RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 ZNF720Q7Z2F6 126 aa24.46■■□□□ 1.51
MBD3-208ENST00000590830 ACAP3Q96P50 834 aa24.46■■□□□ 1.51
MBD3-208ENST00000590830 HERC2P3Q9BVR0 1158 aa24.46■■□□□ 1.51
MBD3-208ENST00000590830 STRA6Q9BX79 667 aa24.46■■□□□ 1.51
MBD3-208ENST00000590830 ST6GALNAC4Q9H4F1 302 aa24.46■■□□□ 1.51
MBD3-208ENST00000590830 CD320Q9NPF0 282 aa24.46■■□□□ 1.51
MBD3-208ENST00000590830 MYH11P35749 1972 aa24.45■■□□□ 1.51
MBD3-208ENST00000590830 CLDN3O15551 220 aa24.45■■□□□ 1.5
MBD3-208ENST00000590830 ME1P48163 572 aa24.45■■□□□ 1.5
MBD3-208ENST00000590830 HSP90AA2PQ14568 343 aaPredicted RBP24.45■■□□□ 1.5
MBD3-208ENST00000590830 BMS1Q14692 1282 aaKnown RBP24.45■■□□□ 1.5
MBD3-208ENST00000590830 NOLC1Q14978 699 aaKnown RBP eCLIP24.45■■□□□ 1.5
MBD3-208ENST00000590830 SLC10A6Q3KNW5 377 aa24.45■■□□□ 1.5
MBD3-208ENST00000590830 KIAA0319Q5VV43 1072 aa24.45■■□□□ 1.5
MBD3-208ENST00000590830 SLC22A17Q8WUG5 538 aa24.45■■□□□ 1.5
MBD3-208ENST00000590830 B3GALT6Q96L58 329 aa24.45■■□□□ 1.5
MBD3-208ENST00000590830 SNX27Q96L92 541 aa24.45■■□□□ 1.5
MBD3-208ENST00000590830 KLHL5Q96PQ7 755 aa24.45■■□□□ 1.5
MBD3-208ENST00000590830 IKZF4Q9H2S9 585 aa24.45■■□□□ 1.5
MBD3-208ENST00000590830 CHST7Q9NS84 486 aa24.45■■□□□ 1.5
MBD3-208ENST00000590830 STK39Q9UEW8 545 aa24.45■■□□□ 1.5
MBD3-208ENST00000590830 ADAM28Q9UKQ2 775 aa24.45■■□□□ 1.5
MBD3-208ENST00000590830 HCFC2Q9Y5Z7 792 aa24.45■■□□□ 1.5
MBD3-208ENST00000590830 TDRD15B5MCY1 1934 aaKnown RBP24.44■■□□□ 1.5
MBD3-208ENST00000590830 FRMD3A2A2Y4 597 aa24.44■■□□□ 1.5
MBD3-208ENST00000590830 ANKRD63C9JTQ0 380 aa24.44■■□□□ 1.5
MBD3-208ENST00000590830 KIF4AO95239 1232 aa24.44■■□□□ 1.5
MBD3-208ENST00000590830 CNPP09543 421 aaKnown RBP24.44■■□□□ 1.5
MBD3-208ENST00000590830 SCP2P22307 547 aa24.44■■□□□ 1.5
MBD3-208ENST00000590830 YARSP54577 528 aaKnown RBP24.44■■□□□ 1.5
MBD3-208ENST00000590830 SOX4Q06945 474 aaPredicted RBP24.44■■□□□ 1.5
MBD3-208ENST00000590830 SMAD4Q13485 552 aaKnown RBP24.44■■□□□ 1.5
MBD3-208ENST00000590830 RESP18Q5W5W9 173 aa24.44■■□□□ 1.5
MBD3-208ENST00000590830 FUT10Q6P4F1 479 aa24.44■■□□□ 1.5
MBD3-208ENST00000590830 SYCE2Q6PIF2 218 aa24.44■■□□□ 1.5
MBD3-208ENST00000590830 CD300LGQ6UXG3 332 aa24.44■■□□□ 1.5
MBD3-208ENST00000590830 MAP4K3Q8IVH8 894 aa24.44■■□□□ 1.5
MBD3-208ENST00000590830 SMRP1Q8NCR6 262 aa24.44■■□□□ 1.5
MBD3-208ENST00000590830 DHX58Q96C10 678 aa24.44■■□□□ 1.5
MBD3-208ENST00000590830 BICD1Q96G01 975 aa24.44■■□□□ 1.5
MBD3-208ENST00000590830 S1PR5Q9H228 398 aa24.44■■□□□ 1.5
MBD3-208ENST00000590830 KBTBD4Q9NVX7 518 aa24.44■■□□□ 1.5
MBD3-208ENST00000590830 TBC1D7Q9P0N9 293 aa24.44■■□□□ 1.5
MBD3-208ENST00000590830 TISP43B9A030 160 aa24.43■■□□□ 1.5
MBD3-208ENST00000590830 TNFRSF10AO00220 468 aa24.43■■□□□ 1.5
MBD3-208ENST00000590830 C2CD2LO14523 706 aa24.43■■□□□ 1.5
MBD3-208ENST00000590830 FAM189A1O60320 539 aa24.43■■□□□ 1.5
MBD3-208ENST00000590830 TADA2AO75478 443 aa24.43■■□□□ 1.5
MBD3-208ENST00000590830 PPP1R37O75864 691 aa24.43■■□□□ 1.5
MBD3-208ENST00000590830 LIG4P49917 911 aa24.43■■□□□ 1.5
MBD3-208ENST00000590830 SMAD2Q15796 467 aaKnown RBP24.43■■□□□ 1.5
MBD3-208ENST00000590830 ZBTB41Q5SVQ8 909 aa24.43■■□□□ 1.5
MBD3-208ENST00000590830 ANKRD54Q6NXT1 300 aa24.43■■□□□ 1.5
MBD3-208ENST00000590830 HASPINQ8TF76 798 aa24.43■■□□□ 1.5
MBD3-208ENST00000590830 GOLGA2P5Q9HBQ8 144 aa24.43■■□□□ 1.5
MBD3-208ENST00000590830 MRPL17Q9NRX2 175 aaKnown RBP24.43■■□□□ 1.5
MBD3-208ENST00000590830 TOPORSQ9NS56 1045 aaPredicted RBP24.43■■□□□ 1.5
MBD3-208ENST00000590830 FSD2A1L4K1 749 aa24.42■■□□□ 1.5
MBD3-208ENST00000590830 HNRNPDLO14979 420 aaKnown RBP24.42■■□□□ 1.5
MBD3-208ENST00000590830 KCNE1P15382 129 aa24.42■■□□□ 1.5
MBD3-208ENST00000590830 EPCAMP16422 314 aa24.42■■□□□ 1.5
MBD3-208ENST00000590830 GAP43P17677 238 aa24.42■■□□□ 1.5
MBD3-208ENST00000590830 TNFSF9P41273 254 aa24.42■■□□□ 1.5
MBD3-208ENST00000590830 DSG1Q02413 1049 aa24.42■■□□□ 1.5
MBD3-208ENST00000590830 KCNA1Q09470 495 aa24.42■■□□□ 1.5
MBD3-208ENST00000590830 LEO1Q8WVC0 666 aaPredicted RBP24.42■■□□□ 1.5
MBD3-208ENST00000590830 FGFBP2Q9BYJ0 223 aa24.42■■□□□ 1.5
MBD3-208ENST00000590830 CNTN3Q9P232 1028 aa24.42■■□□□ 1.5
MBD3-208ENST00000590830 SEL1LQ9UBV2 794 aa24.42■■□□□ 1.5
MBD3-208ENST00000590830 A0A0B4J269 797 aa24.41■■□□□ 1.5
MBD3-208ENST00000590830 POLR2DO15514 142 aaKnown RBP24.41■■□□□ 1.5
MBD3-208ENST00000590830 IDEP14735 1019 aa24.41■■□□□ 1.5
MBD3-208ENST00000590830 MATR3P43243 847 aaKnown RBP eCLIP24.41■■□□□ 1.5
MBD3-208ENST00000590830 GLUD2P49448 558 aa24.41■■□□□ 1.5
MBD3-208ENST00000590830 CLCNKBP51801 687 aa24.41■■□□□ 1.5
MBD3-208ENST00000590830 CASP5P51878 434 aa24.41■■□□□ 1.5
MBD3-208ENST00000590830 BECN1Q14457 450 aa24.41■■□□□ 1.5
MBD3-208ENST00000590830 HERC4Q5GLZ8 1057 aaPredicted RBP24.41■■□□□ 1.5
MBD3-208ENST00000590830 IQUBQ8NA54 791 aa24.41■■□□□ 1.5
MBD3-208ENST00000590830 C18orf25Q96B23 403 aaPredicted RBP24.41■■□□□ 1.5
MBD3-208ENST00000590830 TNMDQ9H2S6 317 aa24.41■■□□□ 1.5
MBD3-208ENST00000590830 CUEDC2Q9H467 287 aa24.41■■□□□ 1.5
MBD3-208ENST00000590830 MRPL44Q9H9J2 332 aaKnown RBP24.41■■□□□ 1.5
MBD3-208ENST00000590830 RXFP1Q9HBX9 757 aa24.41■■□□□ 1.5
MBD3-208ENST00000590830 PANK4Q9NVE7 773 aa24.41■■□□□ 1.5
MBD3-208ENST00000590830 URODP06132 367 aa24.4■■□□□ 1.5
MBD3-208ENST00000590830 CLTAP09496 248 aa24.4■■□□□ 1.5
MBD3-208ENST00000590830 UPP1Q16831 310 aa24.4■■□□□ 1.5
MBD3-208ENST00000590830 USP41Q3LFD5 358 aa24.4■■□□□ 1.5
MBD3-208ENST00000590830 KANK3Q6NY19 840 aa24.4■■□□□ 1.5
MBD3-208ENST00000590830 DCLRE1AQ6PJP8 1040 aa24.4■■□□□ 1.5
MBD3-208ENST00000590830 TMEM130Q8N3G9 435 aa24.4■■□□□ 1.5
MBD3-208ENST00000590830 CASP10Q92851 521 aa24.4■■□□□ 1.5
MBD3-208ENST00000590830 APOL5Q9BWW9 433 aa24.4■■□□□ 1.5
MBD3-208ENST00000590830 EMILIN2Q9BXX0 1053 aa24.4■■□□□ 1.5
MBD3-208ENST00000590830 USP15Q9Y4E8 981 aaPredicted RBP24.4■■□□□ 1.5
MBD3-208ENST00000590830 STYXL1Q9Y6J8 313 aa24.4■■□□□ 1.5
MBD3-208ENST00000590830 BDP1A6H8Y1 2624 aa24.4■■□□□ 1.5
MBD3-208ENST00000590830 C5orf42Q9H799 3197 aa24.39■■□□□ 1.5
MBD3-208ENST00000590830 TTC26A0AVF1 554 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms