RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 RBAKQ9NYW8 714 aaPredicted RBP21.77■■□□□ 1.08
SHKBP1-222ENST00000600320 HCSTQ9UBK5 93 aa21.77■■□□□ 1.08
SHKBP1-222ENST00000600320 PLAGL2Q9UPG8 496 aa21.77■■□□□ 1.08
SHKBP1-222ENST00000600320 COLQQ9Y215 455 aaPredicted RBP21.77■■□□□ 1.08
SHKBP1-222ENST00000600320 FNDC1Q4ZHG4 1894 aaPredicted RBP21.77■■□□□ 1.08
SHKBP1-222ENST00000600320 ZNF233A6NK53 670 aa21.76■■□□□ 1.07
SHKBP1-222ENST00000600320 TBKBP1A7MCY6 615 aa21.76■■□□□ 1.07
SHKBP1-222ENST00000600320 CITO14578 2027 aa21.76■■□□□ 1.07
SHKBP1-222ENST00000600320 CETN3O15182 167 aa21.76■■□□□ 1.07
SHKBP1-222ENST00000600320 INPPL1O15357 1258 aa21.76■■□□□ 1.07
SHKBP1-222ENST00000600320 HOXA2O43364 376 aa21.76■■□□□ 1.07
SHKBP1-222ENST00000600320 ANK1P16157 1881 aa21.76■■□□□ 1.07
SHKBP1-222ENST00000600320 SCNN1GP51170 649 aa21.76■■□□□ 1.07
SHKBP1-222ENST00000600320 SPAG1Q07617 926 aa21.76■■□□□ 1.07
SHKBP1-222ENST00000600320 GLRA4Q5JXX5 417 aa21.76■■□□□ 1.07
SHKBP1-222ENST00000600320 CSGALNACT2Q8N6G5 542 aa21.76■■□□□ 1.07
SHKBP1-222ENST00000600320 PLEKHO2Q8TD55 490 aa21.76■■□□□ 1.07
SHKBP1-222ENST00000600320 FAM212AQ96EL1 285 aa21.76■■□□□ 1.07
SHKBP1-222ENST00000600320 ZMAT2Q96NC0 199 aaKnown RBP21.76■■□□□ 1.07
SHKBP1-222ENST00000600320 KIAA1586Q9HCI6 787 aa21.76■■□□□ 1.07
SHKBP1-222ENST00000600320 TRIP11Q15643 1979 aa21.76■■□□□ 1.07
SHKBP1-222ENST00000600320 RALGAPA2Q2PPJ7 1873 aa21.75■■□□□ 1.07
SHKBP1-222ENST00000600320 POMCP01189 267 aa21.75■■□□□ 1.07
SHKBP1-222ENST00000600320 POU5F1Q01860 360 aaKnown RBP21.75■■□□□ 1.07
SHKBP1-222ENST00000600320 CYP24A1Q07973 514 aa21.75■■□□□ 1.07
SHKBP1-222ENST00000600320 NOMO2Q5JPE7 1267 aa21.75■■□□□ 1.07
SHKBP1-222ENST00000600320 ABI1Q8IZP0 508 aa21.75■■□□□ 1.07
SHKBP1-222ENST00000600320 TMEM130Q8N3G9 435 aa21.75■■□□□ 1.07
SHKBP1-222ENST00000600320 FAM84AQ96KN4 292 aa21.75■■□□□ 1.07
SHKBP1-222ENST00000600320 MFSD14AQ96MC6 490 aa21.75■■□□□ 1.07
SHKBP1-222ENST00000600320 RPS6KC1Q96S38 1066 aa21.75■■□□□ 1.07
SHKBP1-222ENST00000600320 YME1L1Q96TA2 773 aa21.75■■□□□ 1.07
SHKBP1-222ENST00000600320 ZBED2Q9BTP6 218 aa21.75■■□□□ 1.07
SHKBP1-222ENST00000600320 SRRTQ9BXP5 876 aaKnown RBP21.75■■□□□ 1.07
SHKBP1-222ENST00000600320 PLEKHA5Q9HAU0 1116 aa21.75■■□□□ 1.07
SHKBP1-222ENST00000600320 TOPORSQ9NS56 1045 aaPredicted RBP21.75■■□□□ 1.07
SHKBP1-222ENST00000600320 CNTN3Q9P232 1028 aa21.75■■□□□ 1.07
SHKBP1-222ENST00000600320 LCHNA4D1U4 455 aa21.74■■□□□ 1.07
SHKBP1-222ENST00000600320 B4GALT3O60512 393 aa21.74■■□□□ 1.07
SHKBP1-222ENST00000600320 MYOGP15173 224 aa21.74■■□□□ 1.07
SHKBP1-222ENST00000600320 PPP2R3AQ06190 1150 aa21.74■■□□□ 1.07
SHKBP1-222ENST00000600320 EFCAB13Q8IY85 973 aa21.74■■□□□ 1.07
SHKBP1-222ENST00000600320 FAM186BQ8IYM0 893 aa21.74■■□□□ 1.07
SHKBP1-222ENST00000600320 CMTR2Q8IYT2 770 aaKnown RBP21.74■■□□□ 1.07
SHKBP1-222ENST00000600320 ENOX1Q8TC92 643 aaKnown RBP21.74■■□□□ 1.07
SHKBP1-222ENST00000600320 BORCS6Q96GS4 357 aa21.74■■□□□ 1.07
SHKBP1-222ENST00000600320 CEP63Q96MT8 703 aa21.74■■□□□ 1.07
SHKBP1-222ENST00000600320 PDE11AQ9HCR9 933 aa21.74■■□□□ 1.07
SHKBP1-222ENST00000600320 TBC1D13Q9NVG8 400 aa21.74■■□□□ 1.07
SHKBP1-222ENST00000600320 FRMD4BQ9Y2L6 1034 aa21.74■■□□□ 1.07
SHKBP1-222ENST00000600320 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.73■■□□□ 1.07
SHKBP1-222ENST00000600320 SMIM28A0A1B0GU29 152 aa21.73■■□□□ 1.07
SHKBP1-222ENST00000600320 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.73■■□□□ 1.07
SHKBP1-222ENST00000600320 TULP1O00294 542 aaPredicted RBP21.73■■□□□ 1.07
SHKBP1-222ENST00000600320 TLL1O43897 1013 aa21.73■■□□□ 1.07
SHKBP1-222ENST00000600320 ARHGEF15O94989 841 aa21.73■■□□□ 1.07
SHKBP1-222ENST00000600320 NFICP08651 508 aa21.73■■□□□ 1.07
SHKBP1-222ENST00000600320 KCNE1P15382 129 aa21.73■■□□□ 1.07
SHKBP1-222ENST00000600320 PSMC2P35998 433 aaKnown RBP21.73■■□□□ 1.07
SHKBP1-222ENST00000600320 PBX2P40425 430 aa21.73■■□□□ 1.07
SHKBP1-222ENST00000600320 ZNF445P59923 1031 aa21.73■■□□□ 1.07
SHKBP1-222ENST00000600320 PSMD6Q15008 389 aa21.73■■□□□ 1.07
SHKBP1-222ENST00000600320 SPATA1Q5VX52 437 aa21.73■■□□□ 1.07
SHKBP1-222ENST00000600320 JADE1Q6IE81 842 aa21.73■■□□□ 1.07
SHKBP1-222ENST00000600320 LRSAM1Q6UWE0 723 aa21.73■■□□□ 1.07
SHKBP1-222ENST00000600320 FILIP1Q7Z7B0 1213 aa21.73■■□□□ 1.07
SHKBP1-222ENST00000600320 URGCPQ8TCY9 931 aa21.73■■□□□ 1.07
SHKBP1-222ENST00000600320 SP7Q8TDD2 431 aaPredicted RBP21.73■■□□□ 1.07
SHKBP1-222ENST00000600320 PPP1R10Q96QC0 940 aaKnown RBP21.73■■□□□ 1.07
SHKBP1-222ENST00000600320 RAD9AQ99638 391 aa21.73■■□□□ 1.07
SHKBP1-222ENST00000600320 MKNK1Q9BUB5 465 aa21.73■■□□□ 1.07
SHKBP1-222ENST00000600320 YBX2Q9Y2T7 364 aaKnown RBP21.73■■□□□ 1.07
SHKBP1-222ENST00000600320 INSL6Q9Y581 213 aa21.73■■□□□ 1.07
SHKBP1-222ENST00000600320 GBF1Q92538 1859 aa21.73■■□□□ 1.07
SHKBP1-222ENST00000600320 MAPK13O15264 365 aa21.72■■□□□ 1.07
SHKBP1-222ENST00000600320 DDHD2O94830 711 aa21.72■■□□□ 1.07
SHKBP1-222ENST00000600320 BTG3Q14201 252 aaPredicted RBP21.72■■□□□ 1.07
SHKBP1-222ENST00000600320 NCAPHQ15003 741 aa21.72■■□□□ 1.07
SHKBP1-222ENST00000600320 NAB2Q15742 525 aa21.72■■□□□ 1.07
SHKBP1-222ENST00000600320 HABP4Q5JVS0 413 aaKnown RBP21.72■■□□□ 1.07
SHKBP1-222ENST00000600320 ZNF280BQ86YH2 543 aa21.72■■□□□ 1.07
SHKBP1-222ENST00000600320 IRF2BP1Q8IU81 584 aa21.72■■□□□ 1.07
SHKBP1-222ENST00000600320 CD302Q8IX05 232 aa21.72■■□□□ 1.07
SHKBP1-222ENST00000600320 CCDC127Q96BQ5 260 aa21.72■■□□□ 1.07
SHKBP1-222ENST00000600320 KIF12Q96FN5 646 aa21.72■■□□□ 1.07
SHKBP1-222ENST00000600320 ASB7Q9H672 318 aa21.72■■□□□ 1.07
SHKBP1-222ENST00000600320 CACNG4Q9UBN1 327 aa21.72■■□□□ 1.07
SHKBP1-222ENST00000600320 MRPL42Q9Y6G3 142 aaKnown RBP21.72■■□□□ 1.07
SHKBP1-222ENST00000600320 PDCD11Q14690 1871 aaKnown RBP21.72■■□□□ 1.07
SHKBP1-222ENST00000600320 PTPRJQ12913 1337 aa21.72■■□□□ 1.07
SHKBP1-222ENST00000600320 SLC16A3O15427 465 aaKnown RBP21.71■■□□□ 1.07
SHKBP1-222ENST00000600320 IL18RAPO95256 599 aa21.71■■□□□ 1.07
SHKBP1-222ENST00000600320 EPB41P11171 864 aaKnown RBP21.71■■□□□ 1.07
SHKBP1-222ENST00000600320 DLG4P78352 724 aa21.71■■□□□ 1.07
SHKBP1-222ENST00000600320 SOX4Q06945 474 aaPredicted RBP21.71■■□□□ 1.07
SHKBP1-222ENST00000600320 GRIK3Q13003 919 aa21.71■■□□□ 1.07
SHKBP1-222ENST00000600320 ZBTB6Q15916 424 aa21.71■■□□□ 1.07
SHKBP1-222ENST00000600320 C1orf220Q5T0J3 134 aa21.71■■□□□ 1.07
SHKBP1-222ENST00000600320 LMBRD2Q68DH5 695 aaPredicted RBP21.71■■□□□ 1.07
SHKBP1-222ENST00000600320 LRRC43Q8N309 656 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms