RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 NELL2Q99435 816 aa17.81■□□□□ 0.44
SSBP4-211ENST00000601614 AGXT2Q9BYV1 514 aa17.81■□□□□ 0.44
SSBP4-211ENST00000601614 C22orf23Q9BZE7 217 aa17.81■□□□□ 0.44
SSBP4-211ENST00000601614 PARP2Q9UGN5 583 aa17.81■□□□□ 0.44
SSBP4-211ENST00000601614 PDCD11Q14690 1871 aaKnown RBP17.81■□□□□ 0.44
SSBP4-211ENST00000601614 XYLBO75191 536 aa17.8■□□□□ 0.44
SSBP4-211ENST00000601614 POU2F2P09086 479 aa17.8■□□□□ 0.44
SSBP4-211ENST00000601614 CTTNQ14247 550 aaKnown RBP17.8■□□□□ 0.44
SSBP4-211ENST00000601614 TANGO2Q6ICL3 276 aa17.8■□□□□ 0.44
SSBP4-211ENST00000601614 ZNF852Q6ZMS4 543 aa17.8■□□□□ 0.44
SSBP4-211ENST00000601614 HAS1Q92839 578 aa17.8■□□□□ 0.44
SSBP4-211ENST00000601614 DYDC2Q96IM9 177 aa17.8■□□□□ 0.44
SSBP4-211ENST00000601614 AIFM3Q96NN9 605 aa17.8■□□□□ 0.44
SSBP4-211ENST00000601614 SLKQ9H2G2 1235 aaPredicted RBP17.8■□□□□ 0.44
SSBP4-211ENST00000601614 NDRG2Q9UN36 371 aaKnown RBP17.8■□□□□ 0.44
SSBP4-211ENST00000601614 ZMYM2Q9UBW7 1377 aa17.79■□□□□ 0.44
SSBP4-211ENST00000601614 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.79■□□□□ 0.44
SSBP4-211ENST00000601614 PTGESO14684 152 aa17.79■□□□□ 0.44
SSBP4-211ENST00000601614 NCAM2O15394 837 aa17.79■□□□□ 0.44
SSBP4-211ENST00000601614 DKC1O60832 514 aaKnown RBP eCLIP17.79■□□□□ 0.44
SSBP4-211ENST00000601614 ECI2O75521 394 aa17.79■□□□□ 0.44
SSBP4-211ENST00000601614 TUSC3Q13454 348 aa17.79■□□□□ 0.44
SSBP4-211ENST00000601614 RAB33AQ14088 237 aa17.79■□□□□ 0.44
SSBP4-211ENST00000601614 EPHA7Q15375 998 aa17.79■□□□□ 0.44
SSBP4-211ENST00000601614 NAB2Q15742 525 aa17.79■□□□□ 0.44
SSBP4-211ENST00000601614 DAGLBQ8NCG7 672 aa17.79■□□□□ 0.44
SSBP4-211ENST00000601614 NETO1Q8TDF5 533 aa17.79■□□□□ 0.44
SSBP4-211ENST00000601614 JAKMIP1Q96N16 626 aaKnown RBP17.79■□□□□ 0.44
SSBP4-211ENST00000601614 FAM126AQ9BYI3 521 aaPredicted RBP17.79■□□□□ 0.44
SSBP4-211ENST00000601614 CHRDQ9H2X0 955 aa17.79■□□□□ 0.44
SSBP4-211ENST00000601614 KCNH3Q9ULD8 1083 aa17.79■□□□□ 0.44
SSBP4-211ENST00000601614 TTLL13PA6NNM8 815 aa17.78■□□□□ 0.44
SSBP4-211ENST00000601614 GDF9O60383 454 aa17.78■□□□□ 0.44
SSBP4-211ENST00000601614 CEBPBP17676 345 aa17.78■□□□□ 0.44
SSBP4-211ENST00000601614 GLRA2P23416 452 aa17.78■□□□□ 0.44
SSBP4-211ENST00000601614 FCARP24071 287 aa17.78■□□□□ 0.44
SSBP4-211ENST00000601614 PDIA3P30101 505 aaKnown RBP17.78■□□□□ 0.44
SSBP4-211ENST00000601614 OR1D2P34982 312 aa17.78■□□□□ 0.44
SSBP4-211ENST00000601614 CYP4A11Q02928 519 aa17.78■□□□□ 0.44
SSBP4-211ENST00000601614 POU5F1BQ06416 359 aa17.78■□□□□ 0.44
SSBP4-211ENST00000601614 SPIRE1Q08AE8 756 aa17.78■□□□□ 0.44
SSBP4-211ENST00000601614 MXD4Q14582 209 aaPredicted RBP17.78■□□□□ 0.44
SSBP4-211ENST00000601614 LAIR1Q6GTX8 287 aa17.78■□□□□ 0.44
SSBP4-211ENST00000601614 SLC27A1Q6PCB7 646 aa17.78■□□□□ 0.44
SSBP4-211ENST00000601614 HACE1Q8IYU2 909 aa17.78■□□□□ 0.44
SSBP4-211ENST00000601614 FBXL16Q8N461 479 aa17.78■□□□□ 0.44
SSBP4-211ENST00000601614 KCNB2Q92953 911 aa17.78■□□□□ 0.44
SSBP4-211ENST00000601614 CHAMP1Q96JM3 812 aa17.78■□□□□ 0.44
SSBP4-211ENST00000601614 FAM20AQ96MK3 541 aa17.78■□□□□ 0.44
SSBP4-211ENST00000601614 MRPS23Q9Y3D9 190 aaKnown RBP17.78■□□□□ 0.44
SSBP4-211ENST00000601614 GREB1Q4ZG55 1949 aa17.78■□□□□ 0.44
SSBP4-211ENST00000601614 BAHCC1Q9P281 2608 aa17.78■□□□□ 0.44
SSBP4-211ENST00000601614 SDK1Q7Z5N4 2213 aa17.78■□□□□ 0.44
SSBP4-211ENST00000601614 A0A1B0GUA9 196 aa17.77■□□□□ 0.44
SSBP4-211ENST00000601614 RHOP08100 348 aa17.77■□□□□ 0.44
SSBP4-211ENST00000601614 ARL2P36404 184 aa17.77■□□□□ 0.44
SSBP4-211ENST00000601614 NCBP1Q09161 790 aaKnown RBP17.77■□□□□ 0.44
SSBP4-211ENST00000601614 GRM2Q14416 872 aa17.77■□□□□ 0.44
SSBP4-211ENST00000601614 UVSSAQ2YD98 709 aa17.77■□□□□ 0.44
SSBP4-211ENST00000601614 OTUD6AQ7L8S5 288 aa17.77■□□□□ 0.44
SSBP4-211ENST00000601614 SNX14Q9Y5W7 946 aa17.77■□□□□ 0.44
SSBP4-211ENST00000601614 RETP07949 1114 aa17.76■□□□□ 0.43
SSBP4-211ENST00000601614 RPS6KB1P23443 525 aa17.76■□□□□ 0.43
SSBP4-211ENST00000601614 IRX6P78412 446 aaPredicted RBP17.76■□□□□ 0.43
SSBP4-211ENST00000601614 DMWDQ09019 674 aa17.76■□□□□ 0.43
SSBP4-211ENST00000601614 SRSF5Q13243 272 aaKnown RBP17.76■□□□□ 0.43
SSBP4-211ENST00000601614 TFDP1Q14186 410 aa17.76■□□□□ 0.43
SSBP4-211ENST00000601614 GAS6Q14393 721 aa17.76■□□□□ 0.43
SSBP4-211ENST00000601614 NCAPH2Q6IBW4 605 aa17.76■□□□□ 0.43
SSBP4-211ENST00000601614 BLOC1S2Q6QNY1 142 aa17.76■□□□□ 0.43
SSBP4-211ENST00000601614 MAMSTRQ6ZN01 415 aa17.76■□□□□ 0.43
SSBP4-211ENST00000601614 PRR23CQ6ZRP0 262 aa17.76■□□□□ 0.43
SSBP4-211ENST00000601614 PRR23BQ6ZRT6 265 aa17.76■□□□□ 0.43
SSBP4-211ENST00000601614 DNASE1L2Q92874 299 aa17.76■□□□□ 0.43
SSBP4-211ENST00000601614 ELSPBP1Q96BH3 223 aa17.76■□□□□ 0.43
SSBP4-211ENST00000601614 NFKBIZQ9BYH8 718 aa17.76■□□□□ 0.43
SSBP4-211ENST00000601614 ZSWIM4Q9H7M6 989 aa17.76■□□□□ 0.43
SSBP4-211ENST00000601614 SEMA4GQ9NTN9 838 aa17.76■□□□□ 0.43
SSBP4-211ENST00000601614 MTRRQ9UBK8 725 aa17.76■□□□□ 0.43
SSBP4-211ENST00000601614 KCNJ14Q9UNX9 436 aa17.76■□□□□ 0.43
SSBP4-211ENST00000601614 MRPS17Q9Y2R5 130 aaKnown RBP17.76■□□□□ 0.43
SSBP4-211ENST00000601614 HRO43593 1189 aa17.75■□□□□ 0.43
SSBP4-211ENST00000601614 SLITRK3O94933 977 aa17.75■□□□□ 0.43
SSBP4-211ENST00000601614 FGFR3P22607 806 aa17.75■□□□□ 0.43
SSBP4-211ENST00000601614 EVCP57679 992 aa17.75■□□□□ 0.43
SSBP4-211ENST00000601614 SATB1Q01826 763 aa17.75■□□□□ 0.43
SSBP4-211ENST00000601614 BMP2KLQ5H9B9 411 aa17.75■□□□□ 0.43
SSBP4-211ENST00000601614 PRSS36Q5K4E3 855 aa17.75■□□□□ 0.43
SSBP4-211ENST00000601614 CD300LGQ6UXG3 332 aa17.75■□□□□ 0.43
SSBP4-211ENST00000601614 KRT25Q7Z3Z0 450 aa17.75■□□□□ 0.43
SSBP4-211ENST00000601614 POTEDQ86YR6 584 aa17.75■□□□□ 0.43
SSBP4-211ENST00000601614 CELF5Q8N6W0 485 aaKnown RBP17.75■□□□□ 0.43
SSBP4-211ENST00000601614 TCEAL4Q96EI5 215 aa17.75■□□□□ 0.43
SSBP4-211ENST00000601614 SNTG2Q9NY99 539 aa17.75■□□□□ 0.43
SSBP4-211ENST00000601614 GDE1Q9NZC3 331 aa17.75■□□□□ 0.43
SSBP4-211ENST00000601614 RAB23Q9ULC3 237 aa17.75■□□□□ 0.43
SSBP4-211ENST00000601614 CDY1Q9Y6F8 540 aa17.75■□□□□ 0.43
SSBP4-211ENST00000601614 SPAG17Q6Q759 2223 aa17.75■□□□□ 0.43
SSBP4-211ENST00000601614 NCANO14594 1321 aa17.74■□□□□ 0.43
SSBP4-211ENST00000601614 RECQL4O94761 1208 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms