RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 FMR1NBQ8N0W7 255 aaPredicted RBP16.74■□□□□ 0.27
TRIM47-206ENST00000592942 BICD1Q96G01 975 aa16.74■□□□□ 0.27
TRIM47-206ENST00000592942 FAM193BQ96PV7 902 aaPredicted RBP16.74■□□□□ 0.27
TRIM47-206ENST00000592942 PPP1R10Q96QC0 940 aaKnown RBP16.74■□□□□ 0.27
TRIM47-206ENST00000592942 CCDC94Q9BW85 323 aaPredicted RBP16.74■□□□□ 0.27
TRIM47-206ENST00000592942 PCDHB13Q9Y5F0 798 aa16.74■□□□□ 0.27
TRIM47-206ENST00000592942 TDRD15B5MCY1 1934 aaKnown RBP16.74■□□□□ 0.27
TRIM47-206ENST00000592942 THP07101 528 aa16.73■□□□□ 0.27
TRIM47-206ENST00000592942 PRR29P0C7W0 189 aa16.73■□□□□ 0.27
TRIM47-206ENST00000592942 HARSP12081 509 aaKnown RBP16.73■□□□□ 0.27
TRIM47-206ENST00000592942 KRT17Q04695 432 aa16.73■□□□□ 0.27
TRIM47-206ENST00000592942 COL19A1Q14993 1142 aa16.73■□□□□ 0.27
TRIM47-206ENST00000592942 GLRA4Q5JXX5 417 aa16.73■□□□□ 0.27
TRIM47-206ENST00000592942 DDX53Q86TM3 631 aaKnown RBP16.73■□□□□ 0.27
TRIM47-206ENST00000592942 RNF168Q8IYW5 571 aaPredicted RBP16.73■□□□□ 0.27
TRIM47-206ENST00000592942 ZSWIM2Q8NEG5 633 aa16.73■□□□□ 0.27
TRIM47-206ENST00000592942 ZNF507Q8TCN5 953 aa16.73■□□□□ 0.27
TRIM47-206ENST00000592942 RABGGTAQ92696 567 aa16.73■□□□□ 0.27
TRIM47-206ENST00000592942 SNX27Q96L92 541 aa16.73■□□□□ 0.27
TRIM47-206ENST00000592942 ACCSQ96QU6 501 aa16.73■□□□□ 0.27
TRIM47-206ENST00000592942 RPS6KC1Q96S38 1066 aa16.73■□□□□ 0.27
TRIM47-206ENST00000592942 NSUN3Q9H649 340 aaKnown RBP16.73■□□□□ 0.27
TRIM47-206ENST00000592942 TLR9Q9NR96 1032 aa16.73■□□□□ 0.27
TRIM47-206ENST00000592942 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.72■□□□□ 0.27
TRIM47-206ENST00000592942 TTC26A0AVF1 554 aa16.72■□□□□ 0.27
TRIM47-206ENST00000592942 OGTO15294 1046 aa16.72■□□□□ 0.27
TRIM47-206ENST00000592942 GADD45BO75293 160 aaPredicted RBP16.72■□□□□ 0.27
TRIM47-206ENST00000592942 CSPG5O95196 566 aa16.72■□□□□ 0.27
TRIM47-206ENST00000592942 CLTAP09496 248 aa16.72■□□□□ 0.27
TRIM47-206ENST00000592942 KCNE1P15382 129 aa16.72■□□□□ 0.27
TRIM47-206ENST00000592942 GTF2F1P35269 517 aaKnown RBP eCLIP16.72■□□□□ 0.27
TRIM47-206ENST00000592942 OR1G1P47890 313 aa16.72■□□□□ 0.27
TRIM47-206ENST00000592942 SOX4Q06945 474 aaPredicted RBP16.72■□□□□ 0.27
TRIM47-206ENST00000592942 HYAL1Q12794 435 aa16.72■□□□□ 0.27
TRIM47-206ENST00000592942 TUSC3Q13454 348 aa16.72■□□□□ 0.27
TRIM47-206ENST00000592942 ALCAMQ13740 583 aa16.72■□□□□ 0.27
TRIM47-206ENST00000592942 FAM26FQ5R3K3 315 aa16.72■□□□□ 0.27
TRIM47-206ENST00000592942 CD300LGQ6UXG3 332 aa16.72■□□□□ 0.27
TRIM47-206ENST00000592942 CRELD2Q6UXH1 353 aaPredicted RBP16.72■□□□□ 0.27
TRIM47-206ENST00000592942 TAS1R1Q7RTX1 841 aa16.72■□□□□ 0.27
TRIM47-206ENST00000592942 CNTN3Q9P232 1028 aa16.72■□□□□ 0.27
TRIM47-206ENST00000592942 PUF60Q9UHX1 559 aaKnown RBP16.72■□□□□ 0.27
TRIM47-206ENST00000592942 CPSF3Q9UKF6 684 aaKnown RBP16.72■□□□□ 0.27
TRIM47-206ENST00000592942 PRG3Q9Y2Y8 225 aaPredicted RBP16.72■□□□□ 0.27
TRIM47-206ENST00000592942 CARNS1A5YM72 827 aa16.71■□□□□ 0.27
TRIM47-206ENST00000592942 CASTOR2A6NHX0 329 aa16.71■□□□□ 0.27
TRIM47-206ENST00000592942 HIDE1A8MVS5 230 aa16.71■□□□□ 0.27
TRIM47-206ENST00000592942 YARSP54577 528 aaKnown RBP16.71■□□□□ 0.27
TRIM47-206ENST00000592942 DPYDQ12882 1025 aa16.71■□□□□ 0.27
TRIM47-206ENST00000592942 STK4Q13043 487 aa16.71■□□□□ 0.27
TRIM47-206ENST00000592942 ZBTB6Q15916 424 aa16.71■□□□□ 0.27
TRIM47-206ENST00000592942 ENOX2Q16206 610 aaKnown RBP16.71■□□□□ 0.27
TRIM47-206ENST00000592942 CTC1Q2NKJ3 1217 aa16.71■□□□□ 0.27
TRIM47-206ENST00000592942 KMT5BQ4FZB7 885 aa16.71■□□□□ 0.27
TRIM47-206ENST00000592942 TIGD5Q53EQ6 642 aa16.71■□□□□ 0.27
TRIM47-206ENST00000592942 SLFN12LQ6IEE8 588 aa16.71■□□□□ 0.27
TRIM47-206ENST00000592942 PDE12Q6L8Q7 609 aaKnown RBP16.71■□□□□ 0.27
TRIM47-206ENST00000592942 VPS52Q8N1B4 723 aa16.71■□□□□ 0.27
TRIM47-206ENST00000592942 TMEM130Q8N3G9 435 aa16.71■□□□□ 0.27
TRIM47-206ENST00000592942 MRPL43Q8N983 215 aaKnown RBP16.71■□□□□ 0.27
TRIM47-206ENST00000592942 TMEM87AQ8NBN3 555 aa16.71■□□□□ 0.27
TRIM47-206ENST00000592942 SCFD1Q8WVM8 642 aa16.71■□□□□ 0.27
TRIM47-206ENST00000592942 TMEM169Q96HH4 297 aa16.71■□□□□ 0.27
TRIM47-206ENST00000592942 MSTO1Q9BUK6 570 aa16.71■□□□□ 0.27
TRIM47-206ENST00000592942 ZBP1Q9H171 429 aa16.71■□□□□ 0.27
TRIM47-206ENST00000592942 SLC39A2Q9NP94 309 aa16.71■□□□□ 0.27
TRIM47-206ENST00000592942 LACTBL1A8MY62 500 aa16.7■□□□□ 0.26
TRIM47-206ENST00000592942 EIF3DO15371 548 aaKnown RBP eCLIP16.7■□□□□ 0.26
TRIM47-206ENST00000592942 TGFB1I1O43294 461 aa16.7■□□□□ 0.26
TRIM47-206ENST00000592942 LILRB3O75022 631 aa16.7■□□□□ 0.26
TRIM47-206ENST00000592942 MYL1P05976 194 aa16.7■□□□□ 0.26
TRIM47-206ENST00000592942 CXCL8P10145 99 aa16.7■□□□□ 0.26
TRIM47-206ENST00000592942 LTBRP36941 435 aa16.7■□□□□ 0.26
TRIM47-206ENST00000592942 MATR3P43243 847 aaKnown RBP eCLIP16.7■□□□□ 0.26
TRIM47-206ENST00000592942 MICAL1Q8TDZ2 1067 aa16.7■□□□□ 0.26
TRIM47-206ENST00000592942 TCF25Q9BQ70 676 aa16.7■□□□□ 0.26
TRIM47-206ENST00000592942 COLEC11Q9BWP8 271 aa16.7■□□□□ 0.26
TRIM47-206ENST00000592942 GPR62Q9BZJ7 368 aa16.7■□□□□ 0.26
TRIM47-206ENST00000592942 TMEM206Q9H813 350 aa16.7■□□□□ 0.26
TRIM47-206ENST00000592942 PLEKHA5Q9HAU0 1116 aa16.7■□□□□ 0.26
TRIM47-206ENST00000592942 NGRNQ9NPE2 291 aaKnown RBP16.7■□□□□ 0.26
TRIM47-206ENST00000592942 TOPORSQ9NS56 1045 aaPredicted RBP16.7■□□□□ 0.26
TRIM47-206ENST00000592942 AGO2Q9UKV8 859 aaKnown RBP16.7■□□□□ 0.26
TRIM47-206ENST00000592942 EXOC7Q9UPT5 735 aa16.7■□□□□ 0.26
TRIM47-206ENST00000592942 CITO14578 2027 aa16.69■□□□□ 0.26
TRIM47-206ENST00000592942 PER2O15055 1255 aa16.69■□□□□ 0.26
TRIM47-206ENST00000592942 CXCL14O95715 111 aa16.69■□□□□ 0.26
TRIM47-206ENST00000592942 CTSAP10619 480 aa16.69■□□□□ 0.26
TRIM47-206ENST00000592942 ACOT2P49753 483 aa16.69■□□□□ 0.26
TRIM47-206ENST00000592942 SPAG1Q07617 926 aa16.69■□□□□ 0.26
TRIM47-206ENST00000592942 KCNC3Q14003 757 aa16.69■□□□□ 0.26
TRIM47-206ENST00000592942 POSTNQ15063 836 aa16.69■□□□□ 0.26
TRIM47-206ENST00000592942 KYAT1Q16773 422 aa16.69■□□□□ 0.26
TRIM47-206ENST00000592942 UPP1Q16831 310 aa16.69■□□□□ 0.26
TRIM47-206ENST00000592942 PLPP4Q5VZY2 271 aa16.69■□□□□ 0.26
TRIM47-206ENST00000592942 TMC7Q7Z402 723 aa16.69■□□□□ 0.26
TRIM47-206ENST00000592942 KIAA0895Q8NCT3 520 aa16.69■□□□□ 0.26
TRIM47-206ENST00000592942 AUTS2Q8WXX7 1259 aa16.69■□□□□ 0.26
TRIM47-206ENST00000592942 C18orf25Q96B23 403 aaPredicted RBP16.69■□□□□ 0.26
TRIM47-206ENST00000592942 CBWD1Q9BRT8 395 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms