa16.59■□□□□ 0.25
SSBP4-214ENST00000607020 MTRRQ9UBK8 725 aa16.59■□□□□ 0.25
SSBP4-214ENST00000607020 CACNG4Q9UBN1 327 aa16.59■□□□□ 0.25
SSBP4-214ENST00000607020 MRPS23Q9Y3D9 190 aaKnown RBP16.59■□□□□ 0.25
SSBP4-214ENST00000607020 BACE2Q9Y5Z0 518 aa16.59■□□□□ 0.25
SSBP4-214ENST00000607020 CASTOR2A6NHX0 329 aa16.58■□□□□ 0.24
SSBP4-214ENST00000607020 TMEM189-UBE2V1I3L0A0 370 aa16.58■□□□□ 0.24
SSBP4-214ENST00000607020 CPLX1O14810 134 aa16.58■□□□□ 0.24
SSBP4-214ENST00000607020 SLC30A4O14863 429 aa16.58■□□□□ 0.24
SSBP4-214ENST00000607020 CCNT1O60563 726 aaKnown RBP16.58■□□□□ 0.24
SSBP4-214ENST00000607020 MICAL2O94851 1124 aa16.58■□□□□ 0.24
SSBP4-214ENST00000607020 BAG4O95429 457 aaKnown RBP16.58■□□□□ 0.24
SSBP4-214ENST00000607020 RETP07949 1114 aa16.58■□□□□ 0.24
SSBP4-214ENST00000607020 XRCC6P12956 609 aaKnown RBP eCLIP16.58■□□□□ 0.24
SSBP4-214ENST00000607020 OR1D2P34982 312 aa16.58■□□□□ 0.24
SSBP4-214ENST00000607020 RBM25P49756 843 aaKnown RBP16.58■□□□□ 0.24
SSBP4-214ENST00000607020 CYP4A11Q02928 519 aa16.58■□□□□ 0.24
SSBP4-214ENST00000607020 TOB2Q14106 344 aaPredicted RBP16.58■□□□□ 0.24
SSBP4-214ENST00000607020 CDR2LQ86X02 465 aaPredicted RBP16.58■□□□□ 0.24
SSBP4-214ENST00000607020 NETO1Q8TDF5 533 aa16.58■□□□□ 0.24
SSBP4-214ENST00000607020 HASPINQ8TF76 798 aa16.58■□□□□ 0.24
SSBP4-214ENST00000607020 AIFM3Q96NN9 605 aa16.58■□□□□ 0.24
SSBP4-214ENST00000607020 EIF2AK1Q9BQI3 630 aaKnown RBP16.58■□□□□ 0.24
SSBP4-214ENST00000607020 HEBP1Q9NRV9 189 aa16.58■□□□□ 0.24
SSBP4-214ENST00000607020 PRMT7Q9NVM4 692 aaPredicted RBP16.58■□□□□ 0.24
SSBP4-214ENST00000607020 MARCH6O60337 910 aa16.57■□□□□ 0.24
SSBP4-214ENST00000607020 RHOP08100 348 aa16.57■□□□□ 0.24
SSBP4-214ENST00000607020 RARRES1P49788 294 aa16.57■□□□□ 0.24
SSBP4-214ENST00000607020 PPP2R5DQ14738 602 aa16.57■□□□□ 0.24
SSBP4-214ENST00000607020 ST3GAL2Q16842 350 aa16.57■□□□□ 0.24
SSBP4-214ENST00000607020 TANGO2Q6ICL3 276 aa16.57■□□□□ 0.24
SSBP4-214ENST00000607020 CPLX2Q6PUV4 134 aaKnown RBP16.57■□□□□ 0.24
SSBP4-214ENST00000607020 POTEHQ6S545 545 aa16.57■□□□□ 0.24
SSBP4-214ENST00000607020 MCRS1Q96EZ8 462 aa16.57■□□□□ 0.24
SSBP4-214ENST00000607020 RAB23Q9ULC3 237 aa16.57■□□□□ 0.24
SSBP4-214ENST00000607020 KCNJ14Q9UNX9 436 aa16.57■□□□□ 0.24
SSBP4-214ENST00000607020 ARHGEF37A1IGU5 675 aa16.56■□□□□ 0.24
SSBP4-214ENST00000607020 PTPN2P17706 415 aa16.56■□□□□ 0.24
SSBP4-214ENST00000607020 SLC5A9Q2M3M2 681 aa16.56■□□□□ 0.24
SSBP4-214ENST00000607020 CDCA2Q69YH5 1023 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms