RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 IDEP14735 1019 aa15.26■□□□□ 0.03
CLIP3-205ENST00000592017 MATR3P43243 847 aaKnown RBP eCLIP15.26■□□□□ 0.03
CLIP3-205ENST00000592017 ZNF131P52739 623 aa15.26■□□□□ 0.03
CLIP3-205ENST00000592017 OSTNP61366 133 aa15.26■□□□□ 0.03
CLIP3-205ENST00000592017 CBX2Q14781 532 aaPredicted RBP15.26■□□□□ 0.03
CLIP3-205ENST00000592017 HAUS6Q7Z4H7 955 aa15.26■□□□□ 0.03
CLIP3-205ENST00000592017 SFR1Q86XK3 245 aa15.26■□□□□ 0.03
CLIP3-205ENST00000592017 CEP120Q8N960 986 aa15.26■□□□□ 0.03
CLIP3-205ENST00000592017 FEZF2Q8TBJ5 459 aa15.26■□□□□ 0.03
CLIP3-205ENST00000592017 RABGGTAQ92696 567 aa15.26■□□□□ 0.03
CLIP3-205ENST00000592017 STAMQ92783 540 aa15.26■□□□□ 0.03
CLIP3-205ENST00000592017 RPGRIP1Q96KN7 1286 aa15.26■□□□□ 0.03
CLIP3-205ENST00000592017 KLHL5Q96PQ7 755 aa15.26■□□□□ 0.03
CLIP3-205ENST00000592017 NTPCRQ9BSD7 190 aaKnown RBP15.26■□□□□ 0.03
CLIP3-205ENST00000592017 ADAM7Q9H2U9 754 aa15.26■□□□□ 0.03
CLIP3-205ENST00000592017 FAM13BQ9NYF5 915 aa15.26■□□□□ 0.03
CLIP3-205ENST00000592017 TRIOO75962 3097 aa15.25■□□□□ 0.03
CLIP3-205ENST00000592017 SOD2P04179 222 aa15.25■□□□□ 0.03
CLIP3-205ENST00000592017 CNPP09543 421 aaKnown RBP15.25■□□□□ 0.03
CLIP3-205ENST00000592017 NMT1P30419 496 aaKnown RBP15.25■□□□□ 0.03
CLIP3-205ENST00000592017 GRIK3Q13003 919 aa15.25■□□□□ 0.03
CLIP3-205ENST00000592017 TPRNQ4KMQ1 711 aa15.25■□□□□ 0.03
CLIP3-205ENST00000592017 HERC4Q5GLZ8 1057 aaPredicted RBP15.25■□□□□ 0.03
CLIP3-205ENST00000592017 AXDND1Q5T1B0 1012 aaPredicted RBP15.25■□□□□ 0.03
CLIP3-205ENST00000592017 MPZL3Q6UWV2 235 aa15.25■□□□□ 0.03
CLIP3-205ENST00000592017 RNF168Q8IYW5 571 aaPredicted RBP15.25■□□□□ 0.03
CLIP3-205ENST00000592017 TMEM87AQ8NBN3 555 aa15.25■□□□□ 0.03
CLIP3-205ENST00000592017 SPATA32Q96LK8 384 aa15.25■□□□□ 0.03
CLIP3-205ENST00000592017 CACNG4Q9UBN1 327 aa15.25■□□□□ 0.03
CLIP3-205ENST00000592017 STK39Q9UEW8 545 aa15.25■□□□□ 0.03
CLIP3-205ENST00000592017 ATP6V1DQ9Y5K8 247 aa15.25■□□□□ 0.03
CLIP3-205ENST00000592017 C2CD2LO14523 706 aa15.24■□□□□ 0.03
CLIP3-205ENST00000592017 HNRNPDLO14979 420 aaKnown RBP15.24■□□□□ 0.03
CLIP3-205ENST00000592017 NR1I2O75469 434 aa15.24■□□□□ 0.03
CLIP3-205ENST00000592017 WEE2P0C1S8 567 aa15.24■□□□□ 0.03
CLIP3-205ENST00000592017 MCF2P10911 925 aa15.24■□□□□ 0.03
CLIP3-205ENST00000592017 LIG4P49917 911 aa15.24■□□□□ 0.03
CLIP3-205ENST00000592017 YARSP54577 528 aaKnown RBP15.24■□□□□ 0.03
CLIP3-205ENST00000592017 NOLC1Q14978 699 aaKnown RBP eCLIP15.24■□□□□ 0.03
CLIP3-205ENST00000592017 GLRA4Q5JXX5 417 aa15.24■□□□□ 0.03
CLIP3-205ENST00000592017 KIAA0319Q5VV43 1072 aa15.24■□□□□ 0.03
CLIP3-205ENST00000592017 LEO1Q8WVC0 666 aaPredicted RBP15.24■□□□□ 0.03
CLIP3-205ENST00000592017 ZBTB45Q96K62 511 aaPredicted RBP15.24■□□□□ 0.03
CLIP3-205ENST00000592017 HERC2P3Q9BVR0 1158 aa15.24■□□□□ 0.03
CLIP3-205ENST00000592017 CCDC94Q9BW85 323 aaPredicted RBP15.24■□□□□ 0.03
CLIP3-205ENST00000592017 COLEC11Q9BWP8 271 aa15.24■□□□□ 0.03
CLIP3-205ENST00000592017 PTPRHQ9HD43 1115 aa15.24■□□□□ 0.03
CLIP3-205ENST00000592017 MRPL17Q9NRX2 175 aaKnown RBP15.24■□□□□ 0.03
CLIP3-205ENST00000592017 TBC1D7Q9P0N9 293 aa15.24■□□□□ 0.03
CLIP3-205ENST00000592017 RCOR1Q9UKL0 485 aa15.24■□□□□ 0.03
CLIP3-205ENST00000592017 TBX20Q9UMR3 447 aa15.24■□□□□ 0.03
CLIP3-205ENST00000592017 ZMYM2Q9UBW7 1377 aa15.24■□□□□ 0.03
CLIP3-205ENST00000592017 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.23■□□□□ 0.03
CLIP3-205ENST00000592017 CASTOR2A6NHX0 329 aa15.23■□□□□ 0.03
CLIP3-205ENST00000592017 PTGESO14684 152 aa15.23■□□□□ 0.03
CLIP3-205ENST00000592017 POLR2DO15514 142 aaKnown RBP15.23■□□□□ 0.03
CLIP3-205ENST00000592017 TOM1L1O75674 476 aa15.23■□□□□ 0.03
CLIP3-205ENST00000592017 PROZP22891 400 aa15.23■□□□□ 0.03
CLIP3-205ENST00000592017 GRM5P41594 1212 aa15.23■□□□□ 0.03
CLIP3-205ENST00000592017 E2F4Q16254 413 aa15.23■□□□□ 0.03
CLIP3-205ENST00000592017 RARS2Q5T160 578 aaKnown RBP15.23■□□□□ 0.03
CLIP3-205ENST00000592017 RESP18Q5W5W9 173 aa15.23■□□□□ 0.03
CLIP3-205ENST00000592017 ZPBP2Q6X784 338 aa15.23■□□□□ 0.03
CLIP3-205ENST00000592017 IQUBQ8NA54 791 aa15.23■□□□□ 0.03
CLIP3-205ENST00000592017 DNAJC19Q96DA6 116 aa15.23■□□□□ 0.03
CLIP3-205ENST00000592017 B3GALT6Q96L58 329 aa15.23■□□□□ 0.03
CLIP3-205ENST00000592017 FIZ1Q96SL8 496 aa15.23■□□□□ 0.03
CLIP3-205ENST00000592017 PAAF1Q9BRP4 392 aa15.23■□□□□ 0.03
CLIP3-205ENST00000592017 EMILIN2Q9BXX0 1053 aa15.23■□□□□ 0.03
CLIP3-205ENST00000592017 GPR62Q9BZJ7 368 aa15.23■□□□□ 0.03
CLIP3-205ENST00000592017 TNMDQ9H2S6 317 aa15.23■□□□□ 0.03
CLIP3-205ENST00000592017 MRPL44Q9H9J2 332 aaKnown RBP15.23■□□□□ 0.03
CLIP3-205ENST00000592017 RXFP1Q9HBX9 757 aa15.23■□□□□ 0.03
CLIP3-205ENST00000592017 CHST7Q9NS84 486 aa15.23■□□□□ 0.03
CLIP3-205ENST00000592017 DZANK1Q9NVP4 752 aa15.23■□□□□ 0.03
CLIP3-205ENST00000592017 PRR33A8MZF0 331 aa15.22■□□□□ 0.03
CLIP3-205ENST00000592017 ABLIM1O14639 778 aa15.22■□□□□ 0.03
CLIP3-205ENST00000592017 TEX28O15482 410 aa15.22■□□□□ 0.03
CLIP3-205ENST00000592017 CLDN3O15551 220 aa15.22■□□□□ 0.03
CLIP3-205ENST00000592017 URODP06132 367 aa15.22■□□□□ 0.03
CLIP3-205ENST00000592017 THP07101 528 aa15.22■□□□□ 0.03
CLIP3-205ENST00000592017 GAP43P17677 238 aa15.22■□□□□ 0.03
CLIP3-205ENST00000592017 KLRC2P26717 231 aa15.22■□□□□ 0.03
CLIP3-205ENST00000592017 CLCN4P51793 760 aa15.22■□□□□ 0.03
CLIP3-205ENST00000592017 DSG1Q02413 1049 aa15.22■□□□□ 0.03
CLIP3-205ENST00000592017 ITIH3Q06033 890 aa15.22■□□□□ 0.03
CLIP3-205ENST00000592017 NAB2Q15742 525 aa15.22■□□□□ 0.03
CLIP3-205ENST00000592017 SEZ6Q53EL9 994 aa15.22■□□□□ 0.03
CLIP3-205ENST00000592017 ZC2HC1CQ53FD0 456 aaPredicted RBP15.22■□□□□ 0.03
CLIP3-205ENST00000592017 CES5AQ6NT32 575 aa15.22■□□□□ 0.03
CLIP3-205ENST00000592017 PPFIBP1Q86W92 1011 aa15.22■□□□□ 0.03
CLIP3-205ENST00000592017 FBXL18Q96ME1 805 aa15.22■□□□□ 0.03
CLIP3-205ENST00000592017 CUEDC2Q9H467 287 aa15.22■□□□□ 0.03
CLIP3-205ENST00000592017 POMKQ9H5K3 350 aa15.22■□□□□ 0.03
CLIP3-205ENST00000592017 TOPORSQ9NS56 1045 aaPredicted RBP15.22■□□□□ 0.03
CLIP3-205ENST00000592017 PANK4Q9NVE7 773 aa15.22■□□□□ 0.03
CLIP3-205ENST00000592017 SEL1LQ9UBV2 794 aa15.22■□□□□ 0.03
CLIP3-205ENST00000592017 GCNT3O95395 438 aa15.21■□□□□ 0.03
CLIP3-205ENST00000592017 SCP2P22307 547 aa15.21■□□□□ 0.03
CLIP3-205ENST00000592017 SP100P23497 879 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms