RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 PDZD7Q9H5P4 517 aa18.76■□□□□ 0.59
PNKP-210ENST00000597965 GPRC5CQ9NQ84 441 aa18.76■□□□□ 0.59
PNKP-210ENST00000597965 SNTG2Q9NY99 539 aa18.76■□□□□ 0.59
PNKP-210ENST00000597965 STK24Q9Y6E0 443 aa18.76■□□□□ 0.59
PNKP-210ENST00000597965 NUMBLQ9Y6R0 609 aa18.76■□□□□ 0.59
PNKP-210ENST00000597965 SPTBN4Q9H254 2564 aa18.76■□□□□ 0.59
PNKP-210ENST00000597965 RECQL4O94761 1208 aa18.75■□□□□ 0.59
PNKP-210ENST00000597965 KIF4AO95239 1232 aa18.75■□□□□ 0.59
PNKP-210ENST00000597965 PRKCBP05771 671 aa18.75■□□□□ 0.59
PNKP-210ENST00000597965 CYP11B2P19099 503 aa18.75■□□□□ 0.59
PNKP-210ENST00000597965 PFKPQ01813 784 aa18.75■□□□□ 0.59
PNKP-210ENST00000597965 PADI6Q6TGC4 694 aa18.75■□□□□ 0.59
PNKP-210ENST00000597965 PRSS55Q6UWB4 352 aaPredicted RBP18.75■□□□□ 0.59
PNKP-210ENST00000597965 GRASPQ7Z6J2 395 aaPredicted RBP18.75■□□□□ 0.59
PNKP-210ENST00000597965 LNX1Q8TBB1 728 aaPredicted RBP18.75■□□□□ 0.59
PNKP-210ENST00000597965 UROC1Q96N76 676 aa18.75■□□□□ 0.59
PNKP-210ENST00000597965 CLSTN3Q9BQT9 956 aa18.75■□□□□ 0.59
PNKP-210ENST00000597965 DMDP11532 3685 aa18.75■□□□□ 0.59
PNKP-210ENST00000597965 PHLPP2Q6ZVD8 1323 aa18.74■□□□□ 0.59
PNKP-210ENST00000597965 TMEM189-UBE2V1I3L0A0 370 aa18.74■□□□□ 0.59
PNKP-210ENST00000597965 ID4P47928 161 aa18.74■□□□□ 0.59
PNKP-210ENST00000597965 HASPINQ8TF76 798 aa18.74■□□□□ 0.59
PNKP-210ENST00000597965 RABGGTAQ92696 567 aa18.74■□□□□ 0.59
PNKP-210ENST00000597965 KIFAP3Q92845 792 aa18.74■□□□□ 0.59
PNKP-210ENST00000597965 PAAF1Q9BRP4 392 aa18.74■□□□□ 0.59
PNKP-210ENST00000597965 KCNH3Q9ULD8 1083 aa18.74■□□□□ 0.59
PNKP-210ENST00000597965 POLIQ9UNA4 740 aa18.74■□□□□ 0.59
PNKP-210ENST00000597965 PTGESO14684 152 aa18.73■□□□□ 0.59
PNKP-210ENST00000597965 MED24O75448 989 aa18.73■□□□□ 0.59
PNKP-210ENST00000597965 B3GAT3O94766 335 aa18.73■□□□□ 0.59
PNKP-210ENST00000597965 OR52Z1P0C646 297 aa18.73■□□□□ 0.59
PNKP-210ENST00000597965 NEK4P51957 841 aa18.73■□□□□ 0.59
PNKP-210ENST00000597965 STARD6P59095 220 aa18.73■□□□□ 0.59
PNKP-210ENST00000597965 PRKCQQ04759 706 aa18.73■□□□□ 0.59
PNKP-210ENST00000597965 RAB33AQ14088 237 aa18.73■□□□□ 0.59
PNKP-210ENST00000597965 AXDND1Q5T1B0 1012 aaPredicted RBP18.73■□□□□ 0.59
PNKP-210ENST00000597965 NOSTRINQ8IVI9 506 aa18.73■□□□□ 0.59
PNKP-210ENST00000597965 C1orf210Q8IVY1 113 aa18.73■□□□□ 0.59
PNKP-210ENST00000597965 PJA1Q8NG27 643 aa18.73■□□□□ 0.59
PNKP-210ENST00000597965 RAB34Q9BZG1 259 aa18.73■□□□□ 0.59
PNKP-210ENST00000597965 CCDC113Q9H0I3 377 aa18.73■□□□□ 0.59
PNKP-210ENST00000597965 TMEM60Q9H2L4 133 aa18.73■□□□□ 0.59
PNKP-210ENST00000597965 FOXP1Q9H334 677 aaPredicted RBP18.73■□□□□ 0.59
PNKP-210ENST00000597965 TOPORSQ9NS56 1045 aaPredicted RBP18.73■□□□□ 0.59
PNKP-210ENST00000597965 A0A087WWV3 80 aa18.72■□□□□ 0.59
PNKP-210ENST00000597965 MAGEA9P43362 315 aa18.72■□□□□ 0.59
PNKP-210ENST00000597965 GNL2Q13823 731 aaKnown RBP18.72■□□□□ 0.59
PNKP-210ENST00000597965 SPECC1Q5M775 1068 aa18.72■□□□□ 0.59
PNKP-210ENST00000597965 POTEGQ6S5H5 508 aa18.72■□□□□ 0.59
PNKP-210ENST00000597965 RSPO2Q6UXX9 243 aaPredicted RBP18.72■□□□□ 0.59
PNKP-210ENST00000597965 ANKS3Q6ZW76 656 aa18.72■□□□□ 0.59
PNKP-210ENST00000597965 SLC7A14Q8TBB6 771 aa18.72■□□□□ 0.59
PNKP-210ENST00000597965 FGF13Q92913 245 aa18.72■□□□□ 0.59
PNKP-210ENST00000597965 BCO2Q9BYV7 579 aa18.72■□□□□ 0.59
PNKP-210ENST00000597965 SLC38A7Q9NVC3 462 aa18.72■□□□□ 0.59
PNKP-210ENST00000597965 GVINP1Q7Z2Y8 2422 aa18.72■□□□□ 0.59
PNKP-210ENST00000597965 KANSL1LA0AUZ9 987 aa18.71■□□□□ 0.59
PNKP-210ENST00000597965 K7ERI5 159 aa18.71■□□□□ 0.59
PNKP-210ENST00000597965 CCL16O15467 120 aa18.71■□□□□ 0.59
PNKP-210ENST00000597965 JAK2O60674 1132 aa18.71■□□□□ 0.59
PNKP-210ENST00000597965 DTNBO60941 627 aa18.71■□□□□ 0.59
PNKP-210ENST00000597965 DCNP07585 359 aaKnown RBP18.71■□□□□ 0.59
PNKP-210ENST00000597965 LIG1P18858 919 aa18.71■□□□□ 0.59
PNKP-210ENST00000597965 FGFR3P22607 806 aa18.71■□□□□ 0.59
PNKP-210ENST00000597965 OR1D2P34982 312 aa18.71■□□□□ 0.59
PNKP-210ENST00000597965 TRAPPC10P48553 1259 aa18.71■□□□□ 0.59
PNKP-210ENST00000597965 YARSP54577 528 aaKnown RBP18.71■□□□□ 0.59
PNKP-210ENST00000597965 NAB2Q15742 525 aa18.71■□□□□ 0.59
PNKP-210ENST00000597965 PABPC1LQ4VXU2 614 aaKnown RBP18.71■□□□□ 0.59
PNKP-210ENST00000597965 ATF7IP2Q5U623 682 aa18.71■□□□□ 0.59
PNKP-210ENST00000597965 FGF14Q92915 247 aa18.71■□□□□ 0.59
PNKP-210ENST00000597965 DDX27Q96GQ7 796 aaKnown RBP18.71■□□□□ 0.59
PNKP-210ENST00000597965 C8orf76Q96K31 380 aa18.71■□□□□ 0.59
PNKP-210ENST00000597965 OSBPL6Q9BZF3 934 aa18.71■□□□□ 0.59
PNKP-210ENST00000597965 MTRRQ9UBK8 725 aa18.71■□□□□ 0.59
PNKP-210ENST00000597965 CACNG4Q9UBN1 327 aa18.71■□□□□ 0.59
PNKP-210ENST00000597965 GDAQ9Y2T3 454 aa18.71■□□□□ 0.59
PNKP-210ENST00000597965 BACE2Q9Y5Z0 518 aa18.71■□□□□ 0.59
PNKP-210ENST00000597965 WNT7AO00755 349 aa18.7■□□□□ 0.58
PNKP-210ENST00000597965 LARGE1O95461 756 aa18.7■□□□□ 0.58
PNKP-210ENST00000597965 FOSBP53539 338 aa18.7■□□□□ 0.58
PNKP-210ENST00000597965 GPC5P78333 572 aa18.7■□□□□ 0.58
PNKP-210ENST00000597965 PARM1Q6UWI2 310 aa18.7■□□□□ 0.58
PNKP-210ENST00000597965 NELL2Q99435 816 aa18.7■□□□□ 0.58
PNKP-210ENST00000597965 LLPHQ9BRT6 129 aaKnown RBP18.7■□□□□ 0.58
PNKP-210ENST00000597965 CCDC94Q9BW85 323 aaPredicted RBP18.7■□□□□ 0.58
PNKP-210ENST00000597965 GDE1Q9NZC3 331 aa18.7■□□□□ 0.58
PNKP-210ENST00000597965 DLGAP2Q9P1A6 1054 aa18.7■□□□□ 0.58
PNKP-210ENST00000597965 NOL7Q9UMY1 257 aaKnown RBP18.7■□□□□ 0.58
PNKP-210ENST00000597965 MYH15Q9Y2K3 1946 aa18.69■□□□□ 0.58
PNKP-210ENST00000597965 NCAM2O15394 837 aa18.69■□□□□ 0.58
PNKP-210ENST00000597965 CCT6AP40227 531 aaKnown RBP18.69■□□□□ 0.58
PNKP-210ENST00000597965 FXR2P51116 673 aaKnown RBP eCLIP18.69■□□□□ 0.58
PNKP-210ENST00000597965 PDIA5Q14554 519 aa18.69■□□□□ 0.58
PNKP-210ENST00000597965 MLF2Q15773 248 aaPredicted RBP18.69■□□□□ 0.58
PNKP-210ENST00000597965 UPP1Q16831 310 aa18.69■□□□□ 0.58
PNKP-210ENST00000597965 ZNF528Q3MIS6 628 aa18.69■□□□□ 0.58
PNKP-210ENST00000597965 BSNDQ8WZ55 320 aa18.69■□□□□ 0.58
PNKP-210ENST00000597965 PPP1R10Q96QC0 940 aaKnown RBP18.69■□□□□ 0.58
PNKP-210ENST00000597965 HINFPQ9BQA5 517 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms