RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 DDX19AQ9NUU7 478 aaKnown RBP23.97■■□□□ 1.43
DDX39A-215ENST00000590696 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.97■■□□□ 1.439e-7■■■■□ 24.3
DDX39A-215ENST00000590696 FBXW11Q9UKB1 542 aa23.97■■□□□ 1.43
DDX39A-215ENST00000590696 PROB1E7EW31 1015 aa23.96■■□□□ 1.43
DDX39A-215ENST00000590696 ELAVL2Q12926 359 aaKnown RBP23.96■■□□□ 1.43
DDX39A-215ENST00000590696 ATF7IP2Q5U623 682 aa23.96■■□□□ 1.43
DDX39A-215ENST00000590696 NXPE3Q969Y0 559 aa23.96■■□□□ 1.43
DDX39A-215ENST00000590696 WNT16Q9UBV4 365 aa23.96■■□□□ 1.43
DDX39A-215ENST00000590696 K7ERI5 159 aa23.95■■□□□ 1.42
DDX39A-215ENST00000590696 LAMP2P13473 410 aa23.95■■□□□ 1.42
DDX39A-215ENST00000590696 U2AF2P26368 475 aaKnown RBP eCLIP23.95■■□□□ 1.42
DDX39A-215ENST00000590696 PTGDRQ13258 359 aa23.95■■□□□ 1.42
DDX39A-215ENST00000590696 GLRA4Q5JXX5 417 aa23.95■■□□□ 1.42
DDX39A-215ENST00000590696 SNX29Q8TEQ0 813 aa23.95■■□□□ 1.42
DDX39A-215ENST00000590696 KIF2CQ99661 725 aa23.95■■□□□ 1.42
DDX39A-215ENST00000590696 RTP3Q9BQQ7 232 aa23.95■■□□□ 1.42
DDX39A-215ENST00000590696 STK24Q9Y6E0 443 aa23.95■■□□□ 1.42
DDX39A-215ENST00000590696 CACNA1HO95180 2353 aa23.95■■□□□ 1.42
DDX39A-215ENST00000590696 STK25O00506 426 aa23.94■■□□□ 1.42
DDX39A-215ENST00000590696 IGFBP6P24592 240 aaPredicted RBP23.94■■□□□ 1.42
DDX39A-215ENST00000590696 NBL1P41271 181 aa23.94■■□□□ 1.42
DDX39A-215ENST00000590696 TOB1P50616 345 aaPredicted RBP23.94■■□□□ 1.42
DDX39A-215ENST00000590696 LIN9Q5TKA1 542 aa23.94■■□□□ 1.42
DDX39A-215ENST00000590696 PDXDC1Q6P996 788 aa23.94■■□□□ 1.42
DDX39A-215ENST00000590696 GRASPQ7Z6J2 395 aaPredicted RBP23.94■■□□□ 1.42
DDX39A-215ENST00000590696 IGSF22Q8N9C0 903 aa23.94■■□□□ 1.42
DDX39A-215ENST00000590696 RAB34Q9BZG1 259 aa23.94■■□□□ 1.42
DDX39A-215ENST00000590696 DAXXQ9UER7 740 aaPredicted RBP23.94■■□□□ 1.42
DDX39A-215ENST00000590696 PCDHB6Q9Y5E3 794 aa23.94■■□□□ 1.42
DDX39A-215ENST00000590696 DOCK8Q8NF50 2099 aa23.93■■□□□ 1.42
DDX39A-215ENST00000590696 KRBA1A5PL33 1030 aa23.93■■□□□ 1.42
DDX39A-215ENST00000590696 E9PMD0 336 aa23.93■■□□□ 1.42
DDX39A-215ENST00000590696 ADAM12O43184 909 aa23.93■■□□□ 1.42
DDX39A-215ENST00000590696 SRFP11831 508 aa23.93■■□□□ 1.42
DDX39A-215ENST00000590696 FSHRP23945 695 aa23.93■■□□□ 1.42
DDX39A-215ENST00000590696 PPM1LQ5SGD2 360 aa23.93■■□□□ 1.42
DDX39A-215ENST00000590696 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.93■■□□□ 1.42
DDX39A-215ENST00000590696 CCDC105Q8IYK2 499 aa23.93■■□□□ 1.42
DDX39A-215ENST00000590696 PPP1R10Q96QC0 940 aaKnown RBP23.93■■□□□ 1.42
DDX39A-215ENST00000590696 CA14Q9ULX7 337 aa23.93■■□□□ 1.42
DDX39A-215ENST00000590696 DNM3Q9UQ16 869 aa23.93■■□□□ 1.42
DDX39A-215ENST00000590696 TNFSF13BQ9Y275 285 aa23.93■■□□□ 1.42
DDX39A-215ENST00000590696 CCDC169A6NNP5 214 aa23.92■■□□□ 1.42
DDX39A-215ENST00000590696 B3GAT3O94766 335 aa23.92■■□□□ 1.42
DDX39A-215ENST00000590696 C8AP07357 584 aa23.92■■□□□ 1.42
DDX39A-215ENST00000590696 HNRNPA1P09651 372 aaKnown RBP eCLIP23.92■■□□□ 1.42
DDX39A-215ENST00000590696 CLCNKBP51801 687 aa23.92■■□□□ 1.42
DDX39A-215ENST00000590696 PEX3P56589 373 aa23.92■■□□□ 1.42
DDX39A-215ENST00000590696 DCLRE1AQ6PJP8 1040 aa23.92■■□□□ 1.42
DDX39A-215ENST00000590696 ASCL5Q7RTU5 278 aa23.92■■□□□ 1.42
DDX39A-215ENST00000590696 APBB1IPQ7Z5R6 666 aaPredicted RBP23.92■■□□□ 1.42
DDX39A-215ENST00000590696 ST13P5Q8NFI4 369 aaPredicted RBP23.92■■□□□ 1.42
DDX39A-215ENST00000590696 MYO15AQ9UKN7 3530 aa23.92■■□□□ 1.42
DDX39A-215ENST00000590696 VWA8A3KMH1 1905 aa23.91■■□□□ 1.42
DDX39A-215ENST00000590696 PP2D1A8MPX8 630 aa23.91■■□□□ 1.42
DDX39A-215ENST00000590696 ANHXE9PGG2 379 aa23.91■■□□□ 1.42
DDX39A-215ENST00000590696 TMEM189-UBE2V1I3L0A0 370 aa23.91■■□□□ 1.42
DDX39A-215ENST00000590696 CCL16O15467 120 aa23.91■■□□□ 1.42
DDX39A-215ENST00000590696 FGFR3P22607 806 aa23.91■■□□□ 1.42
DDX39A-215ENST00000590696 OR1D2P34982 312 aa23.91■■□□□ 1.42
DDX39A-215ENST00000590696 NPTX2P47972 431 aa23.91■■□□□ 1.42
DDX39A-215ENST00000590696 NTHL1P78549 312 aa23.91■■□□□ 1.42
DDX39A-215ENST00000590696 HTR4Q13639 388 aa23.91■■□□□ 1.42
DDX39A-215ENST00000590696 KRT79Q5XKE5 535 aa23.91■■□□□ 1.42
DDX39A-215ENST00000590696 CEP120Q8N960 986 aa23.91■■□□□ 1.42
DDX39A-215ENST00000590696 DTWD2Q8NBA8 298 aa23.91■■□□□ 1.42
DDX39A-215ENST00000590696 GPR152Q8TDT2 470 aa23.91■■□□□ 1.42
DDX39A-215ENST00000590696 ACO2Q99798 780 aaKnown RBP23.91■■□□□ 1.42
DDX39A-215ENST00000590696 GOLGA2P5Q9HBQ8 144 aa23.91■■□□□ 1.42
DDX39A-215ENST00000590696 POLIQ9UNA4 740 aa23.91■■□□□ 1.42
DDX39A-215ENST00000590696 ZFP37Q9Y6Q3 630 aaPredicted RBP23.91■■□□□ 1.42
DDX39A-215ENST00000590696 NUMBLQ9Y6R0 609 aa23.91■■□□□ 1.42
DDX39A-215ENST00000590696 ZFHX2Q9C0A1 2572 aaPredicted RBP23.91■■□□□ 1.42
DDX39A-215ENST00000590696 PHLPP2Q6ZVD8 1323 aa23.9■■□□□ 1.42
DDX39A-215ENST00000590696 SMIM28A0A1B0GU29 152 aa23.9■■□□□ 1.42
DDX39A-215ENST00000590696 HIP1RO75146 1068 aa23.9■■□□□ 1.42
DDX39A-215ENST00000590696 RFX1P22670 979 aa23.9■■□□□ 1.42
DDX39A-215ENST00000590696 CDC25AP30304 524 aa23.9■■□□□ 1.42
DDX39A-215ENST00000590696 HOXA9P31269 272 aa23.9■■□□□ 1.42
DDX39A-215ENST00000590696 RAB33AQ14088 237 aa23.9■■□□□ 1.42
DDX39A-215ENST00000590696 IL17AQ16552 155 aa23.9■■□□□ 1.42
DDX39A-215ENST00000590696 UPP1Q16831 310 aa23.9■■□□□ 1.42
DDX39A-215ENST00000590696 CD300LGQ6UXG3 332 aa23.9■■□□□ 1.42
DDX39A-215ENST00000590696 FRMD5Q7Z6J6 570 aa23.9■■□□□ 1.42
DDX39A-215ENST00000590696 DAW1Q8N136 415 aa23.9■■□□□ 1.42
DDX39A-215ENST00000590696 UROC1Q96N76 676 aa23.9■■□□□ 1.42
DDX39A-215ENST00000590696 CCDC94Q9BW85 323 aaPredicted RBP23.9■■□□□ 1.42
DDX39A-215ENST00000590696 CDT1Q9H211 546 aa23.9■■□□□ 1.42
DDX39A-215ENST00000590696 TMEM134Q9H6X4 195 aa23.9■■□□□ 1.42
DDX39A-215ENST00000590696 PRR23AA6NEV1 266 aa23.89■■□□□ 1.41
DDX39A-215ENST00000590696 LAD1O00515 517 aa23.89■■□□□ 1.41
DDX39A-215ENST00000590696 XYLBO75191 536 aa23.89■■□□□ 1.41
DDX39A-215ENST00000590696 GRM5P41594 1212 aa23.89■■□□□ 1.41
DDX39A-215ENST00000590696 YARSP54577 528 aaKnown RBP23.89■■□□□ 1.41
DDX39A-215ENST00000590696 OSTNP61366 133 aa23.89■■□□□ 1.41
DDX39A-215ENST00000590696 ANGPT1Q15389 498 aa23.89■■□□□ 1.41
DDX39A-215ENST00000590696 AXDND1Q5T1B0 1012 aaPredicted RBP23.89■■□□□ 1.41
DDX39A-215ENST00000590696 SLC7A14Q8TBB6 771 aa23.89■■□□□ 1.41
DDX39A-215ENST00000590696 RUSC1Q9BVN2 902 aa23.89■■□□□ 1.41
DDX39A-215ENST00000590696 PTPRHQ9HD43 1115 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms