RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 OSTNP61366 133 aa21.39■■□□□ 1.01
LSM4-203ENST00000593829 SLFN12LQ6IEE8 588 aa21.39■■□□□ 1.01
LSM4-203ENST00000593829 SLC39A4Q6P5W5 647 aa21.39■■□□□ 1.01
LSM4-203ENST00000593829 KCNT2Q6UVM3 1135 aa21.39■■□□□ 1.01
LSM4-203ENST00000593829 SYCP3Q8IZU3 236 aa21.39■■□□□ 1.01
LSM4-203ENST00000593829 GSTCDQ8NEC7 633 aa21.39■■□□□ 1.01
LSM4-203ENST00000593829 TIGD1Q96MW7 591 aa21.39■■□□□ 1.01
LSM4-203ENST00000593829 ZNF558Q96NG5 402 aa21.39■■□□□ 1.01
LSM4-203ENST00000593829 HAPLN2Q9GZV7 340 aa21.39■■□□□ 1.01
LSM4-203ENST00000593829 GBP3Q9H0R5 595 aa21.39■■□□□ 1.01
LSM4-203ENST00000593829 CLSTN2Q9H4D0 955 aa21.39■■□□□ 1.01
LSM4-203ENST00000593829 NRDE2Q9H7Z3 1164 aa21.39■■□□□ 1.01
LSM4-203ENST00000593829 TMEM206Q9H813 350 aa21.39■■□□□ 1.01
LSM4-203ENST00000593829 TOPORSQ9NS56 1045 aaPredicted RBP21.39■■□□□ 1.01
LSM4-203ENST00000593829 MIOSQ9NXC5 875 aa21.39■■□□□ 1.01
LSM4-203ENST00000593829 EIF3DO15371 548 aaKnown RBP eCLIP21.38■■□□□ 1.01
LSM4-203ENST00000593829 LPXNO60711 386 aa21.38■■□□□ 1.01
LSM4-203ENST00000593829 ZC3H11AO75152 810 aaKnown RBP eCLIP21.38■■□□□ 1.01
LSM4-203ENST00000593829 FOSL2P15408 326 aa21.38■■□□□ 1.01
LSM4-203ENST00000593829 ALDH7A1P49419 539 aaKnown RBP21.38■■□□□ 1.01
LSM4-203ENST00000593829 DPYDQ12882 1025 aa21.38■■□□□ 1.01
LSM4-203ENST00000593829 KMT5BQ4FZB7 885 aa21.38■■□□□ 1.01
LSM4-203ENST00000593829 ZNF280BQ86YH2 543 aa21.38■■□□□ 1.01
LSM4-203ENST00000593829 GLIS3Q8NEA6 775 aa21.38■■□□□ 1.01
LSM4-203ENST00000593829 ACAP3Q96P50 834 aa21.38■■□□□ 1.01
LSM4-203ENST00000593829 A0A0B4J269 797 aa21.37■■□□□ 1.01
LSM4-203ENST00000593829 CARNS1A5YM72 827 aa21.37■■□□□ 1.01
LSM4-203ENST00000593829 ANKRD63C9JTQ0 380 aa21.37■■□□□ 1.01
LSM4-203ENST00000593829 NR1I2O75469 434 aa21.37■■□□□ 1.01
LSM4-203ENST00000593829 RPN1P04843 607 aaKnown RBP21.37■■□□□ 1.01
LSM4-203ENST00000593829 IGFBP4P22692 258 aa21.37■■□□□ 1.01
LSM4-203ENST00000593829 BCAR1P56945 870 aa21.37■■□□□ 1.01
LSM4-203ENST00000593829 PSMD2Q13200 908 aa21.37■■□□□ 1.01
LSM4-203ENST00000593829 ADGRE1Q14246 886 aa21.37■■□□□ 1.01
LSM4-203ENST00000593829 POSTNQ15063 836 aa21.37■■□□□ 1.01
LSM4-203ENST00000593829 EPM2AIP1Q7L775 607 aaPredicted RBP21.37■■□□□ 1.01
LSM4-203ENST00000593829 KLHL23Q8NBE8 558 aa21.37■■□□□ 1.01
LSM4-203ENST00000593829 CCDC47Q96A33 483 aaKnown RBP21.37■■□□□ 1.01
LSM4-203ENST00000593829 MSTO1Q9BUK6 570 aa21.37■■□□□ 1.01
LSM4-203ENST00000593829 SLC39A2Q9NP94 309 aa21.37■■□□□ 1.01
LSM4-203ENST00000593829 STYXL1Q9Y6J8 313 aa21.37■■□□□ 1.01
LSM4-203ENST00000593829 KIAA1671Q9BY89 1806 aa21.37■■□□□ 1.01
LSM4-203ENST00000593829 DDHD2O94830 711 aa21.37■■□□□ 1.01
LSM4-203ENST00000593829 CDC25BP30305 580 aa21.37■■□□□ 1.01
LSM4-203ENST00000593829 PPM1AP35813 382 aa21.37■■□□□ 1.01
LSM4-203ENST00000593829 PLCB2Q00722 1185 aa21.37■■□□□ 1.01
LSM4-203ENST00000593829 GRIK3Q13003 919 aa21.37■■□□□ 1.01
LSM4-203ENST00000593829 KYAT1Q16773 422 aa21.37■■□□□ 1.01
LSM4-203ENST00000593829 PDCL2Q8N4E4 241 aa21.37■■□□□ 1.01
LSM4-203ENST00000593829 IKZF4Q9H2S9 585 aa21.37■■□□□ 1.01
LSM4-203ENST00000593829 PLAGL2Q9UPG8 496 aa21.37■■□□□ 1.01
LSM4-203ENST00000593829 OGTO15294 1046 aa21.36■■□□□ 1.01
LSM4-203ENST00000593829 PBX3P40426 434 aa21.36■■□□□ 1.01
LSM4-203ENST00000593829 ZNF507Q8TCN5 953 aa21.36■■□□□ 1.01
LSM4-203ENST00000593829 TSC1Q92574 1164 aa21.36■■□□□ 1.01
LSM4-203ENST00000593829 CBX8Q9HC52 389 aa21.36■■□□□ 1.01
LSM4-203ENST00000593829 SPG21Q9NZD8 308 aa21.36■■□□□ 1.01
LSM4-203ENST00000593829 DNAJB4Q9UDY4 337 aa21.36■■□□□ 1.01
LSM4-203ENST00000593829 HOOK1Q9UJC3 728 aaKnown RBP21.36■■□□□ 1.01
LSM4-203ENST00000593829 TISP43B9A030 160 aa21.35■■□□□ 1.01
LSM4-203ENST00000593829 KINO60870 393 aaKnown RBP21.35■■□□□ 1.01
LSM4-203ENST00000593829 ITGB1P05556 798 aa21.35■■□□□ 1.01
LSM4-203ENST00000593829 CLTAP09496 248 aa21.35■■□□□ 1.01
LSM4-203ENST00000593829 POU3F3P20264 500 aaPredicted RBP21.35■■□□□ 1.01
LSM4-203ENST00000593829 SEZ6Q53EL9 994 aa21.35■■□□□ 1.01
LSM4-203ENST00000593829 POMGNT1Q8WZA1 660 aa21.35■■□□□ 1.01
LSM4-203ENST00000593829 TMEM175Q9BSA9 504 aa21.35■■□□□ 1.01
LSM4-203ENST00000593829 ALG13Q9NP73 1137 aaKnown RBP21.35■■□□□ 1.01
LSM4-203ENST00000593829 LMCD1Q9NZU5 365 aa21.35■■□□□ 1.01
LSM4-203ENST00000593829 STXBP5LQ9Y2K9 1186 aa21.35■■□□□ 1.01
LSM4-203ENST00000593829 TRANK1O15050 2925 aa21.35■■□□□ 1.01
LSM4-203ENST00000593829 UBE4BO95155 1302 aa21.35■■□□□ 1.01
LSM4-203ENST00000593829 MYO9BQ13459 2157 aa21.35■■□□□ 1.01
LSM4-203ENST00000593829 PTGESO14684 152 aa21.35■■□□□ 1.01
LSM4-203ENST00000593829 B4GALT3O60512 393 aa21.35■■□□□ 1.01
LSM4-203ENST00000593829 FGF18O76093 207 aa21.35■■□□□ 1.01
LSM4-203ENST00000593829 ALDH2P05091 517 aa21.35■■□□□ 1.01
LSM4-203ENST00000593829 THP07101 528 aa21.35■■□□□ 1.01
LSM4-203ENST00000593829 GALTP07902 379 aa21.35■■□□□ 1.01
LSM4-203ENST00000593829 ZNF75DP51815 510 aa21.35■■□□□ 1.01
LSM4-203ENST00000593829 DSC1Q08554 894 aa21.35■■□□□ 1.01
LSM4-203ENST00000593829 PTPROQ16827 1216 aa21.35■■□□□ 1.01
LSM4-203ENST00000593829 COLGALT2Q8IYK4 626 aa21.35■■□□□ 1.01
LSM4-203ENST00000593829 SPC24Q8NBT2 197 aa21.35■■□□□ 1.01
LSM4-203ENST00000593829 SCFD1Q8WVM8 642 aa21.35■■□□□ 1.01
LSM4-203ENST00000593829 CXCL16Q9H2A7 254 aa21.35■■□□□ 1.01
LSM4-203ENST00000593829 COL4A4P53420 1690 aaPredicted RBP21.35■■□□□ 1.01
LSM4-203ENST00000593829 GRM6O15303 877 aa21.34■■□□□ 1.01
LSM4-203ENST00000593829 ADSSP30520 456 aa21.34■■□□□ 1.01
LSM4-203ENST00000593829 SLC11A1P49279 550 aa21.34■■□□□ 1.01
LSM4-203ENST00000593829 STK4Q13043 487 aa21.34■■□□□ 1.01
LSM4-203ENST00000593829 PNOCQ13519 176 aa21.34■■□□□ 1.01
LSM4-203ENST00000593829 ALKAL1Q6UXT8 129 aa21.34■■□□□ 1.01
LSM4-203ENST00000593829 ELOA2Q8IYF1 753 aaPredicted RBP21.34■■□□□ 1.01
LSM4-203ENST00000593829 SLC39A11Q8N1S5 342 aa21.34■■□□□ 1.01
LSM4-203ENST00000593829 SPPL3Q8TCT6 385 aa21.34■■□□□ 1.01
LSM4-203ENST00000593829 SNX27Q96L92 541 aa21.34■■□□□ 1.01
LSM4-203ENST00000593829 LMAN2LQ9H0V9 348 aa21.34■■□□□ 1.01
LSM4-203ENST00000593829 AGO2Q9UKV8 859 aaKnown RBP21.34■■□□□ 1.01
LSM4-203ENST00000593829 MTCH2Q9Y6C9 303 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms