RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 USP18Q9UMW8 372 aa19.24■□□□□ 0.67
RETREG3-210ENST00000590541 SPTBN2O15020 2390 aa19.24■□□□□ 0.67
RETREG3-210ENST00000590541 ZMYM2Q9UBW7 1377 aa19.23■□□□□ 0.67
RETREG3-210ENST00000590541 TBC1D4O60343 1298 aa19.23■□□□□ 0.67
RETREG3-210ENST00000590541 XYLBO75191 536 aa19.23■□□□□ 0.67
RETREG3-210ENST00000590541 NPTXRO95502 500 aa19.23■□□□□ 0.67
RETREG3-210ENST00000590541 POU2F2P09086 479 aa19.23■□□□□ 0.67
RETREG3-210ENST00000590541 CAPSQ13938 189 aa19.23■□□□□ 0.67
RETREG3-210ENST00000590541 EPHA7Q15375 998 aa19.23■□□□□ 0.67
RETREG3-210ENST00000590541 PSMD5Q16401 504 aa19.23■□□□□ 0.67
RETREG3-210ENST00000590541 CEP57Q86XR8 500 aa19.23■□□□□ 0.67
RETREG3-210ENST00000590541 SLC7A14Q8TBB6 771 aa19.23■□□□□ 0.67
RETREG3-210ENST00000590541 HAS1Q92839 578 aa19.23■□□□□ 0.67
RETREG3-210ENST00000590541 DYDC2Q96IM9 177 aa19.23■□□□□ 0.67
RETREG3-210ENST00000590541 NELL2Q99435 816 aa19.23■□□□□ 0.67
RETREG3-210ENST00000590541 DNMT3BQ9UBC3 853 aaKnown RBP19.23■□□□□ 0.67
RETREG3-210ENST00000590541 PARP2Q9UGN5 583 aa19.23■□□□□ 0.67
RETREG3-210ENST00000590541 NOTCH4Q99466 2003 aa19.23■□□□□ 0.67
RETREG3-210ENST00000590541 KIF4AO95239 1232 aa19.22■□□□□ 0.67
RETREG3-210ENST00000590541 ADRB1P08588 477 aa19.22■□□□□ 0.67
RETREG3-210ENST00000590541 TUSC3Q13454 348 aa19.22■□□□□ 0.67
RETREG3-210ENST00000590541 TFDP1Q14186 410 aa19.22■□□□□ 0.67
RETREG3-210ENST00000590541 CTTNQ14247 550 aaKnown RBP19.22■□□□□ 0.67
RETREG3-210ENST00000590541 FAM171A1Q5VUB5 890 aa19.22■□□□□ 0.67
RETREG3-210ENST00000590541 SLC27A1Q6PCB7 646 aa19.22■□□□□ 0.67
RETREG3-210ENST00000590541 POTEHQ6S545 545 aa19.22■□□□□ 0.67
RETREG3-210ENST00000590541 PLA2G2FQ9BZM2 168 aa19.22■□□□□ 0.67
RETREG3-210ENST00000590541 A0A1B0GUA9 196 aa19.21■□□□□ 0.67
RETREG3-210ENST00000590541 CASTOR2A6NHX0 329 aa19.21■□□□□ 0.67
RETREG3-210ENST00000590541 NCAM2O15394 837 aa19.21■□□□□ 0.67
RETREG3-210ENST00000590541 TDGF1P13385 188 aa19.21■□□□□ 0.67
RETREG3-210ENST00000590541 XBP1P17861 261 aa19.21■□□□□ 0.67
RETREG3-210ENST00000590541 MTAPQ13126 283 aa19.21■□□□□ 0.67
RETREG3-210ENST00000590541 ST3GAL2Q16842 350 aa19.21■□□□□ 0.67
RETREG3-210ENST00000590541 AXDND1Q5T1B0 1012 aaPredicted RBP19.21■□□□□ 0.67
RETREG3-210ENST00000590541 PPP4R3AQ6IN85 833 aa19.21■□□□□ 0.67
RETREG3-210ENST00000590541 KRT25Q7Z3Z0 450 aa19.21■□□□□ 0.67
RETREG3-210ENST00000590541 ING5Q8WYH8 240 aa19.21■□□□□ 0.67
RETREG3-210ENST00000590541 AIFM3Q96NN9 605 aa19.21■□□□□ 0.67
RETREG3-210ENST00000590541 NFKBIZQ9BYH8 718 aa19.21■□□□□ 0.67
RETREG3-210ENST00000590541 ZSWIM4Q9H7M6 989 aa19.21■□□□□ 0.67
RETREG3-210ENST00000590541 HEBP1Q9NRV9 189 aa19.21■□□□□ 0.67
RETREG3-210ENST00000590541 GMEB2Q9UKD1 530 aa19.21■□□□□ 0.67
RETREG3-210ENST00000590541 KCNH3Q9ULD8 1083 aa19.21■□□□□ 0.67
RETREG3-210ENST00000590541 ECI2O75521 394 aa19.2■□□□□ 0.66
RETREG3-210ENST00000590541 ARL2P36404 184 aa19.2■□□□□ 0.66
RETREG3-210ENST00000590541 CYP4A11Q02928 519 aa19.2■□□□□ 0.66
RETREG3-210ENST00000590541 ADCY1Q08828 1119 aa19.2■□□□□ 0.66
RETREG3-210ENST00000590541 SPIRE1Q08AE8 756 aa19.2■□□□□ 0.66
RETREG3-210ENST00000590541 UVSSAQ2YD98 709 aa19.2■□□□□ 0.66
RETREG3-210ENST00000590541 PABPC1LQ4VXU2 614 aaKnown RBP19.2■□□□□ 0.66
RETREG3-210ENST00000590541 NCAPH2Q6IBW4 605 aa19.2■□□□□ 0.66
RETREG3-210ENST00000590541 ZNF852Q6ZMS4 543 aa19.2■□□□□ 0.66
RETREG3-210ENST00000590541 FAM126AQ9BYI3 521 aaPredicted RBP19.2■□□□□ 0.66
RETREG3-210ENST00000590541 PTGESO14684 152 aa19.19■□□□□ 0.66
RETREG3-210ENST00000590541 TBX3O15119 743 aa19.19■□□□□ 0.66
RETREG3-210ENST00000590541 PFKFB2O60825 505 aa19.19■□□□□ 0.66
RETREG3-210ENST00000590541 SLITRK3O94933 977 aa19.19■□□□□ 0.66
RETREG3-210ENST00000590541 GLRA2P23416 452 aa19.19■□□□□ 0.66
RETREG3-210ENST00000590541 STK3Q13188 491 aa19.19■□□□□ 0.66
RETREG3-210ENST00000590541 RAB33AQ14088 237 aa19.19■□□□□ 0.66
RETREG3-210ENST00000590541 NAB2Q15742 525 aa19.19■□□□□ 0.66
RETREG3-210ENST00000590541 NEK8Q86SG6 692 aa19.19■□□□□ 0.66
RETREG3-210ENST00000590541 ZNF687Q8N1G0 1237 aa19.19■□□□□ 0.66
RETREG3-210ENST00000590541 MCRS1Q96EZ8 462 aa19.19■□□□□ 0.66
RETREG3-210ENST00000590541 CXCL16Q9H2A7 254 aa19.19■□□□□ 0.66
RETREG3-210ENST00000590541 VWA8A3KMH1 1905 aa19.19■□□□□ 0.66
RETREG3-210ENST00000590541 STK36Q9NRP7 1315 aa19.19■□□□□ 0.66
RETREG3-210ENST00000590541 OR1D2P34982 312 aa19.18■□□□□ 0.66
RETREG3-210ENST00000590541 SPEM2Q0P670 501 aa19.18■□□□□ 0.66
RETREG3-210ENST00000590541 SLC5A9Q2M3M2 681 aa19.18■□□□□ 0.66
RETREG3-210ENST00000590541 TPH2Q8IWU9 490 aa19.18■□□□□ 0.66
RETREG3-210ENST00000590541 LARP6Q9BRS8 491 aaKnown RBP19.18■□□□□ 0.66
RETREG3-210ENST00000590541 KCNJ14Q9UNX9 436 aa19.18■□□□□ 0.66
RETREG3-210ENST00000590541 MRPS17Q9Y2R5 130 aaKnown RBP19.18■□□□□ 0.66
RETREG3-210ENST00000590541 MRPS23Q9Y3D9 190 aaKnown RBP19.18■□□□□ 0.66
RETREG3-210ENST00000590541 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.18■□□□□ 0.66
RETREG3-210ENST00000590541 CCNT1O60563 726 aaKnown RBP19.17■□□□□ 0.66
RETREG3-210ENST00000590541 DGAT1O75907 488 aa19.17■□□□□ 0.66
RETREG3-210ENST00000590541 GCFC2P16383 781 aaKnown RBP19.17■□□□□ 0.66
RETREG3-210ENST00000590541 SCRN1Q12765 414 aa19.17■□□□□ 0.66
RETREG3-210ENST00000590541 LPAL2Q16609 132 aa19.17■□□□□ 0.66
RETREG3-210ENST00000590541 TANGO2Q6ICL3 276 aa19.17■□□□□ 0.66
RETREG3-210ENST00000590541 PDXDC1Q6P996 788 aa19.17■□□□□ 0.66
RETREG3-210ENST00000590541 MAMSTRQ6ZN01 415 aa19.17■□□□□ 0.66
RETREG3-210ENST00000590541 POTEDQ86YR6 584 aa19.17■□□□□ 0.66
RETREG3-210ENST00000590541 WASF1Q92558 559 aa19.17■□□□□ 0.66
RETREG3-210ENST00000590541 CHRDQ9H2X0 955 aa19.17■□□□□ 0.66
RETREG3-210ENST00000590541 GDE1Q9NZC3 331 aa19.17■□□□□ 0.66
RETREG3-210ENST00000590541 MTRRQ9UBK8 725 aa19.17■□□□□ 0.66
RETREG3-210ENST00000590541 TPCN1Q9ULQ1 816 aa19.17■□□□□ 0.66
RETREG3-210ENST00000590541 CCDC194A0A1B0GVG4 234 aa19.16■□□□□ 0.66
RETREG3-210ENST00000590541 SLC30A4O14863 429 aa19.16■□□□□ 0.66
RETREG3-210ENST00000590541 LYPLA2O95372 231 aa19.16■□□□□ 0.66
RETREG3-210ENST00000590541 THP07101 528 aa19.16■□□□□ 0.66
RETREG3-210ENST00000590541 RHOP08100 348 aa19.16■□□□□ 0.66
RETREG3-210ENST00000590541 FGFR3P22607 806 aa19.16■□□□□ 0.66
RETREG3-210ENST00000590541 IGFBP6P24592 240 aaPredicted RBP19.16■□□□□ 0.66
RETREG3-210ENST00000590541 ELAVL2Q12926 359 aaKnown RBP19.16■□□□□ 0.66
RETREG3-210ENST00000590541 PPM1JQ5JR12 505 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms