RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 OCRLQ01968 901 aa14.1□□□□□ -0.15
SMARCA4-216ENST00000591545 DYRK4Q9NR20 520 aa14.1□□□□□ -0.15
SMARCA4-216ENST00000591545 KCND2Q9NZV8 630 aa14.1□□□□□ -0.15
SMARCA4-216ENST00000591545 CFLARO15519 480 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 CD4P01730 458 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 ICAM1P05362 532 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 RPLP2P05387 115 aaKnown RBP14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 SOX5P35711 763 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 DHX34Q14147 1143 aaKnown RBP14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 EMC2Q15006 297 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 FAM83AQ86UY5 434 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 RDM1Q8NG50 284 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 PIP4K2CQ8TBX8 421 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 PRMT7Q9NVM4 692 aaPredicted RBP14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 MEGF6O75095 1541 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 HNRNPCL1O60812 293 aaKnown RBP14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 CHGBP05060 677 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 RFX5P48382 616 aaPredicted RBP14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 RPS6P62753 249 aaKnown RBP14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 PRKCEQ02156 737 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 BFSP2Q13515 415 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 ARID5BQ14865 1188 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 WNT8AQ9H1J5 351 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 A0A0G2JND7 137 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 TRIM72Q6ZMU5 477 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 NLRP14Q86W24 1093 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 CHMP6Q96FZ7 201 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 GOLPH3LQ9H4A5 285 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 JMJD4Q9H9V9 463 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 GNA15P30679 374 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 MAGOHP61326 146 aaKnown RBP14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 ACCSLQ4AC99 568 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 APPL2Q8NEU8 664 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 TTC17Q96AE7 1141 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 OPTNQ96CV9 577 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 KLHL8Q9P2G9 620 aaPredicted RBP14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 PCDHB7Q9Y5E2 793 aa14.09□□□□□ -0.15
SMARCA4-216ENST00000591545 CXCL11O14625 94 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 SUPT20HL2P0C7V6 817 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 GRIK1P39086 918 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 EXOSC10Q01780 885 aaKnown RBP14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 EFHC2Q5JST6 749 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 VIPAS39Q9H9C1 493 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 SENP1Q9P0U3 644 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 AGAP1Q9UPQ3 857 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 FER1L4A9Z1Z3 1794 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 PRRG1O14668 218 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 MCF2P10911 925 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 PRCPP42785 496 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 PSMC1P62191 440 aaKnown RBP14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 CDR2Q01850 454 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 USP50Q70EL3 339 aaPredicted RBP14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 SAMD3Q8N6K7 520 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 DPF3Q92784 378 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 KLRK1P26718 216 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 CDK17Q00537 523 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 TMEM132DQ14C87 1099 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 STILQ15468 1287 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 NBPF12Q5TAG4 269 aaPredicted RBP14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 ZC3H18Q86VM9 953 aaKnown RBP14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 DCP1BQ8IZD4 617 aaKnown RBP14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 IGDCC4Q8TDY8 1250 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 IFT43Q96FT9 208 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 OLFM3Q96PB7 478 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 LRRC37BQ96QE4 947 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 SHPRHQ149N8 1683 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 OCA2Q04671 838 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 PASD1Q8IV76 773 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 COG1Q8WTW3 980 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 C11orf70Q9BRQ4 267 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 SPON2Q9BUD6 331 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 DDX56Q9NY93 547 aaKnown RBP14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 CPA4Q9UI42 421 aa14.08□□□□□ -0.16
SMARCA4-216ENST00000591545 PP2D1A8MPX8 630 aa14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 ZNF609O15014 1411 aa14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 MOCS2O96007 188 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 SNX17Q15036 470 aa14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 EFCAB12Q6NXP0 572 aa14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 KCTD17Q8N5Z5 321 aa14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 PDCD6IPQ8WUM4 868 aaKnown RBP14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 MMTAG2Q9BU76 263 aaKnown RBP14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 TJP2Q9UDY2 1190 aa14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 GAS2O43903 313 aaKnown RBP14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 AP2B1P63010 937 aa14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 KCNB1Q14721 858 aa14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 E2F4Q16254 413 aa14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 BEND6Q5SZJ8 279 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 DPF2Q92785 391 aa14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 FHDC1Q9C0D6 1143 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 INTS2Q9H0H0 1204 aaKnown RBP14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 PPME1Q9Y570 386 aa14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 TMEM62Q0P6H9 643 aa14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 WDR72Q3MJ13 1102 aa14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 CEP19Q96LK0 163 aa14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 POLR3CQ9BUI4 534 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 CCSER1Q9C0I3 900 aa14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 EHD4Q9H223 541 aa14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 EPB41L4AQ9HCS5 686 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 ANLNQ9NQW6 1124 aa14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 PDXKO00764 312 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms