RNA–Protein interactions for RNA: ENST00000590605.2

TCF3-214, Transcript of transcription factor 3, humanhuman

TSL 2

Gene TCF3, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-214ENST00000590605 LINC01599Q8WXQ3 324 aa17.14■□□□□ 0.33
TCF3-214ENST00000590605 BORCS6Q96GS4 357 aa17.14■□□□□ 0.33
TCF3-214ENST00000590605 CNOT6LQ96LI5 555 aaKnown RBP17.14■□□□□ 0.33
TCF3-214ENST00000590605 FNBP1Q96RU3 617 aa17.14■□□□□ 0.33
TCF3-214ENST00000590605 SAMSN1Q9NSI8 373 aaKnown RBP17.14■□□□□ 0.33
TCF3-214ENST00000590605 SNTG2Q9NY99 539 aa17.14■□□□□ 0.33
TCF3-214ENST00000590605 PCDHB7Q9Y5E2 793 aa17.14■□□□□ 0.33
TCF3-214ENST00000590605 TTC26A0AVF1 554 aa17.13■□□□□ 0.33
TCF3-214ENST00000590605 KCNJ18B7U540 433 aa17.13■□□□□ 0.33
TCF3-214ENST00000590605 INPPL1O15357 1258 aa17.13■□□□□ 0.33
TCF3-214ENST00000590605 AMHP03971 560 aa17.13■□□□□ 0.33
TCF3-214ENST00000590605 GTF2H1P32780 548 aa17.13■□□□□ 0.33
TCF3-214ENST00000590605 VAMP7P51809 220 aa17.13■□□□□ 0.33
TCF3-214ENST00000590605 CLDN10P78369 228 aa17.13■□□□□ 0.33
TCF3-214ENST00000590605 BFSP1Q12934 665 aa17.13■□□□□ 0.33
TCF3-214ENST00000590605 KCNJ12Q14500 433 aa17.13■□□□□ 0.33
TCF3-214ENST00000590605 ENOX2Q16206 610 aaKnown RBP17.13■□□□□ 0.33
TCF3-214ENST00000590605 ALKAL1Q6UXT8 129 aa17.13■□□□□ 0.33
TCF3-214ENST00000590605 GAS2L3Q86XJ1 694 aa17.13■□□□□ 0.33
TCF3-214ENST00000590605 RDH13Q8NBN7 331 aa17.13■□□□□ 0.33
TCF3-214ENST00000590605 PARD3BQ8TEW8 1205 aa17.13■□□□□ 0.33
TCF3-214ENST00000590605 NXF3Q9H4D5 531 aaKnown RBP17.13■□□□□ 0.33
TCF3-214ENST00000590605 KANSL3Q9P2N6 904 aa17.13■□□□□ 0.33
TCF3-214ENST00000590605 PARP2Q9UGN5 583 aa17.13■□□□□ 0.33
TCF3-214ENST00000590605 LRFN2Q9ULH4 789 aa17.13■□□□□ 0.33
TCF3-214ENST00000590605 C2CD2Q9Y426 696 aa17.13■□□□□ 0.33
TCF3-214ENST00000590605 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.12■□□□□ 0.33
TCF3-214ENST00000590605 XPOTO43592 962 aaKnown RBP17.12■□□□□ 0.33
TCF3-214ENST00000590605 RECQL4O94761 1208 aa17.12■□□□□ 0.33
TCF3-214ENST00000590605 KCNE1P15382 129 aa17.12■□□□□ 0.33
TCF3-214ENST00000590605 TNFSF9P41273 254 aa17.12■□□□□ 0.33
TCF3-214ENST00000590605 KCNJ6P48051 423 aa17.12■□□□□ 0.33
TCF3-214ENST00000590605 SLC10A6Q3KNW5 377 aa17.12■□□□□ 0.33
TCF3-214ENST00000590605 WDR49Q8IV35 697 aa17.12■□□□□ 0.33
TCF3-214ENST00000590605 TRIM59Q8IWR1 403 aa17.12■□□□□ 0.33
TCF3-214ENST00000590605 CRIPAKQ8N1N5 446 aa17.12■□□□□ 0.33
TCF3-214ENST00000590605 CEP120Q8N960 986 aa17.12■□□□□ 0.33
TCF3-214ENST00000590605 PHOSPHO2Q8TCD6 241 aa17.12■□□□□ 0.33
TCF3-214ENST00000590605 CACTINQ8WUQ7 758 aaKnown RBP17.12■□□□□ 0.33
TCF3-214ENST00000590605 HERVK_113Q902F9 699 aa17.12■□□□□ 0.33
TCF3-214ENST00000590605 EEF2KMTQ96G04 330 aa17.12■□□□□ 0.33
TCF3-214ENST00000590605 SNX27Q96L92 541 aa17.12■□□□□ 0.33
TCF3-214ENST00000590605 RBSNQ9H1K0 784 aa17.12■□□□□ 0.33
TCF3-214ENST00000590605 HSD3B7Q9H2F3 369 aa17.12■□□□□ 0.33
TCF3-214ENST00000590605 RSAD1Q9HA92 442 aa17.12■□□□□ 0.33
TCF3-214ENST00000590605 CNTN3Q9P232 1028 aa17.12■□□□□ 0.33
TCF3-214ENST00000590605 LIMA1Q9UHB6 759 aaKnown RBP17.12■□□□□ 0.33
TCF3-214ENST00000590605 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.12■□□□□ 0.33
TCF3-214ENST00000590605 PMM2O15305 246 aa17.11■□□□□ 0.33
TCF3-214ENST00000590605 N4BP1O75113 896 aaKnown RBP17.11■□□□□ 0.33
TCF3-214ENST00000590605 CXCL8P10145 99 aa17.11■□□□□ 0.33
TCF3-214ENST00000590605 ATF7P17544 494 aaPredicted RBP17.11■□□□□ 0.33
TCF3-214ENST00000590605 MTIF2P46199 727 aaKnown RBP17.11■□□□□ 0.33
TCF3-214ENST00000590605 OSTNP61366 133 aa17.11■□□□□ 0.33
TCF3-214ENST00000590605 MAN2A1Q16706 1144 aa17.11■□□□□ 0.33
TCF3-214ENST00000590605 TMEM240Q5SV17 173 aa17.11■□□□□ 0.33
TCF3-214ENST00000590605 ZBTB41Q5SVQ8 909 aa17.11■□□□□ 0.33
TCF3-214ENST00000590605 GLB1LQ6UWU2 654 aa17.11■□□□□ 0.33
TCF3-214ENST00000590605 AGMOQ6ZNB7 445 aa17.11■□□□□ 0.33
TCF3-214ENST00000590605 ZNF365Q70YC5 407 aa17.11■□□□□ 0.33
TCF3-214ENST00000590605 C16orf59Q7L2K0 433 aa17.11■□□□□ 0.33
TCF3-214ENST00000590605 RNF214Q8ND24 703 aa17.11■□□□□ 0.33
TCF3-214ENST00000590605 ZSWIM2Q8NEG5 633 aa17.11■□□□□ 0.33
TCF3-214ENST00000590605 TOP1MTQ969P6 601 aa17.11■□□□□ 0.33
TCF3-214ENST00000590605 TUBGCP2Q9BSJ2 902 aa17.11■□□□□ 0.33
TCF3-214ENST00000590605 SLC38A7Q9NVC3 462 aa17.11■□□□□ 0.33
TCF3-214ENST00000590605 HES2Q9Y543 173 aa17.11■□□□□ 0.33
TCF3-214ENST00000590605 CARNS1A5YM72 827 aa17.1■□□□□ 0.33
TCF3-214ENST00000590605 LACTBL1A8MY62 500 aa17.1■□□□□ 0.33
TCF3-214ENST00000590605 P4HA2O15460 535 aa17.1■□□□□ 0.33
TCF3-214ENST00000590605 ACRP10323 421 aa17.1■□□□□ 0.33
TCF3-214ENST00000590605 CYP3A5P20815 502 aa17.1■□□□□ 0.33
TCF3-214ENST00000590605 AKAP5P24588 427 aa17.1■□□□□ 0.33
TCF3-214ENST00000590605 WDR5P61964 334 aaKnown RBP17.1■□□□□ 0.33
TCF3-214ENST00000590605 CETN1Q12798 172 aa17.1■□□□□ 0.33
TCF3-214ENST00000590605 DUOXA2Q1HG44 320 aa17.1■□□□□ 0.33
TCF3-214ENST00000590605 TCTN1Q2MV58 587 aa17.1■□□□□ 0.33
TCF3-214ENST00000590605 FILIP1LQ4L180 1135 aa17.1■□□□□ 0.33
TCF3-214ENST00000590605 SEZ6Q53EL9 994 aa17.1■□□□□ 0.33
TCF3-214ENST00000590605 TMEM192Q8IY95 271 aa17.1■□□□□ 0.33
TCF3-214ENST00000590605 URGCPQ8TCY9 931 aa17.1■□□□□ 0.33
TCF3-214ENST00000590605 SLC35C1Q96A29 364 aa17.1■□□□□ 0.33
TCF3-214ENST00000590605 RPS6KC1Q96S38 1066 aa17.1■□□□□ 0.33
TCF3-214ENST00000590605 CGRRF1Q99675 332 aa17.1■□□□□ 0.33
TCF3-214ENST00000590605 RNF39Q9H2S5 420 aa17.1■□□□□ 0.33
TCF3-214ENST00000590605 ARL5CA6NH57 179 aa17.09■□□□□ 0.33
TCF3-214ENST00000590605 AFPP02771 609 aaKnown RBP17.09■□□□□ 0.33
TCF3-214ENST00000590605 TPM3P06753 285 aa17.09■□□□□ 0.33
TCF3-214ENST00000590605 TNNI1P19237 187 aa17.09■□□□□ 0.33
TCF3-214ENST00000590605 KRT31Q15323 416 aa17.09■□□□□ 0.33
TCF3-214ENST00000590605 CREBRFQ8IUR6 639 aa17.09■□□□□ 0.33
TCF3-214ENST00000590605 ABI1Q8IZP0 508 aa17.09■□□□□ 0.33
TCF3-214ENST00000590605 CCDC127Q96BQ5 260 aa17.09■□□□□ 0.33
TCF3-214ENST00000590605 FAM212AQ96EL1 285 aa17.09■□□□□ 0.33
TCF3-214ENST00000590605 ANKRD36BP1Q96IX9 119 aa17.09■□□□□ 0.33
TCF3-214ENST00000590605 SLC9A7Q96T83 725 aa17.09■□□□□ 0.33
TCF3-214ENST00000590605 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.09■□□□□ 0.331e-9■□□□□ 9.7
TCF3-214ENST00000590605 APOL6Q9BWW8 343 aa17.09■□□□□ 0.33
TCF3-214ENST00000590605 MRPL9Q9BYD2 267 aaKnown RBP17.09■□□□□ 0.33
TCF3-214ENST00000590605 TMEM117Q9H0C3 514 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms