RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 FEZF2Q8TBJ5 459 aa20.75■□□□□ 0.91
CCDC43-205ENST00000592333 SNX29Q8TEQ0 813 aa20.75■□□□□ 0.91
CCDC43-205ENST00000592333 RTP3Q9BQQ7 232 aa20.75■□□□□ 0.91
CCDC43-205ENST00000592333 PAAF1Q9BRP4 392 aa20.75■□□□□ 0.91
CCDC43-205ENST00000592333 TOPORSQ9NS56 1045 aaPredicted RBP20.75■□□□□ 0.91
CCDC43-205ENST00000592333 CASTOR2A6NHX0 329 aa20.74■□□□□ 0.91
CCDC43-205ENST00000592333 TRAPPC3O43617 180 aa20.74■□□□□ 0.91
CCDC43-205ENST00000592333 N4BP1O75113 896 aaKnown RBP20.74■□□□□ 0.91
CCDC43-205ENST00000592333 C1QBPQ07021 282 aaKnown RBP20.74■□□□□ 0.91
CCDC43-205ENST00000592333 RABEP1Q15276 862 aa20.74■□□□□ 0.91
CCDC43-205ENST00000592333 PSMD5Q16401 504 aa20.74■□□□□ 0.91
CCDC43-205ENST00000592333 XKR4Q5GH76 650 aa20.74■□□□□ 0.91
CCDC43-205ENST00000592333 EEF1DP3Q658K8 133 aa20.74■□□□□ 0.91
CCDC43-205ENST00000592333 DTHD1Q6ZMT9 781 aa20.74■□□□□ 0.91
CCDC43-205ENST00000592333 ATOH1Q92858 354 aaPredicted RBP20.74■□□□□ 0.91
CCDC43-205ENST00000592333 B3GALT6Q96L58 329 aa20.74■□□□□ 0.91
CCDC43-205ENST00000592333 PPP1R10Q96QC0 940 aaKnown RBP20.74■□□□□ 0.91
CCDC43-205ENST00000592333 CLSTN3Q9BQT9 956 aa20.74■□□□□ 0.91
CCDC43-205ENST00000592333 NTPCRQ9BSD7 190 aaKnown RBP20.74■□□□□ 0.91
CCDC43-205ENST00000592333 SMOC2Q9H3U7 446 aa20.74■□□□□ 0.91
CCDC43-205ENST00000592333 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.74■□□□□ 0.91
CCDC43-205ENST00000592333 PCDHB6Q9Y5E3 794 aa20.74■□□□□ 0.91
CCDC43-205ENST00000592333 ST18O60284 1047 aa20.73■□□□□ 0.91
CCDC43-205ENST00000592333 SPATA31D3P0C874 917 aa20.73■□□□□ 0.91
CCDC43-205ENST00000592333 LAMP2P13473 410 aa20.73■□□□□ 0.91
CCDC43-205ENST00000592333 AOC1P19801 751 aa20.73■□□□□ 0.91
CCDC43-205ENST00000592333 FGFR3P22607 806 aa20.73■□□□□ 0.91
CCDC43-205ENST00000592333 GRM5P41594 1212 aa20.73■□□□□ 0.91
CCDC43-205ENST00000592333 YARSP54577 528 aaKnown RBP20.73■□□□□ 0.91
CCDC43-205ENST00000592333 DMP1Q13316 513 aaPredicted RBP20.73■□□□□ 0.91
CCDC43-205ENST00000592333 C8orf34Q49A92 452 aa20.73■□□□□ 0.91
CCDC43-205ENST00000592333 NT5DC1Q5TFE4 455 aa20.73■□□□□ 0.91
CCDC43-205ENST00000592333 LIN9Q5TKA1 542 aa20.73■□□□□ 0.91
CCDC43-205ENST00000592333 SPATA31D4Q6ZUB0 917 aa20.73■□□□□ 0.91
CCDC43-205ENST00000592333 DDX27Q96GQ7 796 aaKnown RBP20.73■□□□□ 0.91
CCDC43-205ENST00000592333 CCDC94Q9BW85 323 aaPredicted RBP20.73■□□□□ 0.91
CCDC43-205ENST00000592333 PTPRHQ9HD43 1115 aa20.73■□□□□ 0.91
CCDC43-205ENST00000592333 SLC38A7Q9NVC3 462 aa20.73■□□□□ 0.91
CCDC43-205ENST00000592333 KCND2Q9NZV8 630 aa20.73■□□□□ 0.91
CCDC43-205ENST00000592333 ARHGAP28Q9P2N2 729 aa20.73■□□□□ 0.91
CCDC43-205ENST00000592333 EDN1P05305 212 aa20.72■□□□□ 0.91
CCDC43-205ENST00000592333 RPL17P18621 184 aaKnown RBP20.72■□□□□ 0.91
CCDC43-205ENST00000592333 LIG1P18858 919 aa20.72■□□□□ 0.91
CCDC43-205ENST00000592333 NPTX2P47972 431 aa20.72■□□□□ 0.91
CCDC43-205ENST00000592333 RAB33AQ14088 237 aa20.72■□□□□ 0.91
CCDC43-205ENST00000592333 UPP1Q16831 310 aa20.72■□□□□ 0.91
CCDC43-205ENST00000592333 HYIQ5T013 277 aa20.72■□□□□ 0.91
CCDC43-205ENST00000592333 PRSS55Q6UWB4 352 aaPredicted RBP20.72■□□□□ 0.91
CCDC43-205ENST00000592333 ALKAL1Q6UXT8 129 aa20.72■□□□□ 0.91
CCDC43-205ENST00000592333 CEP57Q86XR8 500 aa20.72■□□□□ 0.91
CCDC43-205ENST00000592333 SLC44A3Q8N4M1 653 aa20.72■□□□□ 0.91
CCDC43-205ENST00000592333 RABGGTAQ92696 567 aa20.72■□□□□ 0.91
CCDC43-205ENST00000592333 PHOX2BQ99453 314 aa20.72■□□□□ 0.91
CCDC43-205ENST00000592333 ACO2Q99798 780 aaKnown RBP20.72■□□□□ 0.91
CCDC43-205ENST00000592333 MRPL4Q9BYD3 311 aaKnown RBP20.72■□□□□ 0.91
CCDC43-205ENST00000592333 FBXL21Q9UKT6 434 aa20.72■□□□□ 0.91
CCDC43-205ENST00000592333 GDAQ9Y2T3 454 aa20.72■□□□□ 0.91
CCDC43-205ENST00000592333 BACE2Q9Y5Z0 518 aa20.72■□□□□ 0.91
CCDC43-205ENST00000592333 CCDC169A6NNP5 214 aa20.71■□□□□ 0.91
CCDC43-205ENST00000592333 ANHXE9PGG2 379 aa20.71■□□□□ 0.91
CCDC43-205ENST00000592333 XYLBO75191 536 aa20.71■□□□□ 0.91
CCDC43-205ENST00000592333 SRFP11831 508 aa20.71■□□□□ 0.91
CCDC43-205ENST00000592333 NPR3P17342 541 aa20.71■□□□□ 0.91
CCDC43-205ENST00000592333 GUCY2CP25092 1073 aa20.71■□□□□ 0.91
CCDC43-205ENST00000592333 PEX3P56589 373 aa20.71■□□□□ 0.91
CCDC43-205ENST00000592333 NBR1Q14596 966 aa20.71■□□□□ 0.91
CCDC43-205ENST00000592333 RINT1Q6NUQ1 792 aa20.71■□□□□ 0.91
CCDC43-205ENST00000592333 ANKS3Q6ZW76 656 aa20.71■□□□□ 0.91
CCDC43-205ENST00000592333 C1orf186Q6ZWK4 172 aa20.71■□□□□ 0.91
CCDC43-205ENST00000592333 DAW1Q8N136 415 aa20.71■□□□□ 0.91
CCDC43-205ENST00000592333 MYADMQ96S97 322 aa20.71■□□□□ 0.91
CCDC43-205ENST00000592333 KIFC3Q9BVG8 833 aa20.71■□□□□ 0.91
CCDC43-205ENST00000592333 KMT5AQ9NQR1 393 aa20.71■□□□□ 0.91
CCDC43-205ENST00000592333 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.71■□□□□ 0.91
CCDC43-205ENST00000592333 SMIM28A0A1B0GU29 152 aa20.7■□□□□ 0.9
CCDC43-205ENST00000592333 E9PMD0 336 aa20.7■□□□□ 0.9
CCDC43-205ENST00000592333 H0Y858 1186 aa20.7■□□□□ 0.9
CCDC43-205ENST00000592333 SLC26A4O43511 780 aa20.7■□□□□ 0.9
CCDC43-205ENST00000592333 HIP1RO75146 1068 aa20.7■□□□□ 0.9
CCDC43-205ENST00000592333 B3GAT3O94766 335 aa20.7■□□□□ 0.9
CCDC43-205ENST00000592333 MCF2P10911 925 aa20.7■□□□□ 0.9
CCDC43-205ENST00000592333 SCP2P22307 547 aa20.7■□□□□ 0.9
CCDC43-205ENST00000592333 NBL1P41271 181 aa20.7■□□□□ 0.9
CCDC43-205ENST00000592333 PPM1LQ5SGD2 360 aa20.7■□□□□ 0.9
CCDC43-205ENST00000592333 ARL6IP4Q66PJ3 421 aaKnown RBP20.7■□□□□ 0.9
CCDC43-205ENST00000592333 CWF19L1Q69YN2 538 aaKnown RBP20.7■□□□□ 0.9
CCDC43-205ENST00000592333 GLYCTKQ8IVS8 523 aa20.7■□□□□ 0.9
CCDC43-205ENST00000592333 HASPINQ8TF76 798 aa20.7■□□□□ 0.9
CCDC43-205ENST00000592333 SPIRE2Q8WWL2 714 aa20.7■□□□□ 0.9
CCDC43-205ENST00000592333 KCNN1Q92952 543 aa20.7■□□□□ 0.9
CCDC43-205ENST00000592333 MTRRQ9UBK8 725 aa20.7■□□□□ 0.9
CCDC43-205ENST00000592333 CACNG4Q9UBN1 327 aa20.7■□□□□ 0.9
CCDC43-205ENST00000592333 CENPBP07199 599 aaPredicted RBP20.69■□□□□ 0.9
CCDC43-205ENST00000592333 C8AP07357 584 aa20.69■□□□□ 0.9
CCDC43-205ENST00000592333 KCNE1P15382 129 aa20.69■□□□□ 0.9
CCDC43-205ENST00000592333 PROZP22891 400 aa20.69■□□□□ 0.9
CCDC43-205ENST00000592333 FSHRP23945 695 aa20.69■□□□□ 0.9
CCDC43-205ENST00000592333 RPL9P32969 192 aaKnown RBP20.69■□□□□ 0.9
CCDC43-205ENST00000592333 CLCNKBP51801 687 aa20.69■□□□□ 0.9
CCDC43-205ENST00000592333 ATP2C1P98194 919 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 229 ms