RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 ELAC2Q9BQ52 826 aaKnown RBP17.66■□□□□ 0.42
LIG1-206ENST00000594067 TAOK3Q9H2K8 898 aa17.66■□□□□ 0.42
LIG1-206ENST00000594067 UBIAD1Q9Y5Z9 338 aa17.66■□□□□ 0.42
LIG1-206ENST00000594067 MAPK13O15264 365 aa17.65■□□□□ 0.42
LIG1-206ENST00000594067 EIF2AK2P19525 551 aaKnown RBP17.65■□□□□ 0.42
LIG1-206ENST00000594067 PTGER2P43116 358 aa17.65■□□□□ 0.42
LIG1-206ENST00000594067 IFNAR2P48551 515 aa17.65■□□□□ 0.42
LIG1-206ENST00000594067 CDR2Q01850 454 aa17.65■□□□□ 0.42
LIG1-206ENST00000594067 AUHQ13825 339 aaKnown RBP17.65■□□□□ 0.42
LIG1-206ENST00000594067 XKR9Q5GH70 373 aa17.65■□□□□ 0.42
LIG1-206ENST00000594067 PARD3BQ8TEW8 1205 aa17.65■□□□□ 0.42
LIG1-206ENST00000594067 FAM84AQ96KN4 292 aa17.65■□□□□ 0.42
LIG1-206ENST00000594067 ATP6V0A4Q9HBG4 840 aa17.65■□□□□ 0.42
LIG1-206ENST00000594067 BAIAP2L1Q9UHR4 511 aa17.65■□□□□ 0.42
LIG1-206ENST00000594067 ECEL1O95672 775 aa17.65■□□□□ 0.42
LIG1-206ENST00000594067 NCKAP1LP55160 1127 aa17.65■□□□□ 0.42
LIG1-206ENST00000594067 PHLDB2Q86SQ0 1253 aa17.65■□□□□ 0.42
LIG1-206ENST00000594067 CCDC63Q8NA47 563 aa17.65■□□□□ 0.42
LIG1-206ENST00000594067 DDX23Q9BUQ8 820 aaKnown RBP17.65■□□□□ 0.42
LIG1-206ENST00000594067 ZBTB12Q9Y330 459 aaPredicted RBP17.65■□□□□ 0.42
LIG1-206ENST00000594067 MYCLP12524 364 aaPredicted RBP17.65■□□□□ 0.42
LIG1-206ENST00000594067 SCP2P22307 547 aa17.65■□□□□ 0.42
LIG1-206ENST00000594067 TNFAIP8L3Q5GJ75 292 aa17.65■□□□□ 0.42
LIG1-206ENST00000594067 CYFIP1Q7L576 1253 aa17.65■□□□□ 0.42
LIG1-206ENST00000594067 TRPM8Q7Z2W7 1104 aa17.65■□□□□ 0.42
LIG1-206ENST00000594067 C7orf43Q8WVR3 580 aa17.65■□□□□ 0.42
LIG1-206ENST00000594067 NT5C1BQ96P26 610 aa17.65■□□□□ 0.42
LIG1-206ENST00000594067 DEFB129Q9H1M3 183 aa17.65■□□□□ 0.42
LIG1-206ENST00000594067 ST6GALNAC4Q9H4F1 302 aa17.65■□□□□ 0.42
LIG1-206ENST00000594067 SAMD15Q9P1V8 674 aa17.65■□□□□ 0.42
LIG1-206ENST00000594067 TBX20Q9UMR3 447 aa17.65■□□□□ 0.42
LIG1-206ENST00000594067 USP20Q9Y2K6 914 aa17.65■□□□□ 0.42
LIG1-206ENST00000594067 PMM2O15305 246 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 ATP9AO75110 1047 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 CNGA1P29973 690 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 CALCOCO2Q13137 446 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 LONRF1Q17RB8 773 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 PSPC1Q8WXF1 523 aaKnown RBP17.64■□□□□ 0.41
LIG1-206ENST00000594067 TAAR1Q96RJ0 339 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 TMEM109Q9BVC6 243 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 RAVER2Q9HCJ3 691 aaKnown RBP17.64■□□□□ 0.41
LIG1-206ENST00000594067 UVRAGQ9P2Y5 699 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 LYPLA2O95372 231 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 ACSL3O95573 720 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 VIMP08670 466 aaKnown RBP17.64■□□□□ 0.41
LIG1-206ENST00000594067 KRT5P13647 590 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 SOX10P56693 466 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 KRT17Q04695 432 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 DGKZQ13574 1117 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 SGO2Q562F6 1265 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 ACAD10Q6JQN1 1059 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 RSBN1LQ6PCB5 846 aaPredicted RBP17.64■□□□□ 0.41
LIG1-206ENST00000594067 NIPA1Q7RTP0 329 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 TMEM161BQ8NDZ6 487 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 SYTL5Q8TDW5 730 aaPredicted RBP17.64■□□□□ 0.41
LIG1-206ENST00000594067 TCP11Q8WWU5 503 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 DDX1Q92499 740 aaKnown RBP17.64■□□□□ 0.41
LIG1-206ENST00000594067 CNKSR1Q969H4 720 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 TBC1D31Q96DN5 1066 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 RUNDC3BQ96NL0 473 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 IWS1Q96ST2 819 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 PI4K2AQ9BTU6 479 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 ZNF341Q9BYN7 854 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 TRIM7Q9C029 511 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 CDC42EP4Q9H3Q1 356 aaKnown RBP17.64■□□□□ 0.41
LIG1-206ENST00000594067 TMEM8AQ9HCN3 771 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 RAB20Q9NX57 234 aa17.64■□□□□ 0.41
LIG1-206ENST00000594067 GPC3P51654 580 aa17.63■□□□□ 0.41
LIG1-206ENST00000594067 ACCSLQ4AC99 568 aa17.63■□□□□ 0.41
LIG1-206ENST00000594067 PCNX4Q63HM2 1172 aa17.63■□□□□ 0.41
LIG1-206ENST00000594067 C12orf50Q8NA57 414 aaPredicted RBP17.63■□□□□ 0.41
LIG1-206ENST00000594067 FBXL13Q8NEE6 735 aa17.63■□□□□ 0.41
LIG1-206ENST00000594067 ATG4AQ8WYN0 398 aa17.63■□□□□ 0.41
LIG1-206ENST00000594067 LRRC19Q9H756 370 aa17.63■□□□□ 0.41
LIG1-206ENST00000594067 CHST7Q9NS84 486 aa17.63■□□□□ 0.41
LIG1-206ENST00000594067 DNAJC17Q9NVM6 304 aaKnown RBP17.63■□□□□ 0.41
LIG1-206ENST00000594067 ANAPC7Q9UJX3 599 aa17.63■□□□□ 0.41
LIG1-206ENST00000594067 SCAF8Q9UPN6 1271 aaKnown RBP17.63■□□□□ 0.41
LIG1-206ENST00000594067 DENND3A2RUS2 1198 aa17.63■□□□□ 0.41
LIG1-206ENST00000594067 GRIN3BO60391 1043 aa17.63■□□□□ 0.41
LIG1-206ENST00000594067 CHRM1P11229 460 aaPredicted RBP17.63■□□□□ 0.41
LIG1-206ENST00000594067 NPTX2P47972 431 aa17.63■□□□□ 0.41
LIG1-206ENST00000594067 RIPK1Q13546 671 aa17.63■□□□□ 0.41
LIG1-206ENST00000594067 TRIP13Q15645 432 aaPredicted RBP17.63■□□□□ 0.41
LIG1-206ENST00000594067 SPDYE2Q495Y8 402 aa17.63■□□□□ 0.41
LIG1-206ENST00000594067 FAM133BQ5BKY9 247 aaKnown RBP17.63■□□□□ 0.41
LIG1-206ENST00000594067 OTUD6AQ7L8S5 288 aa17.63■□□□□ 0.41
LIG1-206ENST00000594067 CROCCP2Q86T23 111 aa17.63■□□□□ 0.41
LIG1-206ENST00000594067 TBC1D1Q86TI0 1168 aaPredicted RBP17.63■□□□□ 0.41
LIG1-206ENST00000594067 C4orf19Q8IY42 314 aa17.63■□□□□ 0.41
LIG1-206ENST00000594067 AAASQ9NRG9 546 aa17.63■□□□□ 0.41
LIG1-206ENST00000594067 ABCF3Q9NUQ8 709 aa17.63■□□□□ 0.41
LIG1-206ENST00000594067 ASIC3Q9UHC3 531 aa17.63■□□□□ 0.41
LIG1-206ENST00000594067 TCEAL9Q9UHQ7 104 aa17.63■□□□□ 0.41
LIG1-206ENST00000594067 AGAP1Q9UPQ3 857 aa17.63■□□□□ 0.41
LIG1-206ENST00000594067 EXOC7Q9UPT5 735 aa17.63■□□□□ 0.41
LIG1-206ENST00000594067 COQ4Q9Y3A0 265 aa17.63■□□□□ 0.41
LIG1-206ENST00000594067 CCNE2O96020 404 aa17.62■□□□□ 0.41
LIG1-206ENST00000594067 CLTAP09496 248 aa17.62■□□□□ 0.41
LIG1-206ENST00000594067 MAPK4P31152 587 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms