RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 STK39Q9UEW8 545 aa15.14■□□□□ 0.01
UPF1-205ENST00000598209 SERTAD1Q9UHV2 236 aa15.14■□□□□ 0.01
UPF1-205ENST00000598209 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.13■□□□□ 0.01
UPF1-205ENST00000598209 C2orf71A6NGG8 1288 aa15.13■□□□□ 0.01
UPF1-205ENST00000598209 ANKRD63C9JTQ0 380 aa15.13■□□□□ 0.01
UPF1-205ENST00000598209 PER2O15055 1255 aa15.13■□□□□ 0.01
UPF1-205ENST00000598209 LINC01565O15544 149 aa15.13■□□□□ 0.01
UPF1-205ENST00000598209 ACTN4O43707 911 aaKnown RBP15.13■□□□□ 0.01
UPF1-205ENST00000598209 CXCL14O95715 111 aa15.13■□□□□ 0.01
UPF1-205ENST00000598209 SLFN14P0C7P3 912 aa15.13■□□□□ 0.01
UPF1-205ENST00000598209 MYBP10242 640 aa15.13■□□□□ 0.01
UPF1-205ENST00000598209 CTSAP10619 480 aa15.13■□□□□ 0.01
UPF1-205ENST00000598209 KCNA5P22460 613 aa15.13■□□□□ 0.01
UPF1-205ENST00000598209 CASP1P29466 404 aa15.13■□□□□ 0.01
UPF1-205ENST00000598209 CA8P35219 290 aa15.13■□□□□ 0.01
UPF1-205ENST00000598209 AFMP43652 599 aa15.13■□□□□ 0.01
UPF1-205ENST00000598209 CASP5P51878 434 aa15.13■□□□□ 0.01
UPF1-205ENST00000598209 ALCAMQ13740 583 aa15.13■□□□□ 0.01
UPF1-205ENST00000598209 DUSP6Q16828 381 aa15.13■□□□□ 0.01
UPF1-205ENST00000598209 CTC1Q2NKJ3 1217 aa15.13■□□□□ 0.01
UPF1-205ENST00000598209 XKR4Q5GH76 650 aa15.13■□□□□ 0.01
UPF1-205ENST00000598209 L1TD1Q5T7N2 865 aaKnown RBP15.13■□□□□ 0.01
UPF1-205ENST00000598209 ALKAL1Q6UXT8 129 aa15.13■□□□□ 0.01
UPF1-205ENST00000598209 EFHBQ8N7U6 833 aa15.13■□□□□ 0.01
UPF1-205ENST00000598209 MRPL43Q8N983 215 aaKnown RBP15.13■□□□□ 0.01
UPF1-205ENST00000598209 AUTS2Q8WXX7 1259 aa15.13■□□□□ 0.01
UPF1-205ENST00000598209 PAAF1Q9BRP4 392 aa15.13■□□□□ 0.01
UPF1-205ENST00000598209 FGFBP2Q9BYJ0 223 aa15.13■□□□□ 0.01
UPF1-205ENST00000598209 HPSEQ9Y251 543 aa15.13■□□□□ 0.01
UPF1-205ENST00000598209 PCDHB13Q9Y5F0 798 aa15.13■□□□□ 0.01
UPF1-205ENST00000598209 A0A0B4J269 797 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 FAM237AA0A1B0GTK4 181 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 SMIM28A0A1B0GU29 152 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 A0A1W2PQ27 194 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 A0A1W2PQ64 194 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 A0A1W2PQD8 194 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 TISP43B9A030 160 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 OGTO15294 1046 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 MEFVO15553 781 aaPredicted RBP15.12■□□□□ 0.01
UPF1-205ENST00000598209 CLTAP09496 248 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 KCNE1P15382 129 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 LTBRP36941 435 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 ANP32AP39687 249 aaKnown RBP15.12■□□□□ 0.01
UPF1-205ENST00000598209 TNFSF9P41273 254 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 KCNQ1P51787 676 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 KCNA1Q09470 495 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 ADAM15Q13444 863 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 HSP90AA2PQ14568 343 aaPredicted RBP15.12■□□□□ 0.01
UPF1-205ENST00000598209 SLC10A6Q3KNW5 377 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 TJAP1Q5JTD0 557 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 SLFN12LQ6IEE8 588 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 GRAMD1CQ8IYS0 662 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 FSIP1Q8NA03 581 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 ZMAT2Q96NC0 199 aaKnown RBP15.12■□□□□ 0.01
UPF1-205ENST00000598209 ACCSQ96QU6 501 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 CDCA3Q99618 268 aaPredicted RBP15.12■□□□□ 0.01
UPF1-205ENST00000598209 MSTO1Q9BUK6 570 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 HERC2P3Q9BVR0 1158 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 BLZF1Q9H2G9 400 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 IKZF4Q9H2S9 585 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 CNTN3Q9P232 1028 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 USP25Q9UHP3 1055 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 ADAM28Q9UKQ2 775 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 EXOC7Q9UPT5 735 aa15.12■□□□□ 0.01
UPF1-205ENST00000598209 VWA8A3KMH1 1905 aa15.11■□□□□ 0.01
UPF1-205ENST00000598209 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.11■□□□□ 0.01
UPF1-205ENST00000598209 FSD2A1L4K1 749 aa15.11■□□□□ 0.01
UPF1-205ENST00000598209 H3BQ06 376 aaPredicted RBP15.11■□□□□ 0.01
UPF1-205ENST00000598209 FAM189A1O60320 539 aa15.11■□□□□ 0.01
UPF1-205ENST00000598209 TBX10O75333 385 aa15.11■□□□□ 0.01
UPF1-205ENST00000598209 PRPF6O94906 941 aaKnown RBP15.11■□□□□ 0.01
UPF1-205ENST00000598209 EFEMP2O95967 443 aa15.11■□□□□ 0.01
UPF1-205ENST00000598209 SOD2P04179 222 aa15.11■□□□□ 0.01
UPF1-205ENST00000598209 CXCL8P10145 99 aa15.11■□□□□ 0.01
UPF1-205ENST00000598209 SYKP43405 635 aa15.11■□□□□ 0.01
UPF1-205ENST00000598209 NDUFV1P49821 464 aa15.11■□□□□ 0.01
UPF1-205ENST00000598209 NDUFA8P51970 172 aa15.11■□□□□ 0.01
UPF1-205ENST00000598209 DLX2Q07687 328 aaPredicted RBP15.11■□□□□ 0.01
UPF1-205ENST00000598209 CUL4BQ13620 913 aa15.11■□□□□ 0.01
UPF1-205ENST00000598209 PTPN14Q15678 1187 aa15.11■□□□□ 0.01
UPF1-205ENST00000598209 KYAT1Q16773 422 aa15.11■□□□□ 0.01
UPF1-205ENST00000598209 LEXMQ3ZCV2 418 aa15.11■□□□□ 0.01
UPF1-205ENST00000598209 ZBTB41Q5SVQ8 909 aa15.11■□□□□ 0.01
UPF1-205ENST00000598209 FUT10Q6P4F1 479 aa15.11■□□□□ 0.01
UPF1-205ENST00000598209 UNC13DQ70J99 1090 aa15.11■□□□□ 0.01
UPF1-205ENST00000598209 TAS1R1Q7RTX1 841 aa15.11■□□□□ 0.01
UPF1-205ENST00000598209 RNF168Q8IYW5 571 aaPredicted RBP15.11■□□□□ 0.01
UPF1-205ENST00000598209 SYCP3Q8IZU3 236 aa15.11■□□□□ 0.01
UPF1-205ENST00000598209 HASPINQ8TF76 798 aa15.11■□□□□ 0.01
UPF1-205ENST00000598209 HPS3Q969F9 1004 aa15.11■□□□□ 0.01
UPF1-205ENST00000598209 PAGE5Q96GU1 130 aa15.11■□□□□ 0.01
UPF1-205ENST00000598209 SLC38A7Q9NVC3 462 aa15.11■□□□□ 0.01
UPF1-205ENST00000598209 CIZ1Q9ULV3 898 aaPredicted RBP15.11■□□□□ 0.01
UPF1-205ENST00000598209 IRAK3Q9Y616 596 aa15.11■□□□□ 0.01
UPF1-205ENST00000598209 STYXL1Q9Y6J8 313 aa15.11■□□□□ 0.01
UPF1-205ENST00000598209 TADA2AO75478 443 aa15.1■□□□□ 0.01
UPF1-205ENST00000598209 KIF4AO95239 1232 aa15.1■□□□□ 0.01
UPF1-205ENST00000598209 GLP2RO95838 553 aa15.1■□□□□ 0.01
UPF1-205ENST00000598209 URODP06132 367 aa15.1■□□□□ 0.01
UPF1-205ENST00000598209 RBM10P98175 930 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms