RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 PPM1EQ8WY54 764 aa19.28■□□□□ 0.68
USHBP1-209ENST00000598570 STAMQ92783 540 aa19.28■□□□□ 0.68
USHBP1-209ENST00000598570 PAGE5Q96GU1 130 aa19.28■□□□□ 0.68
USHBP1-209ENST00000598570 ZMAT2Q96NC0 199 aaKnown RBP19.28■□□□□ 0.68
USHBP1-209ENST00000598570 FAM193BQ96PV7 902 aaPredicted RBP19.28■□□□□ 0.68
USHBP1-209ENST00000598570 ASB2Q96Q27 587 aa19.28■□□□□ 0.68
USHBP1-209ENST00000598570 TCHPQ9BT92 498 aa19.28■□□□□ 0.68
USHBP1-209ENST00000598570 COLEC11Q9BWP8 271 aa19.28■□□□□ 0.68
USHBP1-209ENST00000598570 FGFBP2Q9BYJ0 223 aa19.28■□□□□ 0.68
USHBP1-209ENST00000598570 MRPL44Q9H9J2 332 aaKnown RBP19.28■□□□□ 0.68
USHBP1-209ENST00000598570 TOPORSQ9NS56 1045 aaPredicted RBP19.28■□□□□ 0.68
USHBP1-209ENST00000598570 BDP1A6H8Y1 2624 aa19.28■□□□□ 0.68
USHBP1-209ENST00000598570 A0A1B0GVL5 298 aa19.27■□□□□ 0.68
USHBP1-209ENST00000598570 OGTO15294 1046 aa19.27■□□□□ 0.68
USHBP1-209ENST00000598570 KLRC4O43908 158 aa19.27■□□□□ 0.68
USHBP1-209ENST00000598570 BMP1P13497 986 aa19.27■□□□□ 0.68
USHBP1-209ENST00000598570 NDUFA8P51970 172 aa19.27■□□□□ 0.68
USHBP1-209ENST00000598570 MRPS5P82675 430 aaKnown RBP19.27■□□□□ 0.68
USHBP1-209ENST00000598570 KCNA1Q09470 495 aa19.27■□□□□ 0.68
USHBP1-209ENST00000598570 COASYQ13057 564 aa19.27■□□□□ 0.68
USHBP1-209ENST00000598570 TMEM132AQ24JP5 1023 aa19.27■□□□□ 0.68
USHBP1-209ENST00000598570 LEXMQ3ZCV2 418 aa19.27■□□□□ 0.68
USHBP1-209ENST00000598570 KIAA0319Q5VV43 1072 aa19.27■□□□□ 0.68
USHBP1-209ENST00000598570 ZBTB33Q86T24 672 aa19.27■□□□□ 0.68
USHBP1-209ENST00000598570 ZNF507Q8TCN5 953 aa19.27■□□□□ 0.68
USHBP1-209ENST00000598570 TMEM174Q8WUU8 243 aa19.27■□□□□ 0.68
USHBP1-209ENST00000598570 TCF25Q9BQ70 676 aa19.27■□□□□ 0.68
USHBP1-209ENST00000598570 ZHX3Q9H4I2 956 aa19.27■□□□□ 0.68
USHBP1-209ENST00000598570 UBE2ZQ9H832 354 aaPredicted RBP19.27■□□□□ 0.68
USHBP1-209ENST00000598570 SERTAD1Q9UHV2 236 aa19.27■□□□□ 0.68
USHBP1-209ENST00000598570 CPSF3Q9UKF6 684 aaKnown RBP19.27■□□□□ 0.68
USHBP1-209ENST00000598570 GDAQ9Y2T3 454 aa19.27■□□□□ 0.68
USHBP1-209ENST00000598570 PCDHGC5Q9Y5F6 944 aa19.27■□□□□ 0.68
USHBP1-209ENST00000598570 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.27■□□□□ 0.68
USHBP1-209ENST00000598570 CUL9Q8IWT3 2517 aa19.27■□□□□ 0.68
USHBP1-209ENST00000598570 HIDE1A8MVS5 230 aa19.26■□□□□ 0.67
USHBP1-209ENST00000598570 HNRNPDLO14979 420 aaKnown RBP19.26■□□□□ 0.67
USHBP1-209ENST00000598570 SOD2P04179 222 aa19.26■□□□□ 0.67
USHBP1-209ENST00000598570 LIG4P49917 911 aa19.26■□□□□ 0.67
USHBP1-209ENST00000598570 UPP1Q16831 310 aa19.26■□□□□ 0.67
USHBP1-209ENST00000598570 VPS52Q8N1B4 723 aa19.26■□□□□ 0.67
USHBP1-209ENST00000598570 MICALL1Q8N3F8 863 aa19.26■□□□□ 0.67
USHBP1-209ENST00000598570 PPP2R3CQ969Q6 453 aa19.26■□□□□ 0.67
USHBP1-209ENST00000598570 MSLNLQ96KJ4 702 aa19.26■□□□□ 0.67
USHBP1-209ENST00000598570 UROC1Q96N76 676 aa19.26■□□□□ 0.67
USHBP1-209ENST00000598570 ACCSQ96QU6 501 aa19.26■□□□□ 0.67
USHBP1-209ENST00000598570 RPS6KC1Q96S38 1066 aa19.26■□□□□ 0.67
USHBP1-209ENST00000598570 GBP3Q9H0R5 595 aa19.26■□□□□ 0.67
USHBP1-209ENST00000598570 RXFP1Q9HBX9 757 aa19.26■□□□□ 0.67
USHBP1-209ENST00000598570 EIF3DO15371 548 aaKnown RBP eCLIP19.25■□□□□ 0.67
USHBP1-209ENST00000598570 NR1I2O75469 434 aa19.25■□□□□ 0.67
USHBP1-209ENST00000598570 PAPLNO95428 1278 aa19.25■□□□□ 0.67
USHBP1-209ENST00000598570 MYBP10242 640 aa19.25■□□□□ 0.67
USHBP1-209ENST00000598570 IDEP14735 1019 aa19.25■□□□□ 0.67
USHBP1-209ENST00000598570 GTF2F1P35269 517 aaKnown RBP eCLIP19.25■□□□□ 0.67
USHBP1-209ENST00000598570 YARSP54577 528 aaKnown RBP19.25■□□□□ 0.67
USHBP1-209ENST00000598570 DSG1Q02413 1049 aa19.25■□□□□ 0.67
USHBP1-209ENST00000598570 HSP90AA2PQ14568 343 aaPredicted RBP19.25■□□□□ 0.67
USHBP1-209ENST00000598570 SMC1AQ14683 1233 aaKnown RBP19.25■□□□□ 0.67
USHBP1-209ENST00000598570 POSTNQ15063 836 aa19.25■□□□□ 0.67
USHBP1-209ENST00000598570 ENOX2Q16206 610 aaKnown RBP19.25■□□□□ 0.67
USHBP1-209ENST00000598570 BMT2Q1RMZ1 405 aa19.25■□□□□ 0.67
USHBP1-209ENST00000598570 AAK1Q2M2I8 961 aa19.25■□□□□ 0.67
USHBP1-209ENST00000598570 DCLRE1AQ6PJP8 1040 aa19.25■□□□□ 0.67
USHBP1-209ENST00000598570 CRELD2Q6UXH1 353 aaPredicted RBP19.25■□□□□ 0.67
USHBP1-209ENST00000598570 CD302Q8IX05 232 aa19.25■□□□□ 0.67
USHBP1-209ENST00000598570 ENGASEQ8NFI3 743 aa19.25■□□□□ 0.67
USHBP1-209ENST00000598570 PAAF1Q9BRP4 392 aa19.25■□□□□ 0.67
USHBP1-209ENST00000598570 HERC2P3Q9BVR0 1158 aa19.25■□□□□ 0.67
USHBP1-209ENST00000598570 GOLPH3LQ9H4A5 285 aa19.25■□□□□ 0.67
USHBP1-209ENST00000598570 SLC38A7Q9NVC3 462 aa19.25■□□□□ 0.67
USHBP1-209ENST00000598570 CLEC1BQ9P126 229 aa19.25■□□□□ 0.67
USHBP1-209ENST00000598570 ADAM28Q9UKQ2 775 aa19.25■□□□□ 0.67
USHBP1-209ENST00000598570 EXOC7Q9UPT5 735 aa19.25■□□□□ 0.67
USHBP1-209ENST00000598570 F8W810 466 aa19.24■□□□□ 0.67
USHBP1-209ENST00000598570 CXCL14O95715 111 aa19.24■□□□□ 0.67
USHBP1-209ENST00000598570 GLP2RO95838 553 aa19.24■□□□□ 0.67
USHBP1-209ENST00000598570 GARTP22102 1010 aa19.24■□□□□ 0.67
USHBP1-209ENST00000598570 RPL9P32969 192 aaKnown RBP19.24■□□□□ 0.67
USHBP1-209ENST00000598570 SYKP43405 635 aa19.24■□□□□ 0.67
USHBP1-209ENST00000598570 OR1G1P47890 313 aa19.24■□□□□ 0.67
USHBP1-209ENST00000598570 SOX4Q06945 474 aaPredicted RBP19.24■□□□□ 0.67
USHBP1-209ENST00000598570 CUL4BQ13620 913 aa19.24■□□□□ 0.67
USHBP1-209ENST00000598570 PTPN14Q15678 1187 aa19.24■□□□□ 0.67
USHBP1-209ENST00000598570 TAS1R1Q7RTX1 841 aa19.24■□□□□ 0.67
USHBP1-209ENST00000598570 TMC7Q7Z402 723 aa19.24■□□□□ 0.67
USHBP1-209ENST00000598570 VN1R2Q8NFZ6 395 aa19.24■□□□□ 0.67
USHBP1-209ENST00000598570 SLC22A17Q8WUG5 538 aa19.24■□□□□ 0.67
USHBP1-209ENST00000598570 DDX27Q96GQ7 796 aaKnown RBP19.24■□□□□ 0.67
USHBP1-209ENST00000598570 GPR62Q9BZJ7 368 aa19.24■□□□□ 0.67
USHBP1-209ENST00000598570 IKZF4Q9H2S9 585 aa19.24■□□□□ 0.67
USHBP1-209ENST00000598570 TLE6Q9H808 572 aa19.24■□□□□ 0.67
USHBP1-209ENST00000598570 TMEM206Q9H813 350 aa19.24■□□□□ 0.67
USHBP1-209ENST00000598570 ANKFY1Q9P2R3 1169 aa19.24■□□□□ 0.67
USHBP1-209ENST00000598570 ANK1P16157 1881 aa19.24■□□□□ 0.67
USHBP1-209ENST00000598570 TISP43B9A030 160 aa19.23■□□□□ 0.67
USHBP1-209ENST00000598570 CYP3A5P20815 502 aa19.23■□□□□ 0.67
USHBP1-209ENST00000598570 NRIP1P48552 1158 aa19.23■□□□□ 0.67
USHBP1-209ENST00000598570 SNRPFP62306 86 aaKnown RBP19.23■□□□□ 0.67
USHBP1-209ENST00000598570 TFF2Q03403 129 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms