RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 NAT10Q9H0A0 1025 aaKnown RBP18.16■□□□□ 0.5
USHBP1-210ENST00000600286 IKZF4Q9H2S9 585 aa18.16■□□□□ 0.5
USHBP1-210ENST00000600286 SEMA6BQ9H3T3 888 aa18.16■□□□□ 0.5
USHBP1-210ENST00000600286 SLC38A7Q9NVC3 462 aa18.16■□□□□ 0.5
USHBP1-210ENST00000600286 CPSF3Q9UKF6 684 aaKnown RBP18.16■□□□□ 0.5
USHBP1-210ENST00000600286 RWDD3Q9Y3V2 267 aa18.16■□□□□ 0.5
USHBP1-210ENST00000600286 GOLGA8IPA6NC78 632 aa18.15■□□□□ 0.5
USHBP1-210ENST00000600286 GOLGA8JA6NMD2 632 aa18.15■□□□□ 0.5
USHBP1-210ENST00000600286 GRXCR1A8MXD5 290 aa18.15■□□□□ 0.5
USHBP1-210ENST00000600286 BMP6P22004 513 aa18.15■□□□□ 0.5
USHBP1-210ENST00000600286 RABGGTBP53611 331 aa18.15■□□□□ 0.5
USHBP1-210ENST00000600286 SEZ6Q53EL9 994 aa18.15■□□□□ 0.5
USHBP1-210ENST00000600286 CLLU1OSQ5K130 101 aa18.15■□□□□ 0.5
USHBP1-210ENST00000600286 CEP135Q66GS9 1140 aa18.15■□□□□ 0.5
USHBP1-210ENST00000600286 CEP120Q8N960 986 aa18.15■□□□□ 0.5
USHBP1-210ENST00000600286 RDH13Q8NBN7 331 aa18.15■□□□□ 0.5
USHBP1-210ENST00000600286 CASD1Q96PB1 797 aa18.15■□□□□ 0.5
USHBP1-210ENST00000600286 HAPLN2Q9GZV7 340 aa18.15■□□□□ 0.5
USHBP1-210ENST00000600286 ASB7Q9H672 318 aa18.15■□□□□ 0.5
USHBP1-210ENST00000600286 SLC28A3Q9HAS3 691 aa18.15■□□□□ 0.5
USHBP1-210ENST00000600286 RBAKQ9NYW8 714 aaPredicted RBP18.15■□□□□ 0.5
USHBP1-210ENST00000600286 RWDD2AQ9UIY3 292 aa18.15■□□□□ 0.5
USHBP1-210ENST00000600286 CTNND2Q9UQB3 1225 aa18.15■□□□□ 0.5
USHBP1-210ENST00000600286 SPTBN5Q9NRC6 3674 aaKnown RBP18.15■□□□□ 0.5
USHBP1-210ENST00000600286 REV3LO60673 3130 aa18.15■□□□□ 0.5
USHBP1-210ENST00000600286 KRT13P13646 458 aa18.14■□□□□ 0.49
USHBP1-210ENST00000600286 ERCC5P28715 1186 aaPredicted RBP18.14■□□□□ 0.49
USHBP1-210ENST00000600286 PSMC2P35998 433 aaKnown RBP18.14■□□□□ 0.49
USHBP1-210ENST00000600286 GRIK3Q13003 919 aa18.14■□□□□ 0.49
USHBP1-210ENST00000600286 SNRNP35Q16560 246 aaKnown RBP18.14■□□□□ 0.49
USHBP1-210ENST00000600286 ANKRD40Q6AI12 368 aa18.14■□□□□ 0.49
USHBP1-210ENST00000600286 FOXR2Q6PJQ5 311 aa18.14■□□□□ 0.49
USHBP1-210ENST00000600286 CACTINQ8WUQ7 758 aaKnown RBP18.14■□□□□ 0.49
USHBP1-210ENST00000600286 SNX27Q96L92 541 aa18.14■□□□□ 0.49
USHBP1-210ENST00000600286 FNBP1Q96RU3 617 aa18.14■□□□□ 0.49
USHBP1-210ENST00000600286 DMAC2Q9NW81 257 aa18.14■□□□□ 0.49
USHBP1-210ENST00000600286 R3HCC1Q9Y3T6 440 aaKnown RBP18.14■□□□□ 0.49
USHBP1-210ENST00000600286 TTC3P53804 2025 aa18.14■□□□□ 0.49
USHBP1-210ENST00000600286 MICAL3Q7RTP6 2002 aa18.14■□□□□ 0.49
USHBP1-210ENST00000600286 MEIS3P2A8K0S8 358 aa18.13■□□□□ 0.49
USHBP1-210ENST00000600286 LACTBL1A8MY62 500 aa18.13■□□□□ 0.49
USHBP1-210ENST00000600286 RBAK-RBAKDNI3L0D1 243 aa18.13■□□□□ 0.49
USHBP1-210ENST00000600286 INPPL1O15357 1258 aa18.13■□□□□ 0.49
USHBP1-210ENST00000600286 POMCP01189 267 aa18.13■□□□□ 0.49
USHBP1-210ENST00000600286 ALDH2P05091 517 aa18.13■□□□□ 0.49
USHBP1-210ENST00000600286 CXCL8P10145 99 aa18.13■□□□□ 0.49
USHBP1-210ENST00000600286 EPB41P11171 864 aaKnown RBP18.13■□□□□ 0.49
USHBP1-210ENST00000600286 CD44P16070 742 aaKnown RBP18.13■□□□□ 0.49
USHBP1-210ENST00000600286 TNFSF9P41273 254 aa18.13■□□□□ 0.49
USHBP1-210ENST00000600286 ALDH7A1P49419 539 aaKnown RBP18.13■□□□□ 0.49
USHBP1-210ENST00000600286 SCNN1GP51170 649 aa18.13■□□□□ 0.49
USHBP1-210ENST00000600286 ENOX2Q16206 610 aaKnown RBP18.13■□□□□ 0.49
USHBP1-210ENST00000600286 SLC10A6Q3KNW5 377 aa18.13■□□□□ 0.49
USHBP1-210ENST00000600286 ZNF697Q5TEC3 545 aa18.13■□□□□ 0.49
USHBP1-210ENST00000600286 NT5DC4Q86YG4 428 aa18.13■□□□□ 0.49
USHBP1-210ENST00000600286 BRSK2Q8IWQ3 736 aa18.13■□□□□ 0.49
USHBP1-210ENST00000600286 TMEM192Q8IY95 271 aa18.13■□□□□ 0.49
USHBP1-210ENST00000600286 KIF12Q96FN5 646 aa18.13■□□□□ 0.49
USHBP1-210ENST00000600286 ZFP42Q96MM3 310 aa18.13■□□□□ 0.49
USHBP1-210ENST00000600286 FAM161BQ96MY7 647 aa18.13■□□□□ 0.49
USHBP1-210ENST00000600286 SAMD11Q96NU1 681 aa18.13■□□□□ 0.49
USHBP1-210ENST00000600286 PBX4Q9BYU1 374 aa18.13■□□□□ 0.49
USHBP1-210ENST00000600286 RNF19AQ9NV58 838 aa18.13■□□□□ 0.49
USHBP1-210ENST00000600286 CNTN3Q9P232 1028 aa18.13■□□□□ 0.49
USHBP1-210ENST00000600286 DERAQ9Y315 318 aa18.13■□□□□ 0.49
USHBP1-210ENST00000600286 PCDHB12Q9Y5F1 795 aa18.13■□□□□ 0.49
USHBP1-210ENST00000600286 TMEM265A0A087WTH1 108 aa18.12■□□□□ 0.49
USHBP1-210ENST00000600286 SMIM28A0A1B0GU29 152 aa18.12■□□□□ 0.49
USHBP1-210ENST00000600286 TTC26A0AVF1 554 aa18.12■□□□□ 0.49
USHBP1-210ENST00000600286 MAPK13O15264 365 aa18.12■□□□□ 0.49
USHBP1-210ENST00000600286 FAM189A1O60320 539 aa18.12■□□□□ 0.49
USHBP1-210ENST00000600286 GNA14O95837 355 aa18.12■□□□□ 0.49
USHBP1-210ENST00000600286 KCNE1P15382 129 aa18.12■□□□□ 0.49
USHBP1-210ENST00000600286 LAG3P18627 525 aa18.12■□□□□ 0.49
USHBP1-210ENST00000600286 GATMP50440 423 aa18.12■□□□□ 0.49
USHBP1-210ENST00000600286 STX17P56962 302 aa18.12■□□□□ 0.49
USHBP1-210ENST00000600286 TYRO3Q06418 890 aa18.12■□□□□ 0.49
USHBP1-210ENST00000600286 ZCWPW2Q504Y3 356 aa18.12■□□□□ 0.49
USHBP1-210ENST00000600286 ZBTB41Q5SVQ8 909 aa18.12■□□□□ 0.49
USHBP1-210ENST00000600286 ALKAL1Q6UXT8 129 aa18.12■□□□□ 0.49
USHBP1-210ENST00000600286 FAM186BQ8IYM0 893 aa18.12■□□□□ 0.49
USHBP1-210ENST00000600286 CSGALNACT2Q8N6G5 542 aa18.12■□□□□ 0.49
USHBP1-210ENST00000600286 BEST2Q8NFU1 509 aa18.12■□□□□ 0.49
USHBP1-210ENST00000600286 SP7Q8TDD2 431 aaPredicted RBP18.12■□□□□ 0.49
USHBP1-210ENST00000600286 TIFAQ96CG3 184 aa18.12■□□□□ 0.49
USHBP1-210ENST00000600286 FBXL18Q96ME1 805 aa18.12■□□□□ 0.49
USHBP1-210ENST00000600286 CEP63Q96MT8 703 aa18.12■□□□□ 0.49
USHBP1-210ENST00000600286 CDX2Q99626 313 aaPredicted RBP18.12■□□□□ 0.49
USHBP1-210ENST00000600286 TBC1D13Q9NVG8 400 aa18.12■□□□□ 0.49
USHBP1-210ENST00000600286 SYCE3A1L190 88 aa18.11■□□□□ 0.49
USHBP1-210ENST00000600286 CA3P07451 260 aa18.11■□□□□ 0.49
USHBP1-210ENST00000600286 DNAJB2P25686 324 aa18.11■□□□□ 0.49
USHBP1-210ENST00000600286 TMEM132DQ14C87 1099 aa18.11■□□□□ 0.49
USHBP1-210ENST00000600286 DPCR1Q3MIW9 517 aa18.11■□□□□ 0.49
USHBP1-210ENST00000600286 XKR4Q5GH76 650 aa18.11■□□□□ 0.49
USHBP1-210ENST00000600286 PPP2R2DQ66LE6 453 aa18.11■□□□□ 0.49
USHBP1-210ENST00000600286 CRELD2Q6UXH1 353 aaPredicted RBP18.11■□□□□ 0.49
USHBP1-210ENST00000600286 INTS8Q75QN2 995 aaKnown RBP18.11■□□□□ 0.49
USHBP1-210ENST00000600286 CBWD2Q8IUF1 395 aa18.11■□□□□ 0.49
USHBP1-210ENST00000600286 UROC1Q96N76 676 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms