RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 CASKIN2Q8WXE0 1202 aa2.14□□□□□ -2.07
SNORA28-201ENST00000606769 HDAC10Q969S8 669 aa2.14□□□□□ -2.07
SNORA28-201ENST00000606769 IL17RAQ96F46 866 aa2.14□□□□□ -2.07
SNORA28-201ENST00000606769 PAWRQ96IZ0 340 aaKnown RBP2.14□□□□□ -2.07
SNORA28-201ENST00000606769 TMX3Q96JJ7 454 aa2.14□□□□□ -2.07
SNORA28-201ENST00000606769 CLPTM1LQ96KA5 538 aa2.14□□□□□ -2.07
SNORA28-201ENST00000606769 OR14A2Q96R54 314 aa2.14□□□□□ -2.07
SNORA28-201ENST00000606769 CGRRF1Q99675 332 aa2.14□□□□□ -2.07
SNORA28-201ENST00000606769 VRK1Q99986 396 aaPredicted RBP2.14□□□□□ -2.07
SNORA28-201ENST00000606769 C7orf25Q9BPX7 421 aa2.14□□□□□ -2.07
SNORA28-201ENST00000606769 TCF25Q9BQ70 676 aa2.14□□□□□ -2.07
SNORA28-201ENST00000606769 NDC1Q9BTX1 674 aa2.14□□□□□ -2.07
SNORA28-201ENST00000606769 TEX101Q9BY14 249 aa2.14□□□□□ -2.07
SNORA28-201ENST00000606769 C12orf65Q9H3J6 166 aaKnown RBP2.14□□□□□ -2.07
SNORA28-201ENST00000606769 NELFAQ9H3P2 528 aa2.14□□□□□ -2.07
SNORA28-201ENST00000606769 MSL2Q9HCI7 577 aa2.14□□□□□ -2.07
SNORA28-201ENST00000606769 NMRK2Q9NPI5 230 aa2.14□□□□□ -2.07
SNORA28-201ENST00000606769 CHST12Q9NRB3 414 aa2.14□□□□□ -2.07
SNORA28-201ENST00000606769 LANCL2Q9NS86 450 aa2.14□□□□□ -2.07
SNORA28-201ENST00000606769 MRPS18AQ9NVS2 196 aaKnown RBP2.14□□□□□ -2.07
SNORA28-201ENST00000606769 SLC52A1Q9NWF4 448 aa2.14□□□□□ -2.07
SNORA28-201ENST00000606769 NCDNQ9UBB6 729 aa2.14□□□□□ -2.07
SNORA28-201ENST00000606769 TCEAL9Q9UHQ7 104 aa2.14□□□□□ -2.07
SNORA28-201ENST00000606769 RAPGEFL1Q9UHV5 662 aa2.14□□□□□ -2.07
SNORA28-201ENST00000606769 ST6GALNAC2Q9UJ37 374 aa2.14□□□□□ -2.07
SNORA28-201ENST00000606769 SLC45A2Q9UMX9 530 aa2.14□□□□□ -2.07
SNORA28-201ENST00000606769 CFAP20Q9Y6A4 193 aaKnown RBP2.14□□□□□ -2.07
SNORA28-201ENST00000606769 A0A088AWK7 358 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 NPEPPSL1A6NEC2 478 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 TBKBP1A7MCY6 615 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 LEFTY2O00292 366 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 NRP1O14786 923 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 ZNF623O75123 536 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 OFD1O75665 1012 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 TYRP14679 529 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 ATF3P18847 181 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 PRDX5P30044 214 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 PTPN7P35236 360 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 RPS19P39019 145 aaKnown RBP2.13□□□□□ -2.07
SNORA28-201ENST00000606769 SCNN1GP51170 649 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 NPEPPSP55786 919 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 TBX4P57082 545 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 SLC25A3Q00325 362 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 SLFN5Q08AF3 891 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 EFEMP1Q12805 493 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 PLS1Q14651 629 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 NFIXQ14938 502 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 MINDY4Q4G0A6 757 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 FKBP15Q5T1M5 1219 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 NAIF1Q69YI7 327 aaPredicted RBP2.13□□□□□ -2.07
SNORA28-201ENST00000606769 KRT40Q6A162 431 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 SEM1Q6ZVN7 128 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 POLNQ7Z5Q5 900 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 CIR1Q86X95 450 aaPredicted RBP2.13□□□□□ -2.07
SNORA28-201ENST00000606769 PPP1R3BQ86XI6 285 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 DGKHQ86XP1 1220 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 RNF169Q8NCN4 708 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 CXorf38Q8TB03 319 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 RELTQ969Z4 430 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 C1GALT1C1Q96EU7 318 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 CYFIP2Q96F07 1278 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 CDC5LQ99459 802 aaKnown RBP2.13□□□□□ -2.07
SNORA28-201ENST00000606769 MAP3K14Q99558 947 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 BDH2Q9BUT1 245 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 MRI1Q9BV20 369 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 C1orf43Q9BWL3 253 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 B3GNT5Q9BYG0 378 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 TMEM60Q9H2L4 133 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 BHMT2Q9H2M3 363 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 DDX21Q9NR30 783 aaKnown RBP eCLIP2.13□□□□□ -2.07
SNORA28-201ENST00000606769 TDP1Q9NUW8 608 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 FAM30AQ9NZY2 134 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 CALCOCO1Q9P1Z2 691 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 RUVBL1Q9Y265 456 aaKnown RBP2.13□□□□□ -2.07
SNORA28-201ENST00000606769 PCDHA3Q9Y5H8 950 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 NR2E3Q9Y5X4 410 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 ZNF536O15090 1300 aa2.13□□□□□ -2.07
SNORA28-201ENST00000606769 TCRBV7S2A1N4TA0A589 114 aa2.12□□□□□ -2.07
SNORA28-201ENST00000606769 KRTAP23-1A1A580 65 aa2.12□□□□□ -2.07
SNORA28-201ENST00000606769 AHRRA9YTQ3 701 aa2.12□□□□□ -2.07
SNORA28-201ENST00000606769 E9PLN8 166 aa2.12□□□□□ -2.07
SNORA28-201ENST00000606769 TPP1O14773 563 aa2.12□□□□□ -2.07
SNORA28-201ENST00000606769 ZNF185O15231 689 aa2.12□□□□□ -2.07
SNORA28-201ENST00000606769 GRM6O15303 877 aa2.12□□□□□ -2.07
SNORA28-201ENST00000606769 PJA2O43164 708 aa2.12□□□□□ -2.07
SNORA28-201ENST00000606769 FOXD2O60548 495 aaPredicted RBP2.12□□□□□ -2.07
SNORA28-201ENST00000606769 CTNND1O60716 968 aaKnown RBP2.12□□□□□ -2.07
SNORA28-201ENST00000606769 ZFPL1O95159 310 aa2.12□□□□□ -2.07
SNORA28-201ENST00000606769 MATN4O95460 622 aa2.12□□□□□ -2.07
SNORA28-201ENST00000606769 AHSGP02765 367 aa2.12□□□□□ -2.07
SNORA28-201ENST00000606769 FTLP02792 175 aaPredicted RBP2.12□□□□□ -2.07
SNORA28-201ENST00000606769 HRGP04196 525 aa2.12□□□□□ -2.07
SNORA28-201ENST00000606769 CD1AP06126 327 aa2.12□□□□□ -2.07
SNORA28-201ENST00000606769 ELANEP08246 267 aa2.12□□□□□ -2.07
SNORA28-201ENST00000606769 SLC5A1P13866 664 aa2.12□□□□□ -2.07
SNORA28-201ENST00000606769 IL2RBP14784 551 aa2.12□□□□□ -2.07
SNORA28-201ENST00000606769 NPR1P16066 1061 aa2.12□□□□□ -2.07
SNORA28-201ENST00000606769 HSPA6P17066 643 aa2.12□□□□□ -2.07
SNORA28-201ENST00000606769 VCAM1P19320 739 aa2.12□□□□□ -2.07
SNORA28-201ENST00000606769 ACO1P21399 889 aaKnown RBP2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms