RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.09■□□□□ 0.17
EBI3-202ENST00000599339 CCDC105Q8IYK2 499 aa16.09■□□□□ 0.17
EBI3-202ENST00000599339 RSAD2Q8WXG1 361 aa16.09■□□□□ 0.17
EBI3-202ENST00000599339 BHMT2Q9H2M3 363 aa16.09■□□□□ 0.17
EBI3-202ENST00000599339 SH2B1Q9NRF2 756 aaPredicted RBP16.09■□□□□ 0.17
EBI3-202ENST00000599339 CACNG4Q9UBN1 327 aa16.09■□□□□ 0.17
EBI3-202ENST00000599339 GDAQ9Y2T3 454 aa16.09■□□□□ 0.17
EBI3-202ENST00000599339 DOCK8Q8NF50 2099 aa16.08■□□□□ 0.16
EBI3-202ENST00000599339 K7ERI5 159 aa16.08■□□□□ 0.16
EBI3-202ENST00000599339 NARSO43776 548 aaKnown RBP16.08■□□□□ 0.16
EBI3-202ENST00000599339 XYLBO75191 536 aa16.08■□□□□ 0.16
EBI3-202ENST00000599339 HOXA9P31269 272 aa16.08■□□□□ 0.16
EBI3-202ENST00000599339 PDIA5Q14554 519 aa16.08■□□□□ 0.16
EBI3-202ENST00000599339 PPM1LQ5SGD2 360 aa16.08■□□□□ 0.16
EBI3-202ENST00000599339 EEF1DP3Q658K8 133 aa16.08■□□□□ 0.16
EBI3-202ENST00000599339 LNX1Q8TBB1 728 aaPredicted RBP16.08■□□□□ 0.16
EBI3-202ENST00000599339 SNX29Q8TEQ0 813 aa16.08■□□□□ 0.16
EBI3-202ENST00000599339 UROC1Q96N76 676 aa16.08■□□□□ 0.16
EBI3-202ENST00000599339 KIAA1024Q9UPX6 916 aa16.08■□□□□ 0.16
EBI3-202ENST00000599339 PHLPP2Q6ZVD8 1323 aa16.08■□□□□ 0.16
EBI3-202ENST00000599339 PTPRZ1P23471 2315 aaPredicted RBP16.07■□□□□ 0.16
EBI3-202ENST00000599339 TMEM189-UBE2V1I3L0A0 370 aa16.07■□□□□ 0.16
EBI3-202ENST00000599339 TRAPPC3O43617 180 aa16.07■□□□□ 0.16
EBI3-202ENST00000599339 PI15O43692 258 aa16.07■□□□□ 0.16
EBI3-202ENST00000599339 B3GAT3O94766 335 aa16.07■□□□□ 0.16
EBI3-202ENST00000599339 C8AP07357 584 aa16.07■□□□□ 0.16
EBI3-202ENST00000599339 YARSP54577 528 aaKnown RBP16.07■□□□□ 0.16
EBI3-202ENST00000599339 NAB2Q15742 525 aa16.07■□□□□ 0.16
EBI3-202ENST00000599339 DTWD2Q8NBA8 298 aa16.07■□□□□ 0.16
EBI3-202ENST00000599339 NKD2Q969F2 451 aaPredicted RBP16.07■□□□□ 0.16
EBI3-202ENST00000599339 CLSTN3Q9BQT9 956 aa16.07■□□□□ 0.16
EBI3-202ENST00000599339 KIFC3Q9BVG8 833 aa16.07■□□□□ 0.16
EBI3-202ENST00000599339 TOPORSQ9NS56 1045 aaPredicted RBP16.07■□□□□ 0.16
EBI3-202ENST00000599339 DDX19AQ9NUU7 478 aaKnown RBP16.07■□□□□ 0.16
EBI3-202ENST00000599339 USP20Q9Y2K6 914 aa16.07■□□□□ 0.16
EBI3-202ENST00000599339 RIF1Q5UIP0 2472 aaKnown RBP16.06■□□□□ 0.16
EBI3-202ENST00000599339 PRR23AA6NEV1 266 aa16.06■□□□□ 0.16
EBI3-202ENST00000599339 CCDC169A6NNP5 214 aa16.06■□□□□ 0.16
EBI3-202ENST00000599339 ANHXE9PGG2 379 aa16.06■□□□□ 0.16
EBI3-202ENST00000599339 LAD1O00515 517 aa16.06■□□□□ 0.16
EBI3-202ENST00000599339 SEC24BO95487 1268 aa16.06■□□□□ 0.16
EBI3-202ENST00000599339 DMP1Q13316 513 aaPredicted RBP16.06■□□□□ 0.16
EBI3-202ENST00000599339 RAB33AQ14088 237 aa16.06■□□□□ 0.16
EBI3-202ENST00000599339 ANGPT1Q15389 498 aa16.06■□□□□ 0.16
EBI3-202ENST00000599339 UVSSAQ2YD98 709 aa16.06■□□□□ 0.16
EBI3-202ENST00000599339 NT5DC1Q5TFE4 455 aa16.06■□□□□ 0.16
EBI3-202ENST00000599339 KRT79Q5XKE5 535 aa16.06■□□□□ 0.16
EBI3-202ENST00000599339 DCLRE1AQ6PJP8 1040 aa16.06■□□□□ 0.16
EBI3-202ENST00000599339 GRASPQ7Z6J2 395 aaPredicted RBP16.06■□□□□ 0.16
EBI3-202ENST00000599339 FRMD5Q7Z6J6 570 aa16.06■□□□□ 0.16
EBI3-202ENST00000599339 GPR152Q8TDT2 470 aa16.06■□□□□ 0.16
EBI3-202ENST00000599339 CCDC94Q9BW85 323 aaPredicted RBP16.06■□□□□ 0.16
EBI3-202ENST00000599339 CA14Q9ULX7 337 aa16.06■□□□□ 0.16
EBI3-202ENST00000599339 POLIQ9UNA4 740 aa16.06■□□□□ 0.16
EBI3-202ENST00000599339 DNM3Q9UQ16 869 aa16.06■□□□□ 0.16
EBI3-202ENST00000599339 TNFSF13BQ9Y275 285 aa16.06■□□□□ 0.16
EBI3-202ENST00000599339 USP34Q70CQ2 3546 aa16.06■□□□□ 0.16
EBI3-202ENST00000599339 KRBA1A5PL33 1030 aa16.05■□□□□ 0.16
EBI3-202ENST00000599339 CCL16O15467 120 aa16.05■□□□□ 0.16
EBI3-202ENST00000599339 EDN1P05305 212 aa16.05■□□□□ 0.16
EBI3-202ENST00000599339 POU2F2P09086 479 aa16.05■□□□□ 0.16
EBI3-202ENST00000599339 FGFR3P22607 806 aa16.05■□□□□ 0.16
EBI3-202ENST00000599339 PTGDRQ13258 359 aa16.05■□□□□ 0.16
EBI3-202ENST00000599339 HTR4Q13639 388 aa16.05■□□□□ 0.16
EBI3-202ENST00000599339 GLRA4Q5JXX5 417 aa16.05■□□□□ 0.16
EBI3-202ENST00000599339 PHLDB3Q6NSJ2 640 aa16.05■□□□□ 0.16
EBI3-202ENST00000599339 MTSS1LQ765P7 747 aa16.05■□□□□ 0.16
EBI3-202ENST00000599339 RTL10Q7L3V2 364 aa16.05■□□□□ 0.16
EBI3-202ENST00000599339 ASCL5Q7RTU5 278 aa16.05■□□□□ 0.16
EBI3-202ENST00000599339 C4orf32Q8N8J7 132 aa16.05■□□□□ 0.16
EBI3-202ENST00000599339 IGSF22Q8N9C0 903 aa16.05■□□□□ 0.16
EBI3-202ENST00000599339 DRC1Q96MC2 740 aa16.05■□□□□ 0.16
EBI3-202ENST00000599339 PPP1R10Q96QC0 940 aaKnown RBP16.05■□□□□ 0.16
EBI3-202ENST00000599339 MRPL4Q9BYD3 311 aaKnown RBP16.05■□□□□ 0.16
EBI3-202ENST00000599339 TMEM134Q9H6X4 195 aa16.05■□□□□ 0.16
EBI3-202ENST00000599339 TBC1D17Q9HA65 648 aa16.05■□□□□ 0.16
EBI3-202ENST00000599339 ARHGEF3Q9NR81 526 aa16.05■□□□□ 0.16
EBI3-202ENST00000599339 SLC2A4RGQ9NR83 387 aa16.05■□□□□ 0.16
EBI3-202ENST00000599339 SLC38A7Q9NVC3 462 aa16.05■□□□□ 0.16
EBI3-202ENST00000599339 MTRRQ9UBK8 725 aa16.05■□□□□ 0.16
EBI3-202ENST00000599339 CDH7Q9ULB5 785 aa16.05■□□□□ 0.16
EBI3-202ENST00000599339 KIF3AQ9Y496 699 aa16.05■□□□□ 0.16
EBI3-202ENST00000599339 NUMBLQ9Y6R0 609 aa16.05■□□□□ 0.16
EBI3-202ENST00000599339 FAM186AA6NE01 2351 aa16.05■□□□□ 0.16
EBI3-202ENST00000599339 U2AF2P26368 475 aaKnown RBP eCLIP16.04■□□□□ 0.16
EBI3-202ENST00000599339 OR1D2P34982 312 aa16.04■□□□□ 0.16
EBI3-202ENST00000599339 GRM5P41594 1212 aa16.04■□□□□ 0.16
EBI3-202ENST00000599339 CLCNKBP51801 687 aa16.04■□□□□ 0.16
EBI3-202ENST00000599339 PEX3P56589 373 aa16.04■□□□□ 0.16
EBI3-202ENST00000599339 NBR1Q14596 966 aa16.04■□□□□ 0.16
EBI3-202ENST00000599339 ECM1Q16610 540 aa16.04■□□□□ 0.16
EBI3-202ENST00000599339 ZNF568Q3ZCX4 644 aa16.04■□□□□ 0.16
EBI3-202ENST00000599339 AXDND1Q5T1B0 1012 aaPredicted RBP16.04■□□□□ 0.16
EBI3-202ENST00000599339 ANKS3Q6ZW76 656 aa16.04■□□□□ 0.16
EBI3-202ENST00000599339 SLC7A14Q8TBB6 771 aa16.04■□□□□ 0.16
EBI3-202ENST00000599339 DDX27Q96GQ7 796 aaKnown RBP16.04■□□□□ 0.16
EBI3-202ENST00000599339 SHDQ96IW2 340 aa16.04■□□□□ 0.16
EBI3-202ENST00000599339 CXCL16Q9H2A7 254 aa16.04■□□□□ 0.16
EBI3-202ENST00000599339 C17orf75Q9HAS0 396 aa16.04■□□□□ 0.16
EBI3-202ENST00000599339 POLD4Q9HCU8 107 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms