RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 CACNG4Q9UBN1 327 aa23.36■■□□□ 1.33
PNKP-212ENST00000599454 CDH7Q9ULB5 785 aa23.36■■□□□ 1.33
PNKP-212ENST00000599454 SIT1Q9Y3P8 196 aa23.36■■□□□ 1.33
PNKP-212ENST00000599454 XYLBO75191 536 aa23.35■■□□□ 1.33
PNKP-212ENST00000599454 MED24O75448 989 aa23.35■■□□□ 1.33
PNKP-212ENST00000599454 PRKCBP05771 671 aa23.35■■□□□ 1.33
PNKP-212ENST00000599454 C8AP07357 584 aa23.35■■□□□ 1.33
PNKP-212ENST00000599454 CYP11B2P19099 503 aa23.35■■□□□ 1.33
PNKP-212ENST00000599454 MUTP22033 750 aa23.35■■□□□ 1.33
PNKP-212ENST00000599454 RPA1P27694 616 aa23.35■■□□□ 1.33
PNKP-212ENST00000599454 MCM7P33993 719 aa23.35■■□□□ 1.33
PNKP-212ENST00000599454 DCAF4L1Q3SXM0 396 aa23.35■■□□□ 1.33
PNKP-212ENST00000599454 PADI6Q6TGC4 694 aa23.35■■□□□ 1.33
PNKP-212ENST00000599454 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.35■■□□□ 1.33
PNKP-212ENST00000599454 MTSS1LQ765P7 747 aa23.35■■□□□ 1.33
PNKP-212ENST00000599454 RTL10Q7L3V2 364 aa23.35■■□□□ 1.33
PNKP-212ENST00000599454 GRASPQ7Z6J2 395 aaPredicted RBP23.35■■□□□ 1.33
PNKP-212ENST00000599454 DEPTORQ8TB45 409 aa23.35■■□□□ 1.33
PNKP-212ENST00000599454 SHDQ96IW2 340 aa23.35■■□□□ 1.33
PNKP-212ENST00000599454 CCDC113Q9H0I3 377 aa23.35■■□□□ 1.33
PNKP-212ENST00000599454 ARHGEF35A5YM69 484 aa23.34■■□□□ 1.33
PNKP-212ENST00000599454 TMEM189-UBE2V1I3L0A0 370 aa23.34■■□□□ 1.33
PNKP-212ENST00000599454 JAK2O60674 1132 aa23.34■■□□□ 1.33
PNKP-212ENST00000599454 RBM25P49756 843 aaKnown RBP23.34■■□□□ 1.33
PNKP-212ENST00000599454 NAB2Q15742 525 aa23.34■■□□□ 1.33
PNKP-212ENST00000599454 UVSSAQ2YD98 709 aa23.34■■□□□ 1.33
PNKP-212ENST00000599454 ZC3H14Q6PJT7 736 aaKnown RBP23.34■■□□□ 1.33
PNKP-212ENST00000599454 ERMP1Q7Z2K6 904 aa23.34■■□□□ 1.33
PNKP-212ENST00000599454 OTOGLQ3ZCN5 2332 aa23.34■■□□□ 1.33
PNKP-212ENST00000599454 TTLL13PA6NNM8 815 aa23.33■■□□□ 1.33
PNKP-212ENST00000599454 LMNAP02545 664 aaKnown RBP23.33■■□□□ 1.33
PNKP-212ENST00000599454 EFNA5P52803 228 aa23.33■■□□□ 1.33
PNKP-212ENST00000599454 FOSBP53539 338 aa23.33■■□□□ 1.33
PNKP-212ENST00000599454 STARD6P59095 220 aa23.33■■□□□ 1.33
PNKP-212ENST00000599454 RAB33AQ14088 237 aa23.33■■□□□ 1.33
PNKP-212ENST00000599454 APBB1IPQ7Z5R6 666 aaPredicted RBP23.33■■□□□ 1.33
PNKP-212ENST00000599454 NOSTRINQ8IVI9 506 aa23.33■■□□□ 1.33
PNKP-212ENST00000599454 BSNDQ8WZ55 320 aa23.33■■□□□ 1.33
PNKP-212ENST00000599454 DLGAP2Q9P1A6 1054 aa23.33■■□□□ 1.33
PNKP-212ENST00000599454 PATJQ8NI35 1801 aa23.33■■□□□ 1.32
PNKP-212ENST00000599454 DMDP11532 3685 aa23.32■■□□□ 1.32
PNKP-212ENST00000599454 EIF5BO60841 1220 aaKnown RBP23.32■■□□□ 1.32
PNKP-212ENST00000599454 OR52Z1P0C646 297 aa23.32■■□□□ 1.32
PNKP-212ENST00000599454 ID4P47928 161 aa23.32■■□□□ 1.32
PNKP-212ENST00000599454 HAUS3Q68CZ6 603 aa23.32■■□□□ 1.32
PNKP-212ENST00000599454 PJA1Q8NG27 643 aa23.32■■□□□ 1.32
PNKP-212ENST00000599454 KCNG4Q8TDN1 519 aa23.32■■□□□ 1.32
PNKP-212ENST00000599454 FGF14Q92915 247 aa23.32■■□□□ 1.32
PNKP-212ENST00000599454 IFT74Q96LB3 600 aa23.32■■□□□ 1.32
PNKP-212ENST00000599454 CACNA1AO00555 2505 aa23.31■■□□□ 1.32
PNKP-212ENST00000599454 DCNP07585 359 aaKnown RBP23.31■■□□□ 1.32
PNKP-212ENST00000599454 FGFR3P22607 806 aa23.31■■□□□ 1.32
PNKP-212ENST00000599454 SPECC1Q5M775 1068 aa23.31■■□□□ 1.32
PNKP-212ENST00000599454 AXDND1Q5T1B0 1012 aaPredicted RBP23.31■■□□□ 1.32
PNKP-212ENST00000599454 PARM1Q6UWI2 310 aa23.31■■□□□ 1.32
PNKP-212ENST00000599454 C1orf210Q8IVY1 113 aa23.31■■□□□ 1.32
PNKP-212ENST00000599454 SLC7A14Q8TBB6 771 aa23.31■■□□□ 1.32
PNKP-212ENST00000599454 FGF13Q92913 245 aa23.31■■□□□ 1.32
PNKP-212ENST00000599454 UROC1Q96N76 676 aa23.31■■□□□ 1.32
PNKP-212ENST00000599454 MTRRQ9UBK8 725 aa23.31■■□□□ 1.32
PNKP-212ENST00000599454 KCNH3Q9ULD8 1083 aa23.31■■□□□ 1.32
PNKP-212ENST00000599454 MYH11P35749 1972 aa23.31■■□□□ 1.32
PNKP-212ENST00000599454 CCL16O15467 120 aa23.3■■□□□ 1.32
PNKP-212ENST00000599454 TRAPPC3O43617 180 aa23.3■■□□□ 1.32
PNKP-212ENST00000599454 NEK4P51957 841 aa23.3■■□□□ 1.32
PNKP-212ENST00000599454 GPC5P78333 572 aa23.3■■□□□ 1.32
PNKP-212ENST00000599454 NTHL1P78549 312 aa23.3■■□□□ 1.32
PNKP-212ENST00000599454 PRKCQQ04759 706 aa23.3■■□□□ 1.32
PNKP-212ENST00000599454 EEF1DP3Q658K8 133 aa23.3■■□□□ 1.32
PNKP-212ENST00000599454 KIFAP3Q92845 792 aa23.3■■□□□ 1.32
PNKP-212ENST00000599454 PPP1R10Q96QC0 940 aaKnown RBP23.3■■□□□ 1.32
PNKP-212ENST00000599454 RPP25Q9BUL9 199 aaKnown RBP23.3■■□□□ 1.32
PNKP-212ENST00000599454 CXCL16Q9H2A7 254 aa23.3■■□□□ 1.32
PNKP-212ENST00000599454 POLIQ9UNA4 740 aa23.3■■□□□ 1.32
PNKP-212ENST00000599454 GDAQ9Y2T3 454 aa23.3■■□□□ 1.32
PNKP-212ENST00000599454 BACE2Q9Y5Z0 518 aa23.3■■□□□ 1.32
PNKP-212ENST00000599454 ADAM12O43184 909 aa23.29■■□□□ 1.32
PNKP-212ENST00000599454 B3GAT3O94766 335 aa23.29■■□□□ 1.32
PNKP-212ENST00000599454 LIG1P18858 919 aa23.29■■□□□ 1.32
PNKP-212ENST00000599454 OR1D2P34982 312 aa23.29■■□□□ 1.32
PNKP-212ENST00000599454 PFKPQ01813 784 aa23.29■■□□□ 1.32
PNKP-212ENST00000599454 PDCD11Q14690 1871 aaKnown RBP23.29■■□□□ 1.32
PNKP-212ENST00000599454 FOXP1Q9H334 677 aaPredicted RBP23.29■■□□□ 1.32
PNKP-212ENST00000599454 R4GN57 208 aa23.29■■□□□ 1.32
PNKP-212ENST00000599454 KANSL1LA0AUZ9 987 aa23.28■■□□□ 1.32
PNKP-212ENST00000599454 EDN1P05305 212 aa23.28■■□□□ 1.32
PNKP-212ENST00000599454 SP9P0CG40 484 aa23.28■■□□□ 1.32
PNKP-212ENST00000599454 ZNF174Q15697 407 aa23.28■■□□□ 1.32
PNKP-212ENST00000599454 ATF7IP2Q5U623 682 aa23.28■■□□□ 1.32
PNKP-212ENST00000599454 RSPO2Q6UXX9 243 aaPredicted RBP23.28■■□□□ 1.32
PNKP-212ENST00000599454 ANKS3Q6ZW76 656 aa23.28■■□□□ 1.32
PNKP-212ENST00000599454 BORCS6Q96GS4 357 aa23.28■■□□□ 1.32
PNKP-212ENST00000599454 C8orf76Q96K31 380 aa23.28■■□□□ 1.32
PNKP-212ENST00000599454 DDX23Q9BUQ8 820 aaKnown RBP23.28■■□□□ 1.32
PNKP-212ENST00000599454 OSBPL6Q9BZF3 934 aa23.28■■□□□ 1.32
PNKP-212ENST00000599454 FOXQ1Q9C009 403 aa23.28■■□□□ 1.32
PNKP-212ENST00000599454 USP20Q9Y2K6 914 aa23.28■■□□□ 1.32
PNKP-212ENST00000599454 STK24Q9Y6E0 443 aa23.28■■□□□ 1.32
PNKP-212ENST00000599454 MLF2Q15773 248 aaPredicted RBP23.27■■□□□ 1.32
PNKP-212ENST00000599454 UPP1Q16831 310 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms