RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 TSSK4Q6SA08 328 aa12.4□□□□□ -0.42
PRKCSH-220ENST00000593104 CYP26C1Q6V0L0 522 aa12.4□□□□□ -0.42
PRKCSH-220ENST00000593104 HDAC7Q8WUI4 952 aa12.4□□□□□ -0.42
PRKCSH-220ENST00000593104 TTPALQ9BTX7 342 aa12.4□□□□□ -0.42
PRKCSH-220ENST00000593104 RHOBTB2Q9BYZ6 727 aa12.4□□□□□ -0.42
PRKCSH-220ENST00000593104 PLA2G2FQ9BZM2 168 aa12.4□□□□□ -0.42
PRKCSH-220ENST00000593104 SLC2A4RGQ9NR83 387 aa12.4□□□□□ -0.42
PRKCSH-220ENST00000593104 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.4□□□□□ -0.42
PRKCSH-220ENST00000593104 DNMT3BQ9UBC3 853 aaKnown RBP12.4□□□□□ -0.42
PRKCSH-220ENST00000593104 DPP7Q9UHL4 492 aa12.4□□□□□ -0.42
PRKCSH-220ENST00000593104 CDH7Q9ULB5 785 aa12.4□□□□□ -0.42
PRKCSH-220ENST00000593104 NEMFO60524 1076 aa12.39□□□□□ -0.43
PRKCSH-220ENST00000593104 XBP1P17861 261 aa12.39□□□□□ -0.43
PRKCSH-220ENST00000593104 MCM7P33993 719 aa12.39□□□□□ -0.43
PRKCSH-220ENST00000593104 OR1D2P34982 312 aa12.39□□□□□ -0.43
PRKCSH-220ENST00000593104 BRCC3P46736 316 aa12.39□□□□□ -0.43
PRKCSH-220ENST00000593104 FOXK2Q01167 660 aa12.39□□□□□ -0.43
PRKCSH-220ENST00000593104 POU5F1BQ06416 359 aa12.39□□□□□ -0.43
PRKCSH-220ENST00000593104 ST3GAL1Q11201 340 aa12.39□□□□□ -0.43
PRKCSH-220ENST00000593104 MLF2Q15773 248 aaPredicted RBP12.39□□□□□ -0.43
PRKCSH-220ENST00000593104 SLC5A9Q2M3M2 681 aa12.39□□□□□ -0.43
PRKCSH-220ENST00000593104 LIN9Q5TKA1 542 aa12.39□□□□□ -0.43
PRKCSH-220ENST00000593104 CD300LGQ6UXG3 332 aa12.39□□□□□ -0.43
PRKCSH-220ENST00000593104 ERMP1Q7Z2K6 904 aa12.39□□□□□ -0.43
PRKCSH-220ENST00000593104 CATSPER3Q86XQ3 398 aa12.39□□□□□ -0.43
PRKCSH-220ENST00000593104 DIS3L2Q8IYB7 885 aaKnown RBP12.39□□□□□ -0.43
PRKCSH-220ENST00000593104 HACE1Q8IYU2 909 aa12.39□□□□□ -0.43
PRKCSH-220ENST00000593104 FAM177A1Q8N128 213 aaPredicted RBP12.39□□□□□ -0.43
PRKCSH-220ENST00000593104 C3orf58Q8NDZ4 430 aa12.39□□□□□ -0.43
PRKCSH-220ENST00000593104 PIK3R5Q8WYR1 880 aa12.39□□□□□ -0.43
PRKCSH-220ENST00000593104 MTMR9Q96QG7 549 aa12.39□□□□□ -0.43
PRKCSH-220ENST00000593104 NFKBIZQ9BYH8 718 aa12.39□□□□□ -0.43
PRKCSH-220ENST00000593104 FZD8Q9H461 694 aa12.39□□□□□ -0.43
PRKCSH-220ENST00000593104 SPATA6Q9NWH7 488 aaPredicted RBP12.39□□□□□ -0.43
PRKCSH-220ENST00000593104 GVINP1Q7Z2Y8 2422 aa12.38□□□□□ -0.43
PRKCSH-220ENST00000593104 PRKCBP05771 671 aa12.38□□□□□ -0.43
PRKCSH-220ENST00000593104 THP07101 528 aa12.38□□□□□ -0.43
PRKCSH-220ENST00000593104 TKTP29401 623 aaKnown RBP12.38□□□□□ -0.43
PRKCSH-220ENST00000593104 STARD6P59095 220 aa12.38□□□□□ -0.43
PRKCSH-220ENST00000593104 SOX4Q06945 474 aaPredicted RBP12.38□□□□□ -0.43
PRKCSH-220ENST00000593104 PRPF4BQ13523 1007 aaKnown RBP12.38□□□□□ -0.43
PRKCSH-220ENST00000593104 PCBP1Q15365 356 aaKnown RBP eCLIP12.38□□□□□ -0.431e-6■■□□□ 12.7
PRKCSH-220ENST00000593104 ECM1Q16610 540 aa12.38□□□□□ -0.43
PRKCSH-220ENST00000593104 SLC44A4Q53GD3 710 aa12.38□□□□□ -0.43
PRKCSH-220ENST00000593104 AXDND1Q5T1B0 1012 aaPredicted RBP12.38□□□□□ -0.43
PRKCSH-220ENST00000593104 CDCA2Q69YH5 1023 aaPredicted RBP12.38□□□□□ -0.43
PRKCSH-220ENST00000593104 PPP4R3CPQ6ZMV5 832 aa12.38□□□□□ -0.43
PRKCSH-220ENST00000593104 NPAS3Q8IXF0 933 aa12.38□□□□□ -0.43
PRKCSH-220ENST00000593104 CEP120Q8N960 986 aa12.38□□□□□ -0.43
PRKCSH-220ENST00000593104 SUMF1Q8NBK3 374 aa12.38□□□□□ -0.43
PRKCSH-220ENST00000593104 NSUN7Q8NE18 718 aaKnown RBP12.38□□□□□ -0.43
PRKCSH-220ENST00000593104 NXPE3Q969Y0 559 aa12.38□□□□□ -0.43
PRKCSH-220ENST00000593104 MCRS1Q96EZ8 462 aa12.38□□□□□ -0.43
PRKCSH-220ENST00000593104 NAP1L4Q99733 375 aaKnown RBP12.38□□□□□ -0.43
PRKCSH-220ENST00000593104 CCDC113Q9H0I3 377 aa12.38□□□□□ -0.43
PRKCSH-220ENST00000593104 PRMT7Q9NVM4 692 aaPredicted RBP12.38□□□□□ -0.43
PRKCSH-220ENST00000593104 CDY1Q9Y6F8 540 aa12.38□□□□□ -0.43
PRKCSH-220ENST00000593104 EP300Q09472 2414 aaPredicted RBP12.37□□□□□ -0.43
PRKCSH-220ENST00000593104 KANSL1LA0AUZ9 987 aa12.37□□□□□ -0.43
PRKCSH-220ENST00000593104 SHISA7A6NL88 538 aa12.37□□□□□ -0.43
PRKCSH-220ENST00000593104 FAM170BA6NMN3 283 aa12.37□□□□□ -0.43
PRKCSH-220ENST00000593104 N4BP3O15049 544 aa12.37□□□□□ -0.43
PRKCSH-220ENST00000593104 CEBPBP17676 345 aa12.37□□□□□ -0.43
PRKCSH-220ENST00000593104 TARSP26639 723 aaKnown RBP12.37□□□□□ -0.43
PRKCSH-220ENST00000593104 CLCNKBP51801 687 aa12.37□□□□□ -0.43
PRKCSH-220ENST00000593104 OSTNP61366 133 aa12.37□□□□□ -0.43
PRKCSH-220ENST00000593104 CSTF1Q05048 431 aaKnown RBP12.37□□□□□ -0.43
PRKCSH-220ENST00000593104 GRM2Q14416 872 aa12.37□□□□□ -0.43
PRKCSH-220ENST00000593104 NT5DC1Q5TFE4 455 aa12.37□□□□□ -0.43
PRKCSH-220ENST00000593104 PADI6Q6TGC4 694 aa12.37□□□□□ -0.43
PRKCSH-220ENST00000593104 TPRG1Q6ZUI0 275 aa12.37□□□□□ -0.43
PRKCSH-220ENST00000593104 DGLUCYQ7Z3D6 616 aa12.37□□□□□ -0.43
PRKCSH-220ENST00000593104 ZBTB8OSQ8IWT0 167 aa12.37□□□□□ -0.43
PRKCSH-220ENST00000593104 DDX27Q96GQ7 796 aaKnown RBP12.37□□□□□ -0.43
PRKCSH-220ENST00000593104 LTB4R2Q9NPC1 389 aa12.37□□□□□ -0.43
PRKCSH-220ENST00000593104 B3GAT3O94766 335 aa12.36□□□□□ -0.43
PRKCSH-220ENST00000593104 FGFR3P22607 806 aa12.36□□□□□ -0.43
PRKCSH-220ENST00000593104 ARPP19P56211 112 aa12.36□□□□□ -0.43
PRKCSH-220ENST00000593104 CREMQ03060 361 aa12.36□□□□□ -0.43
PRKCSH-220ENST00000593104 NBR1Q14596 966 aa12.36□□□□□ -0.43
PRKCSH-220ENST00000593104 ZNF174Q15697 407 aa12.36□□□□□ -0.43
PRKCSH-220ENST00000593104 FAM187BQ17R55 369 aa12.36□□□□□ -0.43
PRKCSH-220ENST00000593104 PABPC1LQ4VXU2 614 aaKnown RBP12.36□□□□□ -0.43
PRKCSH-220ENST00000593104 DEPTORQ8TB45 409 aa12.36□□□□□ -0.43
PRKCSH-220ENST00000593104 GTF3C6Q969F1 213 aa12.36□□□□□ -0.43
PRKCSH-220ENST00000593104 TCEAL4Q96EI5 215 aa12.36□□□□□ -0.43
PRKCSH-220ENST00000593104 DDX23Q9BUQ8 820 aaKnown RBP12.36□□□□□ -0.43
PRKCSH-220ENST00000593104 BRMS1Q9HCU9 246 aa12.36□□□□□ -0.43
PRKCSH-220ENST00000593104 HEBP1Q9NRV9 189 aa12.36□□□□□ -0.43
PRKCSH-220ENST00000593104 MTRRQ9UBK8 725 aa12.36□□□□□ -0.43
PRKCSH-220ENST00000593104 RHOP08100 348 aa12.35□□□□□ -0.43
PRKCSH-220ENST00000593104 HNRNPA1P09651 372 aaKnown RBP eCLIP12.35□□□□□ -0.43
PRKCSH-220ENST00000593104 GJA1P17302 382 aa12.35□□□□□ -0.43
PRKCSH-220ENST00000593104 RAB33AQ14088 237 aa12.35□□□□□ -0.43
PRKCSH-220ENST00000593104 LPAL2Q16609 132 aa12.35□□□□□ -0.43
PRKCSH-220ENST00000593104 MAPK6Q16659 721 aa12.35□□□□□ -0.43
PRKCSH-220ENST00000593104 RSPO4Q2I0M5 234 aaPredicted RBP12.35□□□□□ -0.43
PRKCSH-220ENST00000593104 TANGO2Q6ICL3 276 aa12.35□□□□□ -0.43
PRKCSH-220ENST00000593104 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.35□□□□□ -0.43
PRKCSH-220ENST00000593104 GPR65Q8IYL9 337 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms