RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 ZNF528Q3MIS6 628 aa17.63■□□□□ 0.41
DDX39A-216ENST00000591275 SLFN12Q8IYM2 578 aa17.63■□□□□ 0.41
DDX39A-216ENST00000591275 ING5Q8WYH8 240 aa17.63■□□□□ 0.41
DDX39A-216ENST00000591275 NFKBIZQ9BYH8 718 aa17.63■□□□□ 0.41
DDX39A-216ENST00000591275 CXCL16Q9H2A7 254 aa17.63■□□□□ 0.41
DDX39A-216ENST00000591275 LTB4R2Q9NPC1 389 aa17.63■□□□□ 0.41
DDX39A-216ENST00000591275 FBXO4Q9UKT5 387 aa17.63■□□□□ 0.41
DDX39A-216ENST00000591275 NOTCH4Q99466 2003 aa17.63■□□□□ 0.41
DDX39A-216ENST00000591275 VWA8A3KMH1 1905 aa17.62■□□□□ 0.41
DDX39A-216ENST00000591275 LRRIQ4A6NIV6 560 aa17.62■□□□□ 0.41
DDX39A-216ENST00000591275 PTGESO14684 152 aa17.62■□□□□ 0.41
DDX39A-216ENST00000591275 SPTLC1O15269 473 aa17.62■□□□□ 0.41
DDX39A-216ENST00000591275 USO1O60763 962 aaKnown RBP17.62■□□□□ 0.41
DDX39A-216ENST00000591275 RARRES1P49788 294 aa17.62■□□□□ 0.41
DDX39A-216ENST00000591275 AXDND1Q5T1B0 1012 aaPredicted RBP17.62■□□□□ 0.41
DDX39A-216ENST00000591275 MAEAQ7L5Y9 396 aa17.62■□□□□ 0.41
DDX39A-216ENST00000591275 PIGOQ8TEQ8 1089 aa17.62■□□□□ 0.41
DDX39A-216ENST00000591275 ATRIPQ8WXE1 791 aa17.62■□□□□ 0.41
DDX39A-216ENST00000591275 CNTNAP3BQ96NU0 1288 aa17.62■□□□□ 0.41
DDX39A-216ENST00000591275 NAP1L4Q99733 375 aaKnown RBP17.62■□□□□ 0.41
DDX39A-216ENST00000591275 HSD17B14Q9BPX1 270 aa17.62■□□□□ 0.41
DDX39A-216ENST00000591275 CNTNAP3Q9BZ76 1288 aa17.62■□□□□ 0.41
DDX39A-216ENST00000591275 GPRC5CQ9NQ84 441 aa17.62■□□□□ 0.41
DDX39A-216ENST00000591275 ANKEF1Q9NU02 776 aa17.62■□□□□ 0.41
DDX39A-216ENST00000591275 ZMYM2Q9UBW7 1377 aa17.62■□□□□ 0.41
DDX39A-216ENST00000591275 TTLL13PA6NNM8 815 aa17.61■□□□□ 0.41
DDX39A-216ENST00000591275 REC8O95072 547 aa17.61■□□□□ 0.41
DDX39A-216ENST00000591275 HOXA9P31269 272 aa17.61■□□□□ 0.41
DDX39A-216ENST00000591275 OR1D2P34982 312 aa17.61■□□□□ 0.41
DDX39A-216ENST00000591275 PFKPQ01813 784 aa17.61■□□□□ 0.41
DDX39A-216ENST00000591275 PABPC1LQ4VXU2 614 aaKnown RBP17.61■□□□□ 0.41
DDX39A-216ENST00000591275 TSSK4Q6SA08 328 aa17.61■□□□□ 0.41
DDX39A-216ENST00000591275 TPRG1Q6ZUI0 275 aa17.61■□□□□ 0.41
DDX39A-216ENST00000591275 NPAS3Q8IXF0 933 aa17.61■□□□□ 0.41
DDX39A-216ENST00000591275 OSBPL6Q9BZF3 934 aa17.61■□□□□ 0.41
DDX39A-216ENST00000591275 SNTG2Q9NY99 539 aa17.61■□□□□ 0.41
DDX39A-216ENST00000591275 DNMT3BQ9UBC3 853 aaKnown RBP17.61■□□□□ 0.41
DDX39A-216ENST00000591275 PCDHA12Q9UN75 941 aa17.61■□□□□ 0.41
DDX39A-216ENST00000591275 PCDHGA2Q9Y5H1 932 aa17.61■□□□□ 0.41
DDX39A-216ENST00000591275 F5P12259 2224 aa17.61■□□□□ 0.41
DDX39A-216ENST00000591275 RECQL4O94761 1208 aa17.6■□□□□ 0.41
DDX39A-216ENST00000591275 LYPLA2O95372 231 aa17.6■□□□□ 0.41
DDX39A-216ENST00000591275 THP07101 528 aa17.6■□□□□ 0.41
DDX39A-216ENST00000591275 XBP1P17861 261 aa17.6■□□□□ 0.41
DDX39A-216ENST00000591275 IGFBP6P24592 240 aaPredicted RBP17.6■□□□□ 0.41
DDX39A-216ENST00000591275 TARSP26639 723 aaKnown RBP17.6■□□□□ 0.41
DDX39A-216ENST00000591275 SCRN1Q12765 414 aa17.6■□□□□ 0.41
DDX39A-216ENST00000591275 NR5A1Q13285 461 aa17.6■□□□□ 0.41
DDX39A-216ENST00000591275 TMEM132AQ24JP5 1023 aa17.6■□□□□ 0.41
DDX39A-216ENST00000591275 ZBTB41Q5SVQ8 909 aa17.6■□□□□ 0.41
DDX39A-216ENST00000591275 PDZD7Q9H5P4 517 aa17.6■□□□□ 0.41
DDX39A-216ENST00000591275 ZSCAN32Q9NX65 697 aa17.6■□□□□ 0.41
DDX39A-216ENST00000591275 SMG5Q9UPR3 1016 aaKnown RBP17.6■□□□□ 0.41
DDX39A-216ENST00000591275 USP20Q9Y2K6 914 aa17.6■□□□□ 0.41
DDX39A-216ENST00000591275 KRT37O76014 449 aa17.59■□□□□ 0.41
DDX39A-216ENST00000591275 CDKL5O76039 1030 aa17.59■□□□□ 0.41
DDX39A-216ENST00000591275 ATXN1P54253 815 aaKnown RBP17.59■□□□□ 0.41
DDX39A-216ENST00000591275 RAB33AQ14088 237 aa17.59■□□□□ 0.41
DDX39A-216ENST00000591275 NAB2Q15742 525 aa17.59■□□□□ 0.41
DDX39A-216ENST00000591275 RSPO2Q6UXX9 243 aaPredicted RBP17.59■□□□□ 0.41
DDX39A-216ENST00000591275 PPP4R3CPQ6ZMV5 832 aa17.59■□□□□ 0.41
DDX39A-216ENST00000591275 NOSTRINQ8IVI9 506 aa17.59■□□□□ 0.41
DDX39A-216ENST00000591275 ZBTB44Q8NCP5 570 aa17.59■□□□□ 0.41
DDX39A-216ENST00000591275 MCRS1Q96EZ8 462 aa17.59■□□□□ 0.41
DDX39A-216ENST00000591275 PLA2G2FQ9BZM2 168 aa17.59■□□□□ 0.41
DDX39A-216ENST00000591275 HEBP1Q9NRV9 189 aa17.59■□□□□ 0.41
DDX39A-216ENST00000591275 PRMT7Q9NVM4 692 aaPredicted RBP17.59■□□□□ 0.41
DDX39A-216ENST00000591275 MRPS23Q9Y3D9 190 aaKnown RBP17.59■□□□□ 0.41
DDX39A-216ENST00000591275 MAP1BP46821 2468 aaKnown RBP17.59■□□□□ 0.41
DDX39A-216ENST00000591275 NEFLP07196 543 aa17.58■□□□□ 0.4
DDX39A-216ENST00000591275 LIG1P18858 919 aa17.58■□□□□ 0.4
DDX39A-216ENST00000591275 TXKP42681 527 aa17.58■□□□□ 0.4
DDX39A-216ENST00000591275 MAGEA9P43362 315 aa17.58■□□□□ 0.4
DDX39A-216ENST00000591275 ELAVL2Q12926 359 aaKnown RBP17.58■□□□□ 0.4
DDX39A-216ENST00000591275 CALCRLQ16602 461 aa17.58■□□□□ 0.4
DDX39A-216ENST00000591275 PDXDC1Q6P996 788 aa17.58■□□□□ 0.4
DDX39A-216ENST00000591275 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.58■□□□□ 0.4
DDX39A-216ENST00000591275 PRIMPOLQ96LW4 560 aa17.58■□□□□ 0.4
DDX39A-216ENST00000591275 FZD8Q9H461 694 aa17.58■□□□□ 0.4
DDX39A-216ENST00000591275 TTC12Q9H892 705 aaPredicted RBP17.58■□□□□ 0.4
DDX39A-216ENST00000591275 PDRG1Q9NUG6 133 aa17.58■□□□□ 0.4
DDX39A-216ENST00000591275 KCNH3Q9ULD8 1083 aa17.58■□□□□ 0.4
DDX39A-216ENST00000591275 USP18Q9UMW8 372 aa17.58■□□□□ 0.4
DDX39A-216ENST00000591275 GDAQ9Y2T3 454 aa17.58■□□□□ 0.4
DDX39A-216ENST00000591275 CDY1Q9Y6F8 540 aa17.58■□□□□ 0.4
DDX39A-216ENST00000591275 STK36Q9NRP7 1315 aa17.57■□□□□ 0.4
DDX39A-216ENST00000591275 N4BP3O15049 544 aa17.57■□□□□ 0.4
DDX39A-216ENST00000591275 POU2F2P09086 479 aa17.57■□□□□ 0.4
DDX39A-216ENST00000591275 PRPF4BQ13523 1007 aaKnown RBP17.57■□□□□ 0.4
DDX39A-216ENST00000591275 SLC5A9Q2M3M2 681 aa17.57■□□□□ 0.4
DDX39A-216ENST00000591275 UVSSAQ2YD98 709 aa17.57■□□□□ 0.4
DDX39A-216ENST00000591275 GLRA4Q5JXX5 417 aa17.57■□□□□ 0.4
DDX39A-216ENST00000591275 CDCA2Q69YH5 1023 aaPredicted RBP17.57■□□□□ 0.4
DDX39A-216ENST00000591275 POTEHQ6S545 545 aa17.57■□□□□ 0.4
DDX39A-216ENST00000591275 ZBTB8OSQ8IWT0 167 aa17.57■□□□□ 0.4
DDX39A-216ENST00000591275 SECISBP2LQ93073 1101 aaKnown RBP17.57■□□□□ 0.4
DDX39A-216ENST00000591275 CLDN23Q96B33 292 aa17.57■□□□□ 0.4
DDX39A-216ENST00000591275 BORCS6Q96GS4 357 aa17.57■□□□□ 0.4
DDX39A-216ENST00000591275 EPC1Q9H2F5 836 aa17.57■□□□□ 0.4
DDX39A-216ENST00000591275 MTRRQ9UBK8 725 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms