RNA–Protein interactions for RNA: ENST00000603380.5

ZNF559-213, Transcript of zinc finger protein 559, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF559, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-213ENST00000603380 RFX8Q6ZV50 586 aa11.9□□□□□ -0.5
ZNF559-213ENST00000603380 ZNF398Q8TD17 642 aa11.9□□□□□ -0.5
ZNF559-213ENST00000603380 FAM89AQ96GI7 184 aa11.9□□□□□ -0.5
ZNF559-213ENST00000603380 SIKE1Q9BRV8 207 aa11.9□□□□□ -0.5
ZNF559-213ENST00000603380 PLA2G12BQ9BX93 195 aa11.9□□□□□ -0.5
ZNF559-213ENST00000603380 UNC45AQ9H3U1 944 aa11.9□□□□□ -0.5
ZNF559-213ENST00000603380 NPHS2Q9NP85 383 aa11.9□□□□□ -0.5
ZNF559-213ENST00000603380 DNAJC17Q9NVM6 304 aaKnown RBP11.9□□□□□ -0.5
ZNF559-213ENST00000603380 ZDHHC7Q9NXF8 308 aa11.9□□□□□ -0.5
ZNF559-213ENST00000603380 COG5Q9UP83 839 aa11.9□□□□□ -0.5
ZNF559-213ENST00000603380 ALS2Q96Q42 1657 aa11.9□□□□□ -0.5
ZNF559-213ENST00000603380 SPDYE16A6NNV3 312 aaPredicted RBP11.9□□□□□ -0.51
ZNF559-213ENST00000603380 HOXA7P31268 230 aaPredicted RBP11.9□□□□□ -0.51
ZNF559-213ENST00000603380 MFSD4BQ5TF39 518 aa11.9□□□□□ -0.51
ZNF559-213ENST00000603380 TSHZ1Q6ZSZ6 1077 aa11.9□□□□□ -0.51
ZNF559-213ENST00000603380 CCDC80Q76M96 950 aa11.9□□□□□ -0.51
ZNF559-213ENST00000603380 PHLDB2Q86SQ0 1253 aa11.9□□□□□ -0.51
ZNF559-213ENST00000603380 PRUNE1Q86TP1 453 aa11.9□□□□□ -0.51
ZNF559-213ENST00000603380 DAGLBQ8NCG7 672 aa11.9□□□□□ -0.51
ZNF559-213ENST00000603380 PRR11Q96HE9 360 aaPredicted RBP11.9□□□□□ -0.51
ZNF559-213ENST00000603380 PRICKLE1Q96MT3 831 aaPredicted RBP11.9□□□□□ -0.51
ZNF559-213ENST00000603380 TIMMDC1Q9NPL8 285 aa11.9□□□□□ -0.51
ZNF559-213ENST00000603380 NLRP2Q9NX02 1062 aa11.9□□□□□ -0.51
ZNF559-213ENST00000603380 NINJ2Q9NZG7 142 aa11.9□□□□□ -0.51
ZNF559-213ENST00000603380 WHRNQ9P202 907 aa11.9□□□□□ -0.51
ZNF559-213ENST00000603380 PLCH1Q4KWH8 1693 aa11.9□□□□□ -0.51
ZNF559-213ENST00000603380 TMEM247A6NEH6 219 aa11.89□□□□□ -0.51
ZNF559-213ENST00000603380 RGL2O15211 777 aa11.89□□□□□ -0.51
ZNF559-213ENST00000603380 HAUS5O94927 633 aa11.89□□□□□ -0.51
ZNF559-213ENST00000603380 PYGMP11217 842 aa11.89□□□□□ -0.51
ZNF559-213ENST00000603380 ABCB4P21439 1286 aa11.89□□□□□ -0.51
ZNF559-213ENST00000603380 TBL3Q12788 808 aaKnown RBP11.89□□□□□ -0.51
ZNF559-213ENST00000603380 DCTN2Q13561 401 aaKnown RBP11.89□□□□□ -0.51
ZNF559-213ENST00000603380 SIX1Q15475 284 aaPredicted RBP11.89□□□□□ -0.51
ZNF559-213ENST00000603380 ZC3H3Q8IXZ2 948 aaKnown RBP11.89□□□□□ -0.51
ZNF559-213ENST00000603380 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.89□□□□□ -0.51
ZNF559-213ENST00000603380 CDK5RAP3Q96JB5 506 aa11.89□□□□□ -0.51
ZNF559-213ENST00000603380 MAML3Q96JK9 1138 aa11.89□□□□□ -0.51
ZNF559-213ENST00000603380 TUBB6Q9BUF5 446 aa11.89□□□□□ -0.51
ZNF559-213ENST00000603380 SIX2Q9NPC8 291 aa11.89□□□□□ -0.51
ZNF559-213ENST00000603380 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.89□□□□□ -0.51
ZNF559-213ENST00000603380 CNNM1Q9NRU3 951 aa11.89□□□□□ -0.51
ZNF559-213ENST00000603380 DDX25Q9UHL0 483 aaKnown RBP11.89□□□□□ -0.51
ZNF559-213ENST00000603380 EFR3BQ9Y2G0 817 aa11.89□□□□□ -0.51
ZNF559-213ENST00000603380 PRPF4O43172 522 aaKnown RBP eCLIP11.89□□□□□ -0.51
ZNF559-213ENST00000603380 CCNT1O60563 726 aaKnown RBP11.89□□□□□ -0.51
ZNF559-213ENST00000603380 GAS8O95995 478 aa11.89□□□□□ -0.51
ZNF559-213ENST00000603380 FGRP09769 529 aa11.89□□□□□ -0.51
ZNF559-213ENST00000603380 RARBP10826 455 aa11.89□□□□□ -0.51
ZNF559-213ENST00000603380 COASYQ13057 564 aa11.89□□□□□ -0.51
ZNF559-213ENST00000603380 KLHL35Q6PF15 583 aa11.89□□□□□ -0.51
ZNF559-213ENST00000603380 KCNK18Q7Z418 384 aa11.89□□□□□ -0.51
ZNF559-213ENST00000603380 TRABD2AQ86V40 505 aa11.89□□□□□ -0.51
ZNF559-213ENST00000603380 GLYCTKQ8IVS8 523 aa11.89□□□□□ -0.51
ZNF559-213ENST00000603380 DNAJC19Q96DA6 116 aa11.89□□□□□ -0.51
ZNF559-213ENST00000603380 TBCCD1Q9NVR7 557 aa11.89□□□□□ -0.51
ZNF559-213ENST00000603380 NDE1Q9NXR1 346 aa11.89□□□□□ -0.51
ZNF559-213ENST00000603380 DNAJB4Q9UDY4 337 aa11.89□□□□□ -0.51
ZNF559-213ENST00000603380 AXIN2Q9Y2T1 843 aa11.89□□□□□ -0.51
ZNF559-213ENST00000603380 TDRKHQ9Y2W6 561 aaKnown RBP11.89□□□□□ -0.51
ZNF559-213ENST00000603380 ALG6Q9Y672 507 aa11.89□□□□□ -0.51
ZNF559-213ENST00000603380 ZMYM2Q9UBW7 1377 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 A0A1W2PRG0 241 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 THAP12O43422 761 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 USP1O94782 785 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 ALDH2P05091 517 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 SMIM18P0DKX4 95 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 PORP16435 677 aaPredicted RBP11.88□□□□□ -0.51
ZNF559-213ENST00000603380 PAX3P23760 479 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 SLC18A1P54219 525 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 LETM2Q2VYF4 491 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 EAPPQ56P03 285 aaPredicted RBP11.88□□□□□ -0.51
ZNF559-213ENST00000603380 RBM44Q6ZP01 1051 aaKnown RBP11.88□□□□□ -0.51
ZNF559-213ENST00000603380 TRIM67Q6ZTA4 783 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 RAPH1Q70E73 1250 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 ADGRA1Q86SQ6 560 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 PDSS2Q86YH6 399 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 ZBED8Q8IZ13 594 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 RFWD2Q8NHY2 731 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 FNDC8Q8TC99 324 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 GREM2Q9H772 168 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 PFDN4Q9NQP4 134 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 FAIMQ9NVQ4 179 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.88□□□□□ -0.51
ZNF559-213ENST00000603380 CASZ1Q86V15 1759 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 PGM3O95394 542 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 GGPS1O95749 300 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 PGM1P36871 562 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 MED21Q13503 144 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 SLC1A5Q15758 541 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 KLHDC10Q6PID8 442 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 KSR1Q8IVT5 923 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 SYNE4Q8N205 404 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 OR6Y1Q8NGX8 325 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 RAD54LQ92698 747 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 HSPBAP1Q96EW2 488 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 RBM38Q9H0Z9 239 aaKnown RBP11.88□□□□□ -0.51
ZNF559-213ENST00000603380 KCTD10Q9H3F6 313 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 DCTN4Q9UJW0 460 aa11.88□□□□□ -0.51
ZNF559-213ENST00000603380 HDAC9Q9UKV0 1011 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms