RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 EIF2AQ9BY44 585 aaKnown RBP24.45■■□□□ 1.5
IRF3-228ENST00000601291 EDEM3Q9BZQ6 932 aa24.45■■□□□ 1.5
IRF3-228ENST00000601291 INTS2Q9H0H0 1204 aaKnown RBP24.45■■□□□ 1.5
IRF3-228ENST00000601291 COL6A1P12109 1028 aa24.44■■□□□ 1.5
IRF3-228ENST00000601291 YARSP54577 528 aaKnown RBP24.44■■□□□ 1.5
IRF3-228ENST00000601291 LPIN1Q14693 890 aa24.44■■□□□ 1.5
IRF3-228ENST00000601291 ARID5BQ14865 1188 aa24.44■■□□□ 1.5
IRF3-228ENST00000601291 C1orf53Q5VUE5 145 aa24.44■■□□□ 1.5
IRF3-228ENST00000601291 SV2AQ7L0J3 742 aa24.44■■□□□ 1.5
IRF3-228ENST00000601291 ANKRD33Q7Z3H0 272 aa24.44■■□□□ 1.5
IRF3-228ENST00000601291 CACNA2D4Q7Z3S7 1137 aa24.44■■□□□ 1.5
IRF3-228ENST00000601291 TMEM192Q8IY95 271 aa24.44■■□□□ 1.5
IRF3-228ENST00000601291 TC2NQ8N9U0 490 aa24.44■■□□□ 1.5
IRF3-228ENST00000601291 FBXL13Q8NEE6 735 aa24.44■■□□□ 1.5
IRF3-228ENST00000601291 CACTINQ8WUQ7 758 aaKnown RBP24.44■■□□□ 1.5
IRF3-228ENST00000601291 ERVK-5Q9HDB9 667 aa24.44■■□□□ 1.5
IRF3-228ENST00000601291 CEP72Q9P209 647 aa24.44■■□□□ 1.5
IRF3-228ENST00000601291 DCDC2CA8MYV0 355 aa24.43■■□□□ 1.5
IRF3-228ENST00000601291 SELPP16109 830 aa24.43■■□□□ 1.5
IRF3-228ENST00000601291 ZSCAN20P17040 1043 aaPredicted RBP24.43■■□□□ 1.5
IRF3-228ENST00000601291 CD52P31358 61 aa24.43■■□□□ 1.5
IRF3-228ENST00000601291 KRT9P35527 623 aa24.43■■□□□ 1.5
IRF3-228ENST00000601291 EPC2Q52LR7 807 aa24.43■■□□□ 1.5
IRF3-228ENST00000601291 LMBRD2Q68DH5 695 aaPredicted RBP24.43■■□□□ 1.5
IRF3-228ENST00000601291 CD302Q8IX05 232 aa24.43■■□□□ 1.5
IRF3-228ENST00000601291 EHBP1Q8NDI1 1231 aa24.43■■□□□ 1.5
IRF3-228ENST00000601291 ASB7Q9H672 318 aa24.43■■□□□ 1.5
IRF3-228ENST00000601291 PADI3Q9ULW8 664 aa24.43■■□□□ 1.5
IRF3-228ENST00000601291 COQ4Q9Y3A0 265 aa24.43■■□□□ 1.5
IRF3-228ENST00000601291 DAAM1Q9Y4D1 1078 aa24.43■■□□□ 1.5
IRF3-228ENST00000601291 EPHB6O15197 1021 aa24.42■■□□□ 1.5
IRF3-228ENST00000601291 ZBED6P86452 979 aa24.42■■□□□ 1.5
IRF3-228ENST00000601291 GOLGA8FQ08AF8 430 aa24.42■■□□□ 1.5
IRF3-228ENST00000601291 GOLGA8DPQ0D2H9 430 aa24.42■■□□□ 1.5
IRF3-228ENST00000601291 BIRC3Q13489 604 aa24.42■■□□□ 1.5
IRF3-228ENST00000601291 TSR1Q2NL82 804 aaKnown RBP24.42■■□□□ 1.5
IRF3-228ENST00000601291 ZACNQ401N2 412 aa24.42■■□□□ 1.5
IRF3-228ENST00000601291 UBXN11Q5T124 520 aa24.42■■□□□ 1.5
IRF3-228ENST00000601291 C15orf39Q6ZRI6 1047 aa24.42■■□□□ 1.5
IRF3-228ENST00000601291 LRRC8DQ7L1W4 858 aa24.42■■□□□ 1.5
IRF3-228ENST00000601291 CCDC112Q8NEF3 446 aa24.42■■□□□ 1.5
IRF3-228ENST00000601291 DIS3LQ8TF46 1054 aaKnown RBP24.42■■□□□ 1.5
IRF3-228ENST00000601291 PANX2Q96RD6 677 aa24.42■■□□□ 1.5
IRF3-228ENST00000601291 C11orf49Q9H6J7 331 aa24.42■■□□□ 1.5
IRF3-228ENST00000601291 AGO3Q9H9G7 860 aaKnown RBP24.42■■□□□ 1.5
IRF3-228ENST00000601291 PITPNM1O00562 1244 aa24.42■■□□□ 1.5
IRF3-228ENST00000601291 ACTN1P12814 892 aa24.42■■□□□ 1.5
IRF3-228ENST00000601291 POLR2FP61218 127 aaKnown RBP24.42■■□□□ 1.5
IRF3-228ENST00000601291 KLHDC7AQ5VTJ3 777 aa24.42■■□□□ 1.5
IRF3-228ENST00000601291 TRAF7Q6Q0C0 670 aa24.42■■□□□ 1.5
IRF3-228ENST00000601291 ZNF516Q92618 1163 aa24.42■■□□□ 1.5
IRF3-228ENST00000601291 TOX2Q96NM4 488 aa24.42■■□□□ 1.5
IRF3-228ENST00000601291 GANQ9H2C0 597 aa24.42■■□□□ 1.5
IRF3-228ENST00000601291 PLEKHA5Q9HAU0 1116 aa24.42■■□□□ 1.5
IRF3-228ENST00000601291 ABHD10Q9NUJ1 306 aa24.42■■□□□ 1.5
IRF3-228ENST00000601291 SNTG2Q9NY99 539 aa24.42■■□□□ 1.5
IRF3-228ENST00000601291 FBXL5Q9UKA1 691 aa24.42■■□□□ 1.5
IRF3-228ENST00000601291 PTPRJQ12913 1337 aa24.41■■□□□ 1.5
IRF3-228ENST00000601291 NOL4O94818 638 aa24.41■■□□□ 1.5
IRF3-228ENST00000601291 TNNC2P02585 160 aa24.41■■□□□ 1.5
IRF3-228ENST00000601291 C4BPAP04003 597 aaKnown RBP24.41■■□□□ 1.5
IRF3-228ENST00000601291 TMEM191BP0C7N4 346 aa24.41■■□□□ 1.5
IRF3-228ENST00000601291 RFX1P22670 979 aa24.41■■□□□ 1.5
IRF3-228ENST00000601291 DUOXA2Q1HG44 320 aa24.41■■□□□ 1.5
IRF3-228ENST00000601291 SLC10A6Q3KNW5 377 aa24.41■■□□□ 1.5
IRF3-228ENST00000601291 HACE1Q8IYU2 909 aa24.41■■□□□ 1.5
IRF3-228ENST00000601291 OR8K1Q8NGG5 319 aa24.41■■□□□ 1.5
IRF3-228ENST00000601291 TAS1R2Q8TE23 839 aa24.41■■□□□ 1.5
IRF3-228ENST00000601291 ANKRD36BP1Q96IX9 119 aa24.41■■□□□ 1.5
IRF3-228ENST00000601291 ZNF830Q96NB3 372 aaPredicted RBP24.41■■□□□ 1.5
IRF3-228ENST00000601291 MCOLN1Q9GZU1 580 aa24.41■■□□□ 1.5
IRF3-228ENST00000601291 NXF3Q9H4D5 531 aaKnown RBP24.41■■□□□ 1.5
IRF3-228ENST00000601291 RAB20Q9NX57 234 aa24.41■■□□□ 1.5
IRF3-228ENST00000601291 LACTBL1A8MY62 500 aa24.4■■□□□ 1.5
IRF3-228ENST00000601291 PHACTR2O75167 634 aa24.4■■□□□ 1.5
IRF3-228ENST00000601291 UCHL3P15374 230 aa24.4■■□□□ 1.5
IRF3-228ENST00000601291 PIK3CAP42336 1068 aa24.4■■□□□ 1.5
IRF3-228ENST00000601291 TFAMQ00059 246 aaKnown RBP24.4■■□□□ 1.5
IRF3-228ENST00000601291 TRIM60Q495X7 471 aa24.4■■□□□ 1.5
IRF3-228ENST00000601291 TDRD10Q5VZ19 366 aaKnown RBP24.4■■□□□ 1.5
IRF3-228ENST00000601291 NT5DC4Q86YG4 428 aa24.4■■□□□ 1.5
IRF3-228ENST00000601291 OR5B17Q8NGF7 314 aa24.4■■□□□ 1.5
IRF3-228ENST00000601291 LMO3Q8TAP4 145 aa24.4■■□□□ 1.5
IRF3-228ENST00000601291 DNAJC7Q99615 494 aa24.4■■□□□ 1.5
IRF3-228ENST00000601291 NUCKS1Q9H1E3 243 aaKnown RBP24.4■■□□□ 1.5
IRF3-228ENST00000601291 KCNF1Q9H3M0 494 aa24.4■■□□□ 1.5
IRF3-228ENST00000601291 SIX2Q9NPC8 291 aa24.4■■□□□ 1.5
IRF3-228ENST00000601291 APEX2Q9UBZ4 518 aa24.4■■□□□ 1.5
IRF3-228ENST00000601291 IPPQ9Y573 584 aa24.4■■□□□ 1.5
IRF3-228ENST00000601291 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.4■■□□□ 1.5
IRF3-228ENST00000601291 RNF225M0QZC1 329 aaPredicted RBP24.39■■□□□ 1.5
IRF3-228ENST00000601291 RAB27AP51159 221 aa24.39■■□□□ 1.5
IRF3-228ENST00000601291 APBA1Q02410 837 aa24.39■■□□□ 1.5
IRF3-228ENST00000601291 LRMPQ12912 555 aa24.39■■□□□ 1.5
IRF3-228ENST00000601291 DPY19L2P1Q6NXN4 242 aa24.39■■□□□ 1.5
IRF3-228ENST00000601291 MTMR12Q9C0I1 747 aa24.39■■□□□ 1.5
IRF3-228ENST00000601291 NLRC4Q9NPP4 1024 aa24.39■■□□□ 1.5
IRF3-228ENST00000601291 FAM105AQ9NUU6 356 aa24.39■■□□□ 1.5
IRF3-228ENST00000601291 ZC3H11AO75152 810 aaKnown RBP eCLIP24.38■■□□□ 1.495e-8■■■■□ 20.6
IRF3-228ENST00000601291 JADE1Q6IE81 842 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms