RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 WDR49Q8IV35 697 aa13.34□□□□□ -0.27
TGFB1-204ENST00000600196 FAM186BQ8IYM0 893 aa13.34□□□□□ -0.27
TGFB1-204ENST00000600196 PARD3BQ8TEW8 1205 aa13.34□□□□□ -0.27
TGFB1-204ENST00000600196 DDX27Q96GQ7 796 aaKnown RBP13.34□□□□□ -0.27
TGFB1-204ENST00000600196 SNX27Q96L92 541 aa13.34□□□□□ -0.27
TGFB1-204ENST00000600196 UROC1Q96N76 676 aa13.34□□□□□ -0.27
TGFB1-204ENST00000600196 MED15Q96RN5 788 aa13.34□□□□□ -0.27
TGFB1-204ENST00000600196 FNBP1Q96RU3 617 aa13.34□□□□□ -0.27
TGFB1-204ENST00000600196 RAD9AQ99638 391 aa13.34□□□□□ -0.27
TGFB1-204ENST00000600196 UBE2OQ9C0C9 1292 aaKnown RBP13.34□□□□□ -0.27
TGFB1-204ENST00000600196 NXF3Q9H4D5 531 aaKnown RBP13.34□□□□□ -0.27
TGFB1-204ENST00000600196 PCIF1Q9H4Z3 704 aa13.34□□□□□ -0.27
TGFB1-204ENST00000600196 SNTG2Q9NY99 539 aa13.34□□□□□ -0.27
TGFB1-204ENST00000600196 RBAKQ9NYW8 714 aaPredicted RBP13.34□□□□□ -0.27
TGFB1-204ENST00000600196 MAGEC2Q9UBF1 373 aaPredicted RBP13.34□□□□□ -0.27
TGFB1-204ENST00000600196 UBQLN1Q9UMX0 589 aaKnown RBP13.34□□□□□ -0.27
TGFB1-204ENST00000600196 NFE2L3Q9Y4A8 694 aa13.34□□□□□ -0.27
TGFB1-204ENST00000600196 MKI67P46013 3256 aaKnown RBP13.33□□□□□ -0.27
TGFB1-204ENST00000600196 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.33□□□□□ -0.28
TGFB1-204ENST00000600196 SMIM28A0A1B0GU29 152 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.33□□□□□ -0.28
TGFB1-204ENST00000600196 TRIM49BA6NDI0 452 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 ARL5CA6NH57 179 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 TISP43B9A030 160 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 N4BP1O75113 896 aaKnown RBP13.33□□□□□ -0.28
TGFB1-204ENST00000600196 RECQL4O94761 1208 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 THP07101 528 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 TPM2P07951 284 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 ACOT2P49753 483 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 CYP2J2P51589 502 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 BFSP1Q12934 665 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 NCAPHQ15003 741 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 DUOXA2Q1HG44 320 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 TCTN1Q2MV58 587 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 NOMO2Q5JPE7 1267 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 CDKAL1Q5VV42 579 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 CEP135Q66GS9 1140 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.33□□□□□ -0.281e-6■■□□□ 12.2
TGFB1-204ENST00000600196 C11orf57Q6ZUT1 292 aaPredicted RBP13.33□□□□□ -0.28
TGFB1-204ENST00000600196 OTOP2Q7RTS6 562 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 RPS6KC1Q96S38 1066 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 TMEM175Q9BSA9 504 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 PRO3102Q9H379 93 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 RC3H2Q9HBD1 1191 aaKnown RBP13.33□□□□□ -0.28
TGFB1-204ENST00000600196 PARP2Q9UGN5 583 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 USP20Q9Y2K6 914 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 RWDD3Q9Y3V2 267 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 SCN5AQ14524 2016 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 MICAL3Q7RTP6 2002 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 COL4A6Q14031 1691 aa13.33□□□□□ -0.28
TGFB1-204ENST00000600196 FAM163BP0C2L3 166 aa13.32□□□□□ -0.28
TGFB1-204ENST00000600196 ATP2A2P16615 1042 aaKnown RBP13.32□□□□□ -0.28
TGFB1-204ENST00000600196 ZNF18P17022 549 aa13.32□□□□□ -0.28
TGFB1-204ENST00000600196 VAMP7P51809 220 aa13.32□□□□□ -0.28
TGFB1-204ENST00000600196 STX17P56962 302 aa13.32□□□□□ -0.28
TGFB1-204ENST00000600196 CETN1Q12798 172 aa13.32□□□□□ -0.28
TGFB1-204ENST00000600196 CDR2LQ86X02 465 aaPredicted RBP13.32□□□□□ -0.28
TGFB1-204ENST00000600196 CBWD2Q8IUF1 395 aa13.32□□□□□ -0.28
TGFB1-204ENST00000600196 HERC6Q8IVU3 1022 aa13.32□□□□□ -0.28
TGFB1-204ENST00000600196 TRIM59Q8IWR1 403 aa13.32□□□□□ -0.28
TGFB1-204ENST00000600196 LRRC43Q8N309 656 aa13.32□□□□□ -0.28
TGFB1-204ENST00000600196 GSTCDQ8NEC7 633 aa13.32□□□□□ -0.28
TGFB1-204ENST00000600196 SP7Q8TDD2 431 aaPredicted RBP13.32□□□□□ -0.28
TGFB1-204ENST00000600196 SAAL1Q96ER3 474 aa13.32□□□□□ -0.28
TGFB1-204ENST00000600196 CASD1Q96PB1 797 aa13.32□□□□□ -0.28
TGFB1-204ENST00000600196 CGRRF1Q99675 332 aa13.32□□□□□ -0.28
TGFB1-204ENST00000600196 RNF39Q9H2S5 420 aa13.32□□□□□ -0.28
TGFB1-204ENST00000600196 FAM124BQ9H5Z6 455 aaPredicted RBP13.32□□□□□ -0.28
TGFB1-204ENST00000600196 PCDHA11Q9Y5I1 949 aa13.32□□□□□ -0.28
TGFB1-204ENST00000600196 GTPBP10A4D1E9 387 aaKnown RBP13.31□□□□□ -0.28
TGFB1-204ENST00000600196 ZBBXA8MT70 800 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 LACTBL1A8MY62 500 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 GOLGA6L19H0YKK7 550 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 CXCL8P10145 99 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 LRPAP1P30533 357 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 TNFSF9P41273 254 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 CASP4P49662 377 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 DSC1Q08554 894 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 TUSC3Q13454 348 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 TMEM132DQ14C87 1099 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 SHHQ15465 462 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 UVSSAQ2YD98 709 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 CCDC40Q4G0X9 1142 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 TCP11X2Q5H9J9 407 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 IRF2BP1Q8IU81 584 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 DHX40Q8IX18 779 aaKnown RBP13.31□□□□□ -0.28
TGFB1-204ENST00000600196 TDHQ8IZJ6 230 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 CEP120Q8N960 986 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 BEST2Q8NFU1 509 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 TAF4BQ92750 862 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 RNPC3Q96LT9 517 aaKnown RBP13.31□□□□□ -0.28
TGFB1-204ENST00000600196 SAMD11Q96NU1 681 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 PPP1R10Q96QC0 940 aaKnown RBP13.31□□□□□ -0.28
TGFB1-204ENST00000600196 GAD1Q99259 594 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 GZF1Q9H116 711 aaPredicted RBP13.31□□□□□ -0.28
TGFB1-204ENST00000600196 IKZF4Q9H2S9 585 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 CBX8Q9HC52 389 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 AAASQ9NRG9 546 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 RNF19AQ9NV58 838 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 INTS13Q9NVM9 706 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms