RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 TTC38Q5R3I4 469 aa24.97■■□□□ 1.59
SSBP4-203ENST00000593641 CCDC83Q8IWF9 413 aa24.97■■□□□ 1.59
SSBP4-203ENST00000593641 DTWD2Q8NBA8 298 aa24.97■■□□□ 1.59
SSBP4-203ENST00000593641 DAXXQ9UER7 740 aaPredicted RBP24.97■■□□□ 1.59
SSBP4-203ENST00000593641 LIMCH1Q9UPQ0 1083 aa24.97■■□□□ 1.59
SSBP4-203ENST00000593641 GDAQ9Y2T3 454 aa24.97■■□□□ 1.59
SSBP4-203ENST00000593641 ZFP37Q9Y6Q3 630 aaPredicted RBP24.97■■□□□ 1.59
SSBP4-203ENST00000593641 KRBA1A5PL33 1030 aa24.96■■□□□ 1.59
SSBP4-203ENST00000593641 FSHRP23945 695 aa24.96■■□□□ 1.59
SSBP4-203ENST00000593641 EFNA5P52803 228 aa24.96■■□□□ 1.59
SSBP4-203ENST00000593641 PPM1LQ5SGD2 360 aa24.96■■□□□ 1.59
SSBP4-203ENST00000593641 APBB1IPQ7Z5R6 666 aaPredicted RBP24.96■■□□□ 1.59
SSBP4-203ENST00000593641 LNX1Q8TBB1 728 aaPredicted RBP24.96■■□□□ 1.59
SSBP4-203ENST00000593641 CLSTN3Q9BQT9 956 aa24.96■■□□□ 1.59
SSBP4-203ENST00000593641 LLPHQ9BRT6 129 aaKnown RBP24.96■■□□□ 1.59
SSBP4-203ENST00000593641 USP20Q9Y2K6 914 aa24.96■■□□□ 1.59
SSBP4-203ENST00000593641 GVINP1Q7Z2Y8 2422 aa24.95■■□□□ 1.59
SSBP4-203ENST00000593641 C8AP07357 584 aa24.95■■□□□ 1.58
SSBP4-203ENST00000593641 HNRNPA1P09651 372 aaKnown RBP eCLIP24.95■■□□□ 1.58
SSBP4-203ENST00000593641 CCT6AP40227 531 aaKnown RBP24.95■■□□□ 1.58
SSBP4-203ENST00000593641 HTR4Q13639 388 aa24.95■■□□□ 1.58
SSBP4-203ENST00000593641 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.95■■□□□ 1.58
SSBP4-203ENST00000593641 GRASPQ7Z6J2 395 aaPredicted RBP24.95■■□□□ 1.58
SSBP4-203ENST00000593641 GPR152Q8TDT2 470 aa24.95■■□□□ 1.58
SSBP4-203ENST00000593641 KIFAP3Q92845 792 aa24.95■■□□□ 1.58
SSBP4-203ENST00000593641 KIFC3Q9BVG8 833 aa24.95■■□□□ 1.58
SSBP4-203ENST00000593641 TBC1D17Q9HA65 648 aa24.95■■□□□ 1.58
SSBP4-203ENST00000593641 NOL7Q9UMY1 257 aaKnown RBP24.95■■□□□ 1.58
SSBP4-203ENST00000593641 NUMBLQ9Y6R0 609 aa24.95■■□□□ 1.58
SSBP4-203ENST00000593641 ANHXE9PGG2 379 aa24.94■■□□□ 1.58
SSBP4-203ENST00000593641 TRAPPC10P48553 1259 aa24.94■■□□□ 1.58
SSBP4-203ENST00000593641 RBM25P49756 843 aaKnown RBP24.94■■□□□ 1.58
SSBP4-203ENST00000593641 HMGN5P82970 282 aaKnown RBP24.94■■□□□ 1.58
SSBP4-203ENST00000593641 NAB2Q15742 525 aa24.94■■□□□ 1.58
SSBP4-203ENST00000593641 ATF7IP2Q5U623 682 aa24.94■■□□□ 1.58
SSBP4-203ENST00000593641 EEF1DP3Q658K8 133 aa24.94■■□□□ 1.58
SSBP4-203ENST00000593641 FAM184AQ8NB25 1140 aa24.94■■□□□ 1.58
SSBP4-203ENST00000593641 BHMT2Q9H2M3 363 aa24.94■■□□□ 1.58
SSBP4-203ENST00000593641 POLIQ9UNA4 740 aa24.94■■□□□ 1.58
SSBP4-203ENST00000593641 CITO14578 2027 aa24.93■■□□□ 1.58
SSBP4-203ENST00000593641 XYLBO75191 536 aa24.93■■□□□ 1.58
SSBP4-203ENST00000593641 EDN1P05305 212 aa24.93■■□□□ 1.58
SSBP4-203ENST00000593641 HOXA9P31269 272 aa24.93■■□□□ 1.58
SSBP4-203ENST00000593641 FBXO18Q8NFZ0 1043 aa24.93■■□□□ 1.58
SSBP4-203ENST00000593641 CXCL16Q9H2A7 254 aa24.93■■□□□ 1.58
SSBP4-203ENST00000593641 ARHGEF3Q9NR81 526 aa24.93■■□□□ 1.58
SSBP4-203ENST00000593641 LRWD1Q9UFC0 647 aa24.93■■□□□ 1.58
SSBP4-203ENST00000593641 CDH7Q9ULB5 785 aa24.93■■□□□ 1.58
SSBP4-203ENST00000593641 MIA3Q5JRA6 1907 aa24.92■■□□□ 1.58
SSBP4-203ENST00000593641 B3GAT3O94766 335 aa24.92■■□□□ 1.58
SSBP4-203ENST00000593641 FXR2P51116 673 aaKnown RBP eCLIP24.92■■□□□ 1.58
SSBP4-203ENST00000593641 GLRA4Q5JXX5 417 aa24.92■■□□□ 1.58
SSBP4-203ENST00000593641 RAB34Q9BZG1 259 aa24.92■■□□□ 1.58
SSBP4-203ENST00000593641 SLC2A4RGQ9NR83 387 aa24.92■■□□□ 1.58
SSBP4-203ENST00000593641 KIAA1024Q9UPX6 916 aa24.92■■□□□ 1.58
SSBP4-203ENST00000593641 STK24Q9Y6E0 443 aa24.92■■□□□ 1.58
SSBP4-203ENST00000593641 EP300Q09472 2414 aaPredicted RBP24.92■■□□□ 1.58
SSBP4-203ENST00000593641 TMEM189-UBE2V1I3L0A0 370 aa24.91■■□□□ 1.58
SSBP4-203ENST00000593641 K7ERI5 159 aa24.91■■□□□ 1.58
SSBP4-203ENST00000593641 CCL16O15467 120 aa24.91■■□□□ 1.58
SSBP4-203ENST00000593641 ECM1Q16610 540 aa24.91■■□□□ 1.58
SSBP4-203ENST00000593641 AXDND1Q5T1B0 1012 aaPredicted RBP24.91■■□□□ 1.58
SSBP4-203ENST00000593641 PHLDB3Q6NSJ2 640 aa24.91■■□□□ 1.58
SSBP4-203ENST00000593641 SLC7A14Q8TBB6 771 aa24.91■■□□□ 1.58
SSBP4-203ENST00000593641 UROC1Q96N76 676 aa24.91■■□□□ 1.58
SSBP4-203ENST00000593641 POLD4Q9HCU8 107 aa24.91■■□□□ 1.58
SSBP4-203ENST00000593641 ADAM12O43184 909 aa24.9■■□□□ 1.58
SSBP4-203ENST00000593641 TRAPPC3O43617 180 aa24.9■■□□□ 1.58
SSBP4-203ENST00000593641 FGFR3P22607 806 aa24.9■■□□□ 1.58
SSBP4-203ENST00000593641 OR1D2P34982 312 aa24.9■■□□□ 1.58
SSBP4-203ENST00000593641 NTHL1P78549 312 aa24.9■■□□□ 1.58
SSBP4-203ENST00000593641 RAB33AQ14088 237 aa24.9■■□□□ 1.58
SSBP4-203ENST00000593641 NT5DC1Q5TFE4 455 aa24.9■■□□□ 1.58
SSBP4-203ENST00000593641 DCLRE1AQ6PJP8 1040 aa24.9■■□□□ 1.58
SSBP4-203ENST00000593641 MTSS1LQ765P7 747 aa24.9■■□□□ 1.58
SSBP4-203ENST00000593641 ST13P5Q8NFI4 369 aaPredicted RBP24.9■■□□□ 1.58
SSBP4-203ENST00000593641 SNX29Q8TEQ0 813 aa24.9■■□□□ 1.58
SSBP4-203ENST00000593641 PPP1R10Q96QC0 940 aaKnown RBP24.9■■□□□ 1.58
SSBP4-203ENST00000593641 DDX19AQ9NUU7 478 aaKnown RBP24.9■■□□□ 1.58
SSBP4-203ENST00000593641 MTRRQ9UBK8 725 aa24.9■■□□□ 1.58
SSBP4-203ENST00000593641 CACNA1IQ9P0X4 2223 aa24.9■■□□□ 1.58
SSBP4-203ENST00000593641 PHLPP2Q6ZVD8 1323 aa24.89■■□□□ 1.58
SSBP4-203ENST00000593641 MYH11P35749 1972 aa24.89■■□□□ 1.58
SSBP4-203ENST00000593641 CCDC169A6NNP5 214 aa24.89■■□□□ 1.58
SSBP4-203ENST00000593641 CLCNKBP51801 687 aa24.89■■□□□ 1.58
SSBP4-203ENST00000593641 YARSP54577 528 aaKnown RBP24.89■■□□□ 1.58
SSBP4-203ENST00000593641 UVSSAQ2YD98 709 aa24.89■■□□□ 1.58
SSBP4-203ENST00000593641 SPECC1Q5M775 1068 aa24.89■■□□□ 1.58
SSBP4-203ENST00000593641 ADSSL1Q8N142 457 aa24.89■■□□□ 1.58
SSBP4-203ENST00000593641 FGF13Q92913 245 aa24.89■■□□□ 1.58
SSBP4-203ENST00000593641 FGF14Q92915 247 aa24.89■■□□□ 1.58
SSBP4-203ENST00000593641 SNX27Q96L92 541 aa24.89■■□□□ 1.58
SSBP4-203ENST00000593641 ZSCAN31Q96LW9 406 aaPredicted RBP24.89■■□□□ 1.58
SSBP4-203ENST00000593641 CCDC94Q9BW85 323 aaPredicted RBP24.89■■□□□ 1.58
SSBP4-203ENST00000593641 TOPORSQ9NS56 1045 aaPredicted RBP24.89■■□□□ 1.58
SSBP4-203ENST00000593641 TNFSF13BQ9Y275 285 aa24.89■■□□□ 1.58
SSBP4-203ENST00000593641 SIT1Q9Y3P8 196 aa24.89■■□□□ 1.58
SSBP4-203ENST00000593641 NOTCH4Q99466 2003 aa24.88■■□□□ 1.57
SSBP4-203ENST00000593641 SEC24BO95487 1268 aa24.88■■□□□ 1.57
SSBP4-203ENST00000593641 POU2F2P09086 479 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms