RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 ANKS1AQ92625 1134 aa13.02□□□□□ -0.33
SMARCA4-217ENST00000591595 GJA10Q969M2 543 aa13.02□□□□□ -0.33
SMARCA4-217ENST00000591595 ASCC2Q9H1I8 757 aaPredicted RBP13.02□□□□□ -0.33
SMARCA4-217ENST00000591595 INTS9Q9NV88 658 aaKnown RBP13.02□□□□□ -0.33
SMARCA4-217ENST00000591595 ADAMTS1Q9UHI8 967 aa13.02□□□□□ -0.33
SMARCA4-217ENST00000591595 USP17L5A8MUK1 530 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 SLC37A4O43826 429 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 AFPP02771 609 aaKnown RBP13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 TKTP29401 623 aaKnown RBP13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 HNRNPH3P31942 346 aaKnown RBP13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 BTDP43251 543 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 ACADVLP49748 655 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 PATL1Q86TB9 770 aaKnown RBP13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 AGGF1Q8N302 714 aaeCLIP13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 SH3TC2Q8TF17 1288 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 NUDT12Q9BQG2 462 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 TIMMDC1Q9NPL8 285 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 TXLNGQ9NUQ3 528 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 ATP6V0A2Q9Y487 856 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 TRIM17Q9Y577 477 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 GPC6Q9Y625 555 aaPredicted RBP13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 PASKQ96RG2 1323 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 CCDC162PA2VCL2 907 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 SLC26A4O43511 780 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 IFNAR2P48551 515 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 ADCY7P51828 1080 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 FKBP3Q00688 224 aaKnown RBP13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 ARHGEF6Q15052 776 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 FAM83BQ5T0W9 1011 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 KLHDC7AQ5VTJ3 777 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 LRRC47Q8N1G4 583 aaKnown RBP13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 GFM2Q969S9 779 aaKnown RBP13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 TLCD1Q96CP7 247 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 DHX36Q9H2U1 1008 aaKnown RBP13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 GINM1Q9NU53 330 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 DDX18Q9NVP1 670 aaKnown RBP13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 COL4A3BPQ9Y5P4 624 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 O00370 1275 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 ADCY3O60266 1144 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 CYP2C9P11712 490 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 KLHL30Q0D2K2 578 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 SPIDRQ14159 915 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 FAM26FQ5R3K3 315 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 UBE2Q1Q7Z7E8 422 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 MYO1HQ8N1T3 1032 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 LINC00116Q8NCU8 138 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 FBXO41Q8TF61 875 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 PNMA5Q96PV4 448 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 HEPHQ9BQS7 1158 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 LRRC27Q9C0I9 530 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 PSTPIP2Q9H939 334 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 GIT1Q9Y2X7 761 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 COL4A1P02462 1669 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 MYH1P12882 1939 aa13.01□□□□□ -0.33
SMARCA4-217ENST00000591595 MYH10P35580 1976 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 MTRF1O75570 445 aaKnown RBP13□□□□□ -0.33
SMARCA4-217ENST00000591595 METTL21CQ5VZV1 264 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 SLC51AQ86UW1 340 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13□□□□□ -0.332e-6■■□□□ 12.8
SMARCA4-217ENST00000591595 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13□□□□□ -0.334e-6■■■■■ 29.8
SMARCA4-217ENST00000591595 BAP1Q92560 729 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 RAD54LQ92698 747 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 USP6NLQ92738 828 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 CDCA7Q9BWT1 371 aaPredicted RBP13□□□□□ -0.33
SMARCA4-217ENST00000591595 STK33Q9BYT3 514 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 LRMDAQ9H2I8 198 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 MTMR3Q13615 1198 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 UBE2SQ16763 222 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 HERC4Q5GLZ8 1057 aaPredicted RBP13□□□□□ -0.33
SMARCA4-217ENST00000591595 LRRC74BQ6ZQY2 392 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 HS2ST1Q7LGA3 356 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 KCNK18Q7Z418 384 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 NRG4Q8WWG1 115 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 PPP1R10Q96QC0 940 aaKnown RBP13□□□□□ -0.33
SMARCA4-217ENST00000591595 ZNF184Q99676 751 aaPredicted RBP13□□□□□ -0.33
SMARCA4-217ENST00000591595 CEP44Q9C0F1 390 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 RIC8AQ9NPQ8 531 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 MTUS1Q9ULD2 1270 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 ARL2BPQ9Y2Y0 163 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 SMIM31A0A1B0GVY4 71 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 TEX28O15482 410 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 CBFA2T3O75081 653 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 TBCAO75347 108 aaKnown RBP13□□□□□ -0.33
SMARCA4-217ENST00000591595 MSL3P1P0C860 447 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 BDNFP23560 247 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 KLRC1P26715 233 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 PICALMQ13492 652 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 DENND2DQ9H6A0 471 aaPredicted RBP13□□□□□ -0.33
SMARCA4-217ENST00000591595 CCDC134Q9H6E4 229 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 METTL5Q9NRN9 209 aaKnown RBP13□□□□□ -0.33
SMARCA4-217ENST00000591595 MRGBPQ9NV56 204 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 STK32BQ9NY57 414 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 FBXL5Q9UKA1 691 aa13□□□□□ -0.33
SMARCA4-217ENST00000591595 HBS1LQ9Y450 684 aaKnown RBP13□□□□□ -0.33
SMARCA4-217ENST00000591595 SSU72P8A0A1W2PR75 194 aa12.99□□□□□ -0.33
SMARCA4-217ENST00000591595 GNPATO15228 680 aa12.99□□□□□ -0.33
SMARCA4-217ENST00000591595 ECE2O60344 883 aa12.99□□□□□ -0.33
SMARCA4-217ENST00000591595 FBXO21O94952 628 aa12.99□□□□□ -0.33
SMARCA4-217ENST00000591595 SERPING1P05155 500 aa12.99□□□□□ -0.33
SMARCA4-217ENST00000591595 ENPP1P22413 925 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms