RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 PIGRP01833 764 aa18.1■□□□□ 0.49
LINC00240-203ENST00000606878 CLTAP09496 248 aa18.1■□□□□ 0.49
LINC00240-203ENST00000606878 ZC2HC1CQ53FD0 456 aaPredicted RBP18.1■□□□□ 0.49
LINC00240-203ENST00000606878 XKR4Q5GH76 650 aa18.1■□□□□ 0.49
LINC00240-203ENST00000606878 TAS1R1Q7RTX1 841 aa18.1■□□□□ 0.49
LINC00240-203ENST00000606878 CCDC65Q8IXS2 484 aa18.1■□□□□ 0.49
LINC00240-203ENST00000606878 LEO1Q8WVC0 666 aaPredicted RBP18.1■□□□□ 0.49
LINC00240-203ENST00000606878 AUTS2Q8WXX7 1259 aa18.1■□□□□ 0.49
LINC00240-203ENST00000606878 RABGGTAQ92696 567 aa18.1■□□□□ 0.49
LINC00240-203ENST00000606878 STAMQ92783 540 aa18.1■□□□□ 0.49
LINC00240-203ENST00000606878 UHRF1Q96T88 793 aaPredicted RBP18.1■□□□□ 0.49
LINC00240-203ENST00000606878 SLC38A7Q9NVC3 462 aa18.1■□□□□ 0.49
LINC00240-203ENST00000606878 KBTBD4Q9NVX7 518 aa18.1■□□□□ 0.49
LINC00240-203ENST00000606878 CLEC1BQ9P126 229 aa18.1■□□□□ 0.49
LINC00240-203ENST00000606878 ADAM28Q9UKQ2 775 aa18.1■□□□□ 0.49
LINC00240-203ENST00000606878 KCNH3Q9ULD8 1083 aa18.1■□□□□ 0.49
LINC00240-203ENST00000606878 PCDHB13Q9Y5F0 798 aa18.1■□□□□ 0.49
LINC00240-203ENST00000606878 UNC80Q8N2C7 3258 aa18.1■□□□□ 0.49
LINC00240-203ENST00000606878 TBX10O75333 385 aa18.09■□□□□ 0.49
LINC00240-203ENST00000606878 URODP06132 367 aa18.09■□□□□ 0.49
LINC00240-203ENST00000606878 KCNE1P15382 129 aa18.09■□□□□ 0.49
LINC00240-203ENST00000606878 NUCB2P80303 420 aa18.09■□□□□ 0.49
LINC00240-203ENST00000606878 PTPN14Q15678 1187 aa18.09■□□□□ 0.49
LINC00240-203ENST00000606878 NAB2Q15742 525 aa18.09■□□□□ 0.49
LINC00240-203ENST00000606878 CLUL1Q15846 466 aa18.09■□□□□ 0.49
LINC00240-203ENST00000606878 GLRA4Q5JXX5 417 aa18.09■□□□□ 0.49
LINC00240-203ENST00000606878 ADALQ6DHV7 355 aa18.09■□□□□ 0.49
LINC00240-203ENST00000606878 SLFN12LQ6IEE8 588 aa18.09■□□□□ 0.49
LINC00240-203ENST00000606878 LLGL2Q6P1M3 1020 aa18.09■□□□□ 0.49
LINC00240-203ENST00000606878 DCLRE1AQ6PJP8 1040 aa18.09■□□□□ 0.49
LINC00240-203ENST00000606878 PPFIBP1Q86W92 1011 aa18.09■□□□□ 0.49
LINC00240-203ENST00000606878 MAP4K3Q8IVH8 894 aa18.09■□□□□ 0.49
LINC00240-203ENST00000606878 HVCN1Q96D96 273 aa18.09■□□□□ 0.49
LINC00240-203ENST00000606878 DDX27Q96GQ7 796 aaKnown RBP18.09■□□□□ 0.49
LINC00240-203ENST00000606878 UROC1Q96N76 676 aa18.09■□□□□ 0.49
LINC00240-203ENST00000606878 PPP1R10Q96QC0 940 aaKnown RBP18.09■□□□□ 0.49
LINC00240-203ENST00000606878 HERC2P3Q9BVR0 1158 aa18.09■□□□□ 0.49
LINC00240-203ENST00000606878 SCAND2PQ9GZW5 306 aaPredicted RBP18.09■□□□□ 0.49
LINC00240-203ENST00000606878 PLEKHA5Q9HAU0 1116 aa18.09■□□□□ 0.49
LINC00240-203ENST00000606878 MAGEF1Q9HAY2 307 aa18.09■□□□□ 0.49
LINC00240-203ENST00000606878 TBC1D7Q9P0N9 293 aa18.09■□□□□ 0.49
LINC00240-203ENST00000606878 EXOC7Q9UPT5 735 aa18.09■□□□□ 0.49
LINC00240-203ENST00000606878 PLXNA4Q9HCM2 1894 aa18.08■□□□□ 0.49
LINC00240-203ENST00000606878 A0A0B4J269 797 aa18.08■□□□□ 0.48
LINC00240-203ENST00000606878 F8W810 466 aa18.08■□□□□ 0.48
LINC00240-203ENST00000606878 LILRB3O75022 631 aa18.08■□□□□ 0.48
LINC00240-203ENST00000606878 GLP2RO95838 553 aa18.08■□□□□ 0.48
LINC00240-203ENST00000606878 EFEMP2O95967 443 aa18.08■□□□□ 0.48
LINC00240-203ENST00000606878 CMA1P23946 247 aa18.08■□□□□ 0.48
LINC00240-203ENST00000606878 KLRC2P26717 231 aa18.08■□□□□ 0.48
LINC00240-203ENST00000606878 COASYQ13057 564 aa18.08■□□□□ 0.48
LINC00240-203ENST00000606878 KCNC3Q14003 757 aa18.08■□□□□ 0.48
LINC00240-203ENST00000606878 SLC10A6Q3KNW5 377 aa18.08■□□□□ 0.48
LINC00240-203ENST00000606878 USP41Q3LFD5 358 aa18.08■□□□□ 0.48
LINC00240-203ENST00000606878 SEZ6Q53EL9 994 aa18.08■□□□□ 0.48
LINC00240-203ENST00000606878 KIAA0319Q5VV43 1072 aa18.08■□□□□ 0.48
LINC00240-203ENST00000606878 FUT10Q6P4F1 479 aa18.08■□□□□ 0.48
LINC00240-203ENST00000606878 VN1R2Q8NFZ6 395 aa18.08■□□□□ 0.48
LINC00240-203ENST00000606878 CASP10Q92851 521 aa18.08■□□□□ 0.48
LINC00240-203ENST00000606878 MSLNLQ96KJ4 702 aa18.08■□□□□ 0.48
LINC00240-203ENST00000606878 SNX27Q96L92 541 aa18.08■□□□□ 0.48
LINC00240-203ENST00000606878 KLHL5Q96PQ7 755 aa18.08■□□□□ 0.48
LINC00240-203ENST00000606878 ACCSQ96QU6 501 aa18.08■□□□□ 0.48
LINC00240-203ENST00000606878 PAAF1Q9BRP4 392 aa18.08■□□□□ 0.48
LINC00240-203ENST00000606878 MSTO1Q9BUK6 570 aa18.08■□□□□ 0.48
LINC00240-203ENST00000606878 GPR62Q9BZJ7 368 aa18.08■□□□□ 0.48
LINC00240-203ENST00000606878 OLFML3Q9NRN5 406 aa18.08■□□□□ 0.48
LINC00240-203ENST00000606878 CHST7Q9NS84 486 aa18.08■□□□□ 0.48
LINC00240-203ENST00000606878 BARX2Q9UMQ3 279 aaPredicted RBP18.08■□□□□ 0.48
LINC00240-203ENST00000606878 FRMD3A2A2Y4 597 aa18.07■□□□□ 0.48
LINC00240-203ENST00000606878 C2CD2LO14523 706 aa18.07■□□□□ 0.48
LINC00240-203ENST00000606878 OGTO15294 1046 aa18.07■□□□□ 0.48
LINC00240-203ENST00000606878 B3GAT3O94766 335 aa18.07■□□□□ 0.48
LINC00240-203ENST00000606878 GCNT3O95395 438 aa18.07■□□□□ 0.48
LINC00240-203ENST00000606878 HOXB8P17481 243 aaPredicted RBP18.07■□□□□ 0.48
LINC00240-203ENST00000606878 GLUD2P49448 558 aa18.07■□□□□ 0.48
LINC00240-203ENST00000606878 RBM10P98175 930 aaKnown RBP18.07■□□□□ 0.48
LINC00240-203ENST00000606878 ELAVL2Q12926 359 aaKnown RBP18.07■□□□□ 0.48
LINC00240-203ENST00000606878 SMAD4Q13485 552 aaKnown RBP18.07■□□□□ 0.48
LINC00240-203ENST00000606878 ALCAMQ13740 583 aa18.07■□□□□ 0.48
LINC00240-203ENST00000606878 POSTNQ15063 836 aa18.07■□□□□ 0.48
LINC00240-203ENST00000606878 ANKRD54Q6NXT1 300 aa18.07■□□□□ 0.48
LINC00240-203ENST00000606878 GPR65Q8IYL9 337 aa18.07■□□□□ 0.48
LINC00240-203ENST00000606878 RNF168Q8IYW5 571 aaPredicted RBP18.07■□□□□ 0.48
LINC00240-203ENST00000606878 C7orf25Q9BPX7 421 aa18.07■□□□□ 0.48
LINC00240-203ENST00000606878 STRA6Q9BX79 667 aa18.07■□□□□ 0.48
LINC00240-203ENST00000606878 TRIM9Q9C026 710 aa18.07■□□□□ 0.48
LINC00240-203ENST00000606878 HAPLN2Q9GZV7 340 aa18.07■□□□□ 0.48
LINC00240-203ENST00000606878 CNTN3Q9P232 1028 aa18.07■□□□□ 0.48
LINC00240-203ENST00000606878 CACNG4Q9UBN1 327 aa18.07■□□□□ 0.48
LINC00240-203ENST00000606878 HCFC2Q9Y5Z7 792 aa18.07■□□□□ 0.48
LINC00240-203ENST00000606878 MYH11P35749 1972 aa18.07■□□□□ 0.48
LINC00240-203ENST00000606878 SF3B1O75533 1304 aaKnown RBP eCLIP18.06■□□□□ 0.483e-6■■■■■ 137.9
LINC00240-203ENST00000606878 ANKRD63C9JTQ0 380 aa18.06■□□□□ 0.48
LINC00240-203ENST00000606878 MBTPS2O43462 519 aa18.06■□□□□ 0.48
LINC00240-203ENST00000606878 TRAPPC3O43617 180 aa18.06■□□□□ 0.48
LINC00240-203ENST00000606878 PPP1R37O75864 691 aa18.06■□□□□ 0.48
LINC00240-203ENST00000606878 CNPP09543 421 aaKnown RBP18.06■□□□□ 0.48
LINC00240-203ENST00000606878 IL9P15248 144 aa18.06■□□□□ 0.48
LINC00240-203ENST00000606878 RPL9P32969 192 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms