RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 CXCL16Q9H2A7 254 aa17.74■□□□□ 0.43
CIRBP-241ENST00000593048 MFSD1Q9H3U5 465 aa17.74■□□□□ 0.43
CIRBP-241ENST00000593048 SMOC2Q9H3U7 446 aa17.74■□□□□ 0.43
CIRBP-241ENST00000593048 TMEM134Q9H6X4 195 aa17.74■□□□□ 0.43
CIRBP-241ENST00000593048 WDR6Q9NNW5 1121 aaKnown RBP17.74■□□□□ 0.43
CIRBP-241ENST00000593048 SMC3Q9UQE7 1217 aa17.74■□□□□ 0.43
CIRBP-241ENST00000593048 TNFSF13BQ9Y275 285 aa17.74■□□□□ 0.43
CIRBP-241ENST00000593048 VWA3AA6NCI4 1184 aa17.73■□□□□ 0.43
CIRBP-241ENST00000593048 PDGFBP01127 241 aaPredicted RBP17.73■□□□□ 0.43
CIRBP-241ENST00000593048 VCPP55072 806 aaKnown RBP17.73■□□□□ 0.43
CIRBP-241ENST00000593048 OSTNP61366 133 aa17.73■□□□□ 0.43
CIRBP-241ENST00000593048 ATP2C1P98194 919 aaPredicted RBP17.73■□□□□ 0.43
CIRBP-241ENST00000593048 PSMD5Q16401 504 aa17.73■□□□□ 0.43
CIRBP-241ENST00000593048 ZNF568Q3ZCX4 644 aa17.73■□□□□ 0.43
CIRBP-241ENST00000593048 GLRA4Q5JXX5 417 aa17.73■□□□□ 0.43
CIRBP-241ENST00000593048 PRSS33Q8NF86 280 aa17.73■□□□□ 0.43
CIRBP-241ENST00000593048 PLIN2Q99541 437 aa17.73■□□□□ 0.43
CIRBP-241ENST00000593048 ACO2Q99798 780 aaKnown RBP17.73■□□□□ 0.43
CIRBP-241ENST00000593048 RUSC1Q9BVN2 902 aa17.73■□□□□ 0.43
CIRBP-241ENST00000593048 TIPINQ9BVW5 301 aa17.73■□□□□ 0.43
CIRBP-241ENST00000593048 CCDC94Q9BW85 323 aaPredicted RBP17.73■□□□□ 0.43
CIRBP-241ENST00000593048 MRPL4Q9BYD3 311 aaKnown RBP17.73■□□□□ 0.43
CIRBP-241ENST00000593048 NT5C3AQ9H0P0 336 aa17.73■□□□□ 0.43
CIRBP-241ENST00000593048 C17orf75Q9HAS0 396 aa17.73■□□□□ 0.43
CIRBP-241ENST00000593048 ZDHHC7Q9NXF8 308 aa17.73■□□□□ 0.43
CIRBP-241ENST00000593048 KCNG1Q9UIX4 513 aa17.73■□□□□ 0.43
CIRBP-241ENST00000593048 SFI1A8K8P3 1242 aa17.72■□□□□ 0.43
CIRBP-241ENST00000593048 B3GAT3O94766 335 aa17.72■□□□□ 0.43
CIRBP-241ENST00000593048 RAD51AP2Q09MP3 1159 aa17.72■□□□□ 0.43
CIRBP-241ENST00000593048 TDGQ13569 410 aa17.72■□□□□ 0.43
CIRBP-241ENST00000593048 PDXDC1Q6P996 788 aa17.72■□□□□ 0.43
CIRBP-241ENST00000593048 LILRA6Q6PI73 481 aa17.72■□□□□ 0.43
CIRBP-241ENST00000593048 C1orf186Q6ZWK4 172 aa17.72■□□□□ 0.43
CIRBP-241ENST00000593048 KCNK18Q7Z418 384 aa17.72■□□□□ 0.43
CIRBP-241ENST00000593048 PHOX2BQ99453 314 aa17.72■□□□□ 0.43
CIRBP-241ENST00000593048 MMTAG2Q9BU76 263 aaKnown RBP17.72■□□□□ 0.43
CIRBP-241ENST00000593048 RHOBTB2Q9BYZ6 727 aa17.72■□□□□ 0.43
CIRBP-241ENST00000593048 PRKD2Q9BZL6 878 aa17.72■□□□□ 0.43
CIRBP-241ENST00000593048 KCNK12Q9HB15 430 aa17.72■□□□□ 0.43
CIRBP-241ENST00000593048 TOPORSQ9NS56 1045 aaPredicted RBP17.72■□□□□ 0.43
CIRBP-241ENST00000593048 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.72■□□□□ 0.43
CIRBP-241ENST00000593048 CACNA1HO95180 2353 aa17.72■□□□□ 0.43
CIRBP-241ENST00000593048 CLUHO75153 1309 aa17.72■□□□□ 0.43
CIRBP-241ENST00000593048 SLC16A4O15374 487 aa17.71■□□□□ 0.43
CIRBP-241ENST00000593048 CD2BP2O95400 341 aaKnown RBP17.71■□□□□ 0.43
CIRBP-241ENST00000593048 GRM5P41594 1212 aa17.71■□□□□ 0.43
CIRBP-241ENST00000593048 SMTNP53814 917 aa17.71■□□□□ 0.43
CIRBP-241ENST00000593048 STRN3Q13033 797 aa17.71■□□□□ 0.43
CIRBP-241ENST00000593048 NAB2Q15742 525 aa17.71■□□□□ 0.43
CIRBP-241ENST00000593048 LIN9Q5TKA1 542 aa17.71■□□□□ 0.43
CIRBP-241ENST00000593048 LARP1BQ659C4 914 aaKnown RBP17.71■□□□□ 0.43
CIRBP-241ENST00000593048 ARL6IP4Q66PJ3 421 aaKnown RBP17.71■□□□□ 0.43
CIRBP-241ENST00000593048 DCLRE1AQ6PJP8 1040 aa17.71■□□□□ 0.43
CIRBP-241ENST00000593048 DAW1Q8N136 415 aa17.71■□□□□ 0.43
CIRBP-241ENST00000593048 LNX1Q8TBB1 728 aaPredicted RBP17.71■□□□□ 0.43
CIRBP-241ENST00000593048 PIK3R5Q8WYR1 880 aa17.71■□□□□ 0.43
CIRBP-241ENST00000593048 UROC1Q96N76 676 aa17.71■□□□□ 0.43
CIRBP-241ENST00000593048 TARS2Q9BW92 718 aaKnown RBP17.71■□□□□ 0.43
CIRBP-241ENST00000593048 CDT1Q9H211 546 aa17.71■□□□□ 0.43
CIRBP-241ENST00000593048 IGSF9Q9P2J2 1179 aa17.71■□□□□ 0.43
CIRBP-241ENST00000593048 ARHGAP28Q9P2N2 729 aa17.71■□□□□ 0.43
CIRBP-241ENST00000593048 SMIM28A0A1B0GU29 152 aa17.7■□□□□ 0.42
CIRBP-241ENST00000593048 TRAPPC3O43617 180 aa17.7■□□□□ 0.42
CIRBP-241ENST00000593048 ZMYND10O75800 440 aa17.7■□□□□ 0.42
CIRBP-241ENST00000593048 HARSP12081 509 aaKnown RBP17.7■□□□□ 0.42
CIRBP-241ENST00000593048 GUCY2CP25092 1073 aa17.7■□□□□ 0.42
CIRBP-241ENST00000593048 CLCNKBP51801 687 aa17.7■□□□□ 0.42
CIRBP-241ENST00000593048 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.7■□□□□ 0.42
CIRBP-241ENST00000593048 KCTD17Q8N5Z5 321 aa17.7■□□□□ 0.42
CIRBP-241ENST00000593048 CEP120Q8N960 986 aa17.7■□□□□ 0.42
CIRBP-241ENST00000593048 ZNF707Q96C28 371 aaPredicted RBP17.7■□□□□ 0.42
CIRBP-241ENST00000593048 ACAP3Q96P50 834 aa17.7■□□□□ 0.42
CIRBP-241ENST00000593048 PPP1R10Q96QC0 940 aaKnown RBP17.7■□□□□ 0.42
CIRBP-241ENST00000593048 CLSTN3Q9BQT9 956 aa17.7■□□□□ 0.42
CIRBP-241ENST00000593048 SLC38A7Q9NVC3 462 aa17.7■□□□□ 0.42
CIRBP-241ENST00000593048 FBXL21Q9UKT6 434 aa17.7■□□□□ 0.42
CIRBP-241ENST00000593048 USP34Q70CQ2 3546 aa17.7■□□□□ 0.42
CIRBP-241ENST00000593048 PLA2G4BP0C869 781 aa17.69■□□□□ 0.42
CIRBP-241ENST00000593048 MCF2P10911 925 aa17.69■□□□□ 0.42
CIRBP-241ENST00000593048 MAPK7Q13164 816 aa17.69■□□□□ 0.42
CIRBP-241ENST00000593048 UPP1Q16831 310 aa17.69■□□□□ 0.42
CIRBP-241ENST00000593048 PPM1LQ5SGD2 360 aa17.69■□□□□ 0.42
CIRBP-241ENST00000593048 HYIQ5T013 277 aa17.69■□□□□ 0.42
CIRBP-241ENST00000593048 MPZL3Q6UWV2 235 aa17.69■□□□□ 0.42
CIRBP-241ENST00000593048 GET4Q7L5D6 327 aaPredicted RBP17.69■□□□□ 0.42
CIRBP-241ENST00000593048 TAS1R3Q7RTX0 852 aa17.69■□□□□ 0.42
CIRBP-241ENST00000593048 SYT2Q8N9I0 419 aaPredicted RBP17.69■□□□□ 0.42
CIRBP-241ENST00000593048 PNMA5Q96PV4 448 aa17.69■□□□□ 0.42
CIRBP-241ENST00000593048 IRF2BPLQ9H1B7 796 aa17.69■□□□□ 0.42
CIRBP-241ENST00000593048 GOLGA2P5Q9HBQ8 144 aa17.69■□□□□ 0.42
CIRBP-241ENST00000593048 PTPRHQ9HD43 1115 aa17.69■□□□□ 0.42
CIRBP-241ENST00000593048 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.69■□□□□ 0.42
CIRBP-241ENST00000593048 FBXW11Q9UKB1 542 aa17.69■□□□□ 0.42
CIRBP-241ENST00000593048 TMEM189-UBE2V1I3L0A0 370 aa17.68■□□□□ 0.42
CIRBP-241ENST00000593048 K7ELQ4 463 aaPredicted RBP17.68■□□□□ 0.42
CIRBP-241ENST00000593048 N4BP1O75113 896 aaKnown RBP17.68■□□□□ 0.42
CIRBP-241ENST00000593048 PLS3P13797 630 aa17.68■□□□□ 0.42
CIRBP-241ENST00000593048 OR1D2P34982 312 aa17.68■□□□□ 0.42
CIRBP-241ENST00000593048 MATR3P43243 847 aaKnown RBP eCLIP17.68■□□□□ 0.42
CIRBP-241ENST00000593048 NUBP1P53384 320 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms