RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 GPD1LQ8N335 351 aa21.06■□□□□ 0.96
UPF1-209ENST00000600310 TMEM174Q8WUU8 243 aa21.06■□□□□ 0.96
UPF1-209ENST00000600310 SAAL1Q96ER3 474 aa21.06■□□□□ 0.96
UPF1-209ENST00000600310 FBXL18Q96ME1 805 aa21.06■□□□□ 0.96
UPF1-209ENST00000600310 FAM193BQ96PV7 902 aaPredicted RBP21.06■□□□□ 0.96
UPF1-209ENST00000600310 FAM213AQ9BRX8 229 aa21.06■□□□□ 0.96
UPF1-209ENST00000600310 PLVAPQ9BX97 442 aa21.06■□□□□ 0.96
UPF1-209ENST00000600310 SEMA6BQ9H3T3 888 aa21.06■□□□□ 0.96
UPF1-209ENST00000600310 HSPBP1Q9NZL4 362 aa21.06■□□□□ 0.96
UPF1-209ENST00000600310 SMIM28A0A1B0GU29 152 aa21.05■□□□□ 0.96
UPF1-209ENST00000600310 C5orf67F2Z3F1 127 aa21.05■□□□□ 0.96
UPF1-209ENST00000600310 THP07101 528 aa21.05■□□□□ 0.96
UPF1-209ENST00000600310 PTMSP20962 102 aa21.05■□□□□ 0.96
UPF1-209ENST00000600310 PPP1R2P41236 205 aa21.05■□□□□ 0.96
UPF1-209ENST00000600310 MYBPC2Q14324 1141 aa21.05■□□□□ 0.96
UPF1-209ENST00000600310 SLC9A9Q8IVB4 645 aa21.05■□□□□ 0.96
UPF1-209ENST00000600310 CD302Q8IX05 232 aa21.05■□□□□ 0.96
UPF1-209ENST00000600310 COLGALT2Q8IYK4 626 aa21.05■□□□□ 0.96
UPF1-209ENST00000600310 ADSSL1Q8N142 457 aa21.05■□□□□ 0.96
UPF1-209ENST00000600310 COLGALT1Q8NBJ5 622 aa21.05■□□□□ 0.96
UPF1-209ENST00000600310 ZSWIM2Q8NEG5 633 aa21.05■□□□□ 0.96
UPF1-209ENST00000600310 ARNTL2Q8WYA1 636 aa21.05■□□□□ 0.96
UPF1-209ENST00000600310 ZMAT2Q96NC0 199 aaKnown RBP21.05■□□□□ 0.96
UPF1-209ENST00000600310 PPP1R10Q96QC0 940 aaKnown RBP21.05■□□□□ 0.96
UPF1-209ENST00000600310 TMEM175Q9BSA9 504 aa21.05■□□□□ 0.96
UPF1-209ENST00000600310 CERS4Q9HA82 394 aa21.05■□□□□ 0.96
UPF1-209ENST00000600310 KIAA1586Q9HCI6 787 aa21.05■□□□□ 0.96
UPF1-209ENST00000600310 DMAC2Q9NW81 257 aa21.05■□□□□ 0.96
UPF1-209ENST00000600310 CARNS1A5YM72 827 aa21.04■□□□□ 0.96
UPF1-209ENST00000600310 GOLGA8IPA6NC78 632 aa21.04■□□□□ 0.96
UPF1-209ENST00000600310 GOLGA8JA6NMD2 632 aa21.04■□□□□ 0.96
UPF1-209ENST00000600310 LACTBL1A8MY62 500 aa21.04■□□□□ 0.96
UPF1-209ENST00000600310 CALUO43852 315 aaPredicted RBP21.04■□□□□ 0.96
UPF1-209ENST00000600310 B4GALT3O60512 393 aa21.04■□□□□ 0.96
UPF1-209ENST00000600310 GALTP07902 379 aa21.04■□□□□ 0.96
UPF1-209ENST00000600310 CTNNB1P35222 781 aa21.04■□□□□ 0.96
UPF1-209ENST00000600310 BCAR1P56945 870 aa21.04■□□□□ 0.96
UPF1-209ENST00000600310 PPP2R3AQ06190 1150 aa21.04■□□□□ 0.96
UPF1-209ENST00000600310 NFIL3Q16649 462 aa21.04■□□□□ 0.96
UPF1-209ENST00000600310 ZCWPW2Q504Y3 356 aa21.04■□□□□ 0.96
UPF1-209ENST00000600310 GLRA4Q5JXX5 417 aa21.04■□□□□ 0.96
UPF1-209ENST00000600310 KCNT2Q6UVM3 1135 aa21.04■□□□□ 0.96
UPF1-209ENST00000600310 BRSK2Q8IWQ3 736 aa21.04■□□□□ 0.96
UPF1-209ENST00000600310 XXYLT1Q8NBI6 393 aa21.04■□□□□ 0.96
UPF1-209ENST00000600310 ZNF558Q96NG5 402 aa21.04■□□□□ 0.96
UPF1-209ENST00000600310 TSPAN18Q96SJ8 248 aa21.04■□□□□ 0.96
UPF1-209ENST00000600310 DNAJB4Q9UDY4 337 aa21.04■□□□□ 0.96
UPF1-209ENST00000600310 MTUS1Q9ULD2 1270 aa21.04■□□□□ 0.96
UPF1-209ENST00000600310 PCDHB12Q9Y5F1 795 aa21.04■□□□□ 0.96
UPF1-209ENST00000600310 ZC3H11AO75152 810 aaKnown RBP eCLIP21.03■□□□□ 0.96
UPF1-209ENST00000600310 ALDH2P05091 517 aa21.03■□□□□ 0.96
UPF1-209ENST00000600310 CD44P16070 742 aaKnown RBP21.03■□□□□ 0.96
UPF1-209ENST00000600310 ALDH7A1P49419 539 aaKnown RBP21.03■□□□□ 0.96
UPF1-209ENST00000600310 CYP2J2P51589 502 aa21.03■□□□□ 0.96
UPF1-209ENST00000600310 TUSC3Q13454 348 aa21.03■□□□□ 0.96
UPF1-209ENST00000600310 STIM1Q13586 685 aa21.03■□□□□ 0.96
UPF1-209ENST00000600310 HSP90AA2PQ14568 343 aaPredicted RBP21.03■□□□□ 0.96
UPF1-209ENST00000600310 NAB2Q15742 525 aa21.03■□□□□ 0.96
UPF1-209ENST00000600310 CENPPQ6IPU0 288 aa21.03■□□□□ 0.96
UPF1-209ENST00000600310 RBM43Q6ZSC3 357 aaKnown RBP21.03■□□□□ 0.96
UPF1-209ENST00000600310 FBXO22Q8NEZ5 403 aa21.03■□□□□ 0.96
UPF1-209ENST00000600310 P2RX5Q93086 422 aa21.03■□□□□ 0.96
UPF1-209ENST00000600310 DHTKD1Q96HY7 919 aaPredicted RBP21.03■□□□□ 0.96
UPF1-209ENST00000600310 ASB7Q9H672 318 aa21.03■□□□□ 0.96
UPF1-209ENST00000600310 SLC38A7Q9NVC3 462 aa21.03■□□□□ 0.96
UPF1-209ENST00000600310 EPOPA6NHQ4 379 aa21.02■□□□□ 0.96
UPF1-209ENST00000600310 ZNF233A6NK53 670 aa21.02■□□□□ 0.96
UPF1-209ENST00000600310 PPP1R3GB7ZBB8 358 aa21.02■□□□□ 0.96
UPF1-209ENST00000600310 PSMA7O14818 248 aa21.02■□□□□ 0.96
UPF1-209ENST00000600310 NR3C1P04150 777 aa21.02■□□□□ 0.96
UPF1-209ENST00000600310 SLC11A1P49279 550 aa21.02■□□□□ 0.96
UPF1-209ENST00000600310 GRIN2CQ14957 1233 aa21.02■□□□□ 0.96
UPF1-209ENST00000600310 ZBTB6Q15916 424 aa21.02■□□□□ 0.96
UPF1-209ENST00000600310 EDRF1Q3B7T1 1238 aa21.02■□□□□ 0.96
UPF1-209ENST00000600310 CCDC183Q5T5S1 534 aa21.02■□□□□ 0.96
UPF1-209ENST00000600310 CBWD2Q8IUF1 395 aa21.02■□□□□ 0.96
UPF1-209ENST00000600310 SLC39A11Q8N1S5 342 aa21.02■□□□□ 0.96
UPF1-209ENST00000600310 FAM212AQ96EL1 285 aa21.02■□□□□ 0.96
UPF1-209ENST00000600310 RBAKQ9NYW8 714 aaPredicted RBP21.02■□□□□ 0.96
UPF1-209ENST00000600310 H3BNC9 293 aa21.01■□□□□ 0.95
UPF1-209ENST00000600310 EXOC3O60645 756 aa21.01■□□□□ 0.95
UPF1-209ENST00000600310 IL18RAPO95256 599 aa21.01■□□□□ 0.95
UPF1-209ENST00000600310 PPM1AP35813 382 aa21.01■□□□□ 0.95
UPF1-209ENST00000600310 PBX3P40426 434 aa21.01■□□□□ 0.95
UPF1-209ENST00000600310 KLHL23Q8NBE8 558 aa21.01■□□□□ 0.95
UPF1-209ENST00000600310 NOC3LQ8WTT2 800 aaKnown RBP21.01■□□□□ 0.95
UPF1-209ENST00000600310 C11orf84Q9BUA3 381 aaPredicted RBP21.01■□□□□ 0.95
UPF1-209ENST00000600310 SPG21Q9NZD8 308 aa21.01■□□□□ 0.95
UPF1-209ENST00000600310 FAN1Q9Y2M0 1017 aa21.01■□□□□ 0.95
UPF1-209ENST00000600310 DERAQ9Y315 318 aa21.01■□□□□ 0.95
UPF1-209ENST00000600310 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.01■□□□□ 0.95
UPF1-209ENST00000600310 NRP1O14786 923 aa21■□□□□ 0.95
UPF1-209ENST00000600310 CCNE1P24864 410 aa21■□□□□ 0.95
UPF1-209ENST00000600310 RPL13P26373 211 aaKnown RBP21■□□□□ 0.95
UPF1-209ENST00000600310 PLCB3Q01970 1234 aa21■□□□□ 0.95
UPF1-209ENST00000600310 SPAG1Q07617 926 aa21■□□□□ 0.95
UPF1-209ENST00000600310 GPM6BQ13491 265 aa21■□□□□ 0.95
UPF1-209ENST00000600310 SNRNP35Q16560 246 aaKnown RBP21■□□□□ 0.95
UPF1-209ENST00000600310 Q7L0L9 218 aa21■□□□□ 0.95
UPF1-209ENST00000600310 DEFB123Q8N688 67 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms