RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 EMILIN2Q9BXX0 1053 aa18.82■□□□□ 0.6
HERC3-214ENST00000601319 CXCL16Q9H2A7 254 aa18.82■□□□□ 0.6
HERC3-214ENST00000601319 CHST7Q9NS84 486 aa18.82■□□□□ 0.6
HERC3-214ENST00000601319 DZANK1Q9NVP4 752 aa18.82■□□□□ 0.6
HERC3-214ENST00000601319 ANKFY1Q9P2R3 1169 aa18.82■□□□□ 0.6
HERC3-214ENST00000601319 TFIP11Q9UBB9 837 aaKnown RBP18.82■□□□□ 0.6
HERC3-214ENST00000601319 SEL1LQ9UBV2 794 aa18.82■□□□□ 0.6
HERC3-214ENST00000601319 TBX20Q9UMR3 447 aa18.82■□□□□ 0.6
HERC3-214ENST00000601319 A0A087X0B3 334 aa18.81■□□□□ 0.6
HERC3-214ENST00000601319 TMEM189-UBE2V1I3L0A0 370 aa18.81■□□□□ 0.6
HERC3-214ENST00000601319 CUTAO60888 179 aa18.81■□□□□ 0.6
HERC3-214ENST00000601319 KCNE1P15382 129 aa18.81■□□□□ 0.6
HERC3-214ENST00000601319 CA8P35219 290 aa18.81■□□□□ 0.6
HERC3-214ENST00000601319 GTF2BQ00403 316 aa18.81■□□□□ 0.6
HERC3-214ENST00000601319 DSG1Q02413 1049 aa18.81■□□□□ 0.6
HERC3-214ENST00000601319 SV2BQ7L1I2 683 aa18.81■□□□□ 0.6
HERC3-214ENST00000601319 ZBTB33Q86T24 672 aa18.81■□□□□ 0.6
HERC3-214ENST00000601319 MAP4K3Q8IVH8 894 aa18.81■□□□□ 0.6
HERC3-214ENST00000601319 SLC22A17Q8WUG5 538 aa18.81■□□□□ 0.6
HERC3-214ENST00000601319 SUSD6Q92537 303 aa18.81■□□□□ 0.6
HERC3-214ENST00000601319 DDX12PQ92771 950 aa18.81■□□□□ 0.6
HERC3-214ENST00000601319 HVCN1Q96D96 273 aa18.81■□□□□ 0.6
HERC3-214ENST00000601319 UROC1Q96N76 676 aa18.81■□□□□ 0.6
HERC3-214ENST00000601319 ACAP3Q96P50 834 aa18.81■□□□□ 0.6
HERC3-214ENST00000601319 CNTN3Q9P232 1028 aa18.81■□□□□ 0.6
HERC3-214ENST00000601319 USP15Q9Y4E8 981 aaPredicted RBP18.81■□□□□ 0.6
HERC3-214ENST00000601319 TRIOO75962 3097 aa18.8■□□□□ 0.6
HERC3-214ENST00000601319 SMIM28A0A1B0GU29 152 aa18.8■□□□□ 0.6
HERC3-214ENST00000601319 CASTOR2A6NHX0 329 aa18.8■□□□□ 0.6
HERC3-214ENST00000601319 C19orf67A6NJJ6 358 aa18.8■□□□□ 0.6
HERC3-214ENST00000601319 HNRNPDLO14979 420 aaKnown RBP18.8■□□□□ 0.6
HERC3-214ENST00000601319 CLDN3O15551 220 aa18.8■□□□□ 0.6
HERC3-214ENST00000601319 KIF4AO95239 1232 aa18.8■□□□□ 0.6
HERC3-214ENST00000601319 C1RP00736 705 aa18.8■□□□□ 0.6
HERC3-214ENST00000601319 CNPP09543 421 aaKnown RBP18.8■□□□□ 0.6
HERC3-214ENST00000601319 GAP43P17677 238 aa18.8■□□□□ 0.6
HERC3-214ENST00000601319 TPRNQ4KMQ1 711 aa18.8■□□□□ 0.6
HERC3-214ENST00000601319 FOXD4L5Q5VV16 416 aaPredicted RBP18.8■□□□□ 0.6
HERC3-214ENST00000601319 KIAA0319Q5VV43 1072 aa18.8■□□□□ 0.6
HERC3-214ENST00000601319 LLGL2Q6P1M3 1020 aa18.8■□□□□ 0.6
HERC3-214ENST00000601319 SYCE2Q6PIF2 218 aa18.8■□□□□ 0.6
HERC3-214ENST00000601319 TMEM87AQ8NBN3 555 aa18.8■□□□□ 0.6
HERC3-214ENST00000601319 FOXD4L4Q8WXT5 416 aaPredicted RBP18.8■□□□□ 0.6
HERC3-214ENST00000601319 DNAJC19Q96DA6 116 aa18.8■□□□□ 0.6
HERC3-214ENST00000601319 BICD1Q96G01 975 aa18.8■□□□□ 0.6
HERC3-214ENST00000601319 ZBTB45Q96K62 511 aaPredicted RBP18.8■□□□□ 0.6
HERC3-214ENST00000601319 PAAF1Q9BRP4 392 aa18.8■□□□□ 0.6
HERC3-214ENST00000601319 GPR62Q9BZJ7 368 aa18.8■□□□□ 0.6
HERC3-214ENST00000601319 S1PR5Q9H228 398 aa18.8■□□□□ 0.6
HERC3-214ENST00000601319 CUEDC2Q9H467 287 aa18.8■□□□□ 0.6
HERC3-214ENST00000601319 RXFP1Q9HBX9 757 aa18.8■□□□□ 0.6
HERC3-214ENST00000601319 SLC38A7Q9NVC3 462 aa18.8■□□□□ 0.6
HERC3-214ENST00000601319 CFAP45Q9UL16 551 aa18.8■□□□□ 0.6
HERC3-214ENST00000601319 MYMKA6NI61 221 aa18.79■□□□□ 0.6
HERC3-214ENST00000601319 LIG4P49917 911 aa18.79■□□□□ 0.6
HERC3-214ENST00000601319 CLCN4P51793 760 aa18.79■□□□□ 0.6
HERC3-214ENST00000601319 OSTNP61366 133 aa18.79■□□□□ 0.6
HERC3-214ENST00000601319 CREMQ03060 361 aa18.79■□□□□ 0.6
HERC3-214ENST00000601319 ELAVL2Q12926 359 aaKnown RBP18.79■□□□□ 0.6
HERC3-214ENST00000601319 E2F4Q16254 413 aa18.79■□□□□ 0.6
HERC3-214ENST00000601319 KYAT1Q16773 422 aa18.79■□□□□ 0.6
HERC3-214ENST00000601319 USP41Q3LFD5 358 aa18.79■□□□□ 0.6
HERC3-214ENST00000601319 GLRA4Q5JXX5 417 aa18.79■□□□□ 0.6
HERC3-214ENST00000601319 AXDND1Q5T1B0 1012 aaPredicted RBP18.79■□□□□ 0.6
HERC3-214ENST00000601319 TAS1R1Q7RTX1 841 aa18.79■□□□□ 0.6
HERC3-214ENST00000601319 GJD3Q8N144 294 aa18.79■□□□□ 0.6
HERC3-214ENST00000601319 SPRYD3Q8NCJ5 442 aa18.79■□□□□ 0.6
HERC3-214ENST00000601319 KLHL5Q96PQ7 755 aa18.79■□□□□ 0.6
HERC3-214ENST00000601319 TNMDQ9H2S6 317 aa18.79■□□□□ 0.6
HERC3-214ENST00000601319 ZHX3Q9H4I2 956 aa18.79■□□□□ 0.6
HERC3-214ENST00000601319 CD320Q9NPF0 282 aa18.79■□□□□ 0.6
HERC3-214ENST00000601319 OLFML3Q9NRN5 406 aa18.79■□□□□ 0.6
HERC3-214ENST00000601319 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.79■□□□□ 0.6
HERC3-214ENST00000601319 CACNG4Q9UBN1 327 aa18.79■□□□□ 0.6
HERC3-214ENST00000601319 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.79■□□□□ 0.6
HERC3-214ENST00000601319 FRMD3A2A2Y4 597 aa18.78■□□□□ 0.6
HERC3-214ENST00000601319 FAM189A1O60320 539 aa18.78■□□□□ 0.6
HERC3-214ENST00000601319 TADA2AO75478 443 aa18.78■□□□□ 0.6
HERC3-214ENST00000601319 PPP1R37O75864 691 aa18.78■□□□□ 0.6
HERC3-214ENST00000601319 ADH1AP07327 375 aa18.78■□□□□ 0.6
HERC3-214ENST00000601319 HARSP12081 509 aaKnown RBP18.78■□□□□ 0.6
HERC3-214ENST00000601319 NMT1P30419 496 aaKnown RBP18.78■□□□□ 0.6
HERC3-214ENST00000601319 ITIH3Q06033 890 aa18.78■□□□□ 0.6
HERC3-214ENST00000601319 SHC4Q6S5L8 630 aa18.78■□□□□ 0.6
HERC3-214ENST00000601319 DYMQ7RTS9 669 aa18.78■□□□□ 0.6
HERC3-214ENST00000601319 SFR1Q86XK3 245 aa18.78■□□□□ 0.6
HERC3-214ENST00000601319 HAPLN2Q9GZV7 340 aa18.78■□□□□ 0.6
HERC3-214ENST00000601319 A0A0B4J269 797 aa18.77■□□□□ 0.6
HERC3-214ENST00000601319 C2CD2LO14523 706 aa18.77■□□□□ 0.6
HERC3-214ENST00000601319 MEFVO15553 781 aaPredicted RBP18.77■□□□□ 0.6
HERC3-214ENST00000601319 CLTAP09496 248 aa18.77■□□□□ 0.6
HERC3-214ENST00000601319 EPCAMP16422 314 aa18.77■□□□□ 0.6
HERC3-214ENST00000601319 CBX2Q14781 532 aaPredicted RBP18.77■□□□□ 0.6
HERC3-214ENST00000601319 UPP1Q16831 310 aa18.77■□□□□ 0.6
HERC3-214ENST00000601319 KIAA1841Q6NSI8 718 aa18.77■□□□□ 0.6
HERC3-214ENST00000601319 ZNF720Q7Z2F6 126 aa18.77■□□□□ 0.6
HERC3-214ENST00000601319 PDILTQ8N807 584 aa18.77■□□□□ 0.6
HERC3-214ENST00000601319 RABGGTAQ92696 567 aa18.77■□□□□ 0.6
HERC3-214ENST00000601319 DDX27Q96GQ7 796 aaKnown RBP18.77■□□□□ 0.6
HERC3-214ENST00000601319 ZMAT2Q96NC0 199 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms