RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 RUFY4Q6ZNE9 571 aa17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 SRLQ86TD4 932 aa17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 JAMLQ86YT9 394 aa17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 EFCAB13Q8IY85 973 aa17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 DEPTORQ8TB45 409 aa17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 SSC5DA1L4H1 1573 aa17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 WDR90Q96KV7 1748 aa17.77■□□□□ 0.44
PRKCSH-217ENST00000592741 ATG7O95352 703 aa17.77■□□□□ 0.44
PRKCSH-217ENST00000592741 CLDN10P78369 228 aa17.77■□□□□ 0.44
PRKCSH-217ENST00000592741 DHX9Q08211 1270 aaKnown RBP17.77■□□□□ 0.44
PRKCSH-217ENST00000592741 SH3D19Q5HYK7 790 aa17.77■□□□□ 0.44
PRKCSH-217ENST00000592741 ANKRD35Q8N283 1001 aa17.77■□□□□ 0.44
PRKCSH-217ENST00000592741 PSPC1Q8WXF1 523 aaKnown RBP17.77■□□□□ 0.44
PRKCSH-217ENST00000592741 KCNN1Q92952 543 aa17.77■□□□□ 0.44
PRKCSH-217ENST00000592741 TMEM143Q96AN5 459 aa17.77■□□□□ 0.44
PRKCSH-217ENST00000592741 CNOT8Q9UFF9 292 aaKnown RBP17.77■□□□□ 0.44
PRKCSH-217ENST00000592741 AGO2Q9UKV8 859 aaKnown RBP17.77■□□□□ 0.44
PRKCSH-217ENST00000592741 RRP15Q9Y3B9 282 aaKnown RBP17.77■□□□□ 0.44
PRKCSH-217ENST00000592741 CD2APQ9Y5K6 639 aa17.77■□□□□ 0.44
PRKCSH-217ENST00000592741 ZNFX1Q9P2E3 1918 aaKnown RBP17.77■□□□□ 0.43
PRKCSH-217ENST00000592741 TNNI1P19237 187 aa17.77■□□□□ 0.43
PRKCSH-217ENST00000592741 NAMPTP43490 491 aa17.77■□□□□ 0.43
PRKCSH-217ENST00000592741 ZNF844Q08AG5 666 aa17.77■□□□□ 0.43
PRKCSH-217ENST00000592741 PDCLQ13371 301 aa17.77■□□□□ 0.43
PRKCSH-217ENST00000592741 SPDYCQ5MJ68 293 aa17.77■□□□□ 0.43
PRKCSH-217ENST00000592741 TTC19Q6DKK2 380 aaPredicted RBP17.77■□□□□ 0.43
PRKCSH-217ENST00000592741 ZNF677Q86XU0 584 aa17.77■□□□□ 0.43
PRKCSH-217ENST00000592741 PRELID2Q8N945 189 aa17.77■□□□□ 0.43
PRKCSH-217ENST00000592741 ASAP3Q8TDY4 903 aa17.77■□□□□ 0.43
PRKCSH-217ENST00000592741 ZNF516Q92618 1163 aa17.77■□□□□ 0.43
PRKCSH-217ENST00000592741 GLG1Q92896 1179 aa17.77■□□□□ 0.43
PRKCSH-217ENST00000592741 MAGOHBQ96A72 148 aaKnown RBP17.77■□□□□ 0.43
PRKCSH-217ENST00000592741 ELMO3Q96BJ8 720 aa17.77■□□□□ 0.43
PRKCSH-217ENST00000592741 BTBD6Q96KE9 485 aa17.77■□□□□ 0.43
PRKCSH-217ENST00000592741 RUNDC3BQ96NL0 473 aa17.77■□□□□ 0.43
PRKCSH-217ENST00000592741 PORCNQ9H237 461 aa17.77■□□□□ 0.43
PRKCSH-217ENST00000592741 MTUS1Q9ULD2 1270 aa17.77■□□□□ 0.43
PRKCSH-217ENST00000592741 PCDHA3Q9Y5H8 950 aa17.77■□□□□ 0.43
PRKCSH-217ENST00000592741 STYXL1Q9Y6J8 313 aa17.77■□□□□ 0.43
PRKCSH-217ENST00000592741 TULP2O00295 520 aa17.76■□□□□ 0.43
PRKCSH-217ENST00000592741 GRIN3BO60391 1043 aa17.76■□□□□ 0.43
PRKCSH-217ENST00000592741 ATP4AP20648 1035 aa17.76■□□□□ 0.43
PRKCSH-217ENST00000592741 GBP1P32455 592 aa17.76■□□□□ 0.43
PRKCSH-217ENST00000592741 PIK3CAP42336 1068 aa17.76■□□□□ 0.43
PRKCSH-217ENST00000592741 DRG2P55039 364 aaKnown RBP17.76■□□□□ 0.43
PRKCSH-217ENST00000592741 BPIFB4P59827 614 aa17.76■□□□□ 0.43
PRKCSH-217ENST00000592741 BIRC3Q13489 604 aa17.76■□□□□ 0.43
PRKCSH-217ENST00000592741 SLFN12LQ6IEE8 588 aa17.76■□□□□ 0.43
PRKCSH-217ENST00000592741 SEPT14Q6ZU15 432 aa17.76■□□□□ 0.43
PRKCSH-217ENST00000592741 OR2W6PQ8NHA6 318 aa17.76■□□□□ 0.43
PRKCSH-217ENST00000592741 BCAS4Q8TDM0 211 aa17.76■□□□□ 0.43
PRKCSH-217ENST00000592741 C18orf8Q96DM3 657 aa17.76■□□□□ 0.43
PRKCSH-217ENST00000592741 CENPHQ9H3R5 247 aa17.76■□□□□ 0.43
PRKCSH-217ENST00000592741 DHX33Q9H6R0 707 aaKnown RBP17.76■□□□□ 0.43
PRKCSH-217ENST00000592741 GPRC5DQ9NZD1 345 aa17.76■□□□□ 0.43
PRKCSH-217ENST00000592741 PCYOX1Q9UHG3 505 aa17.76■□□□□ 0.43
PRKCSH-217ENST00000592741 SIP14410 1827 aa17.76■□□□□ 0.43
PRKCSH-217ENST00000592741 LRRIQ4A6NIV6 560 aa17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 PODXLO00592 558 aa17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 PPFIA2O75334 1257 aa17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 PIGRP01833 764 aa17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 HLA-DRAP01903 254 aa17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 PYGMP11217 842 aa17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 GLRA2P23416 452 aa17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 PTGIRP43119 386 aa17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 RWDD2BP57060 319 aa17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 NLRP11P59045 1033 aaKnown RBP17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 KCTD19Q17RG1 926 aaPredicted RBP17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 ZACNQ401N2 412 aa17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 LMBRD2Q68DH5 695 aaPredicted RBP17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 SLC13A5Q86YT5 568 aaPredicted RBP17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 ARFGAP2Q8N6H7 521 aa17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.75■□□□□ 0.435e-12■■□□□ 12.7
PRKCSH-217ENST00000592741 SLC7A3Q8WY07 619 aa17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 TRIM11Q96F44 468 aa17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 LDHAP00338 332 aaKnown RBP17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 ARL2P36404 184 aa17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 ALDH5A1P51649 535 aaPredicted RBP17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 CNTN2Q02246 1040 aa17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 PRKG1Q13976 671 aa17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 AGBL2Q5U5Z8 902 aa17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 ZNF526Q8TF50 670 aaPredicted RBP17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 PLVAPQ9BX97 442 aa17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 NIFKQ9BYG3 293 aaKnown RBP17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 ZDHHC18Q9NUE0 388 aa17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 FBXO40Q9UH90 709 aa17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 PCDHB2Q9Y5E7 798 aa17.75■□□□□ 0.43
PRKCSH-217ENST00000592741 K7ERI5 159 aa17.74■□□□□ 0.43
PRKCSH-217ENST00000592741 C4BPAP04003 597 aaKnown RBP17.74■□□□□ 0.43
PRKCSH-217ENST00000592741 MYBL1P10243 752 aa17.74■□□□□ 0.43
PRKCSH-217ENST00000592741 UNGP13051 313 aaPredicted RBP17.74■□□□□ 0.43
PRKCSH-217ENST00000592741 RFC5P40937 340 aa17.74■□□□□ 0.43
PRKCSH-217ENST00000592741 ACOT2P49753 483 aa17.74■□□□□ 0.43
PRKCSH-217ENST00000592741 CYP1B1Q16678 543 aa17.74■□□□□ 0.43
PRKCSH-217ENST00000592741 TDRD10Q5VZ19 366 aaKnown RBP17.74■□□□□ 0.43
PRKCSH-217ENST00000592741 CCDC137Q6PK04 289 aaKnown RBP17.74■□□□□ 0.43
PRKCSH-217ENST00000592741 FAM84AQ96KN4 292 aa17.74■□□□□ 0.43
PRKCSH-217ENST00000592741 TXLNGYQ9BZA5 131 aa17.74■□□□□ 0.43
PRKCSH-217ENST00000592741 AVENQ9NQS1 362 aaPredicted RBP17.74■□□□□ 0.43
PRKCSH-217ENST00000592741 RBAKQ9NYW8 714 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms