RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 PTPN5P54829 565 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 ECM1Q16610 540 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 LILRA6Q6PI73 481 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 C1orf186Q6ZWK4 172 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 RTL10Q7L3V2 364 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 TAS1R1Q7RTX1 841 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 BRAPQ7Z569 592 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 SPIRE2Q8WWL2 714 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 RIN2Q8WYP3 895 aaPredicted RBP8.35□□□□□ -1.07
NPC1-208ENST00000590301 NXPE3Q969Y0 559 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 TBC1D32Q96NH3 1257 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 NTPCRQ9BSD7 190 aaKnown RBP8.35□□□□□ -1.07
NPC1-208ENST00000590301 TTPALQ9BTX7 342 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 CCDC94Q9BW85 323 aaPredicted RBP8.35□□□□□ -1.07
NPC1-208ENST00000590301 MRPL4Q9BYD3 311 aaKnown RBP8.35□□□□□ -1.07
NPC1-208ENST00000590301 GPR62Q9BZJ7 368 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 WDR6Q9NNW5 1121 aaKnown RBP8.35□□□□□ -1.07
NPC1-208ENST00000590301 SLC38A7Q9NVC3 462 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 SNTG2Q9NY99 539 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 ARHGAP28Q9P2N2 729 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 SMC3Q9UQE7 1217 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 MYO7AQ13402 2215 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 TCF20Q9UGU0 1960 aaKnown RBP8.35□□□□□ -1.07
NPC1-208ENST00000590301 FNDC1Q4ZHG4 1894 aaPredicted RBP8.34□□□□□ -1.07
NPC1-208ENST00000590301 MYH9P35579 1960 aaKnown RBP8.34□□□□□ -1.07
NPC1-208ENST00000590301 CCDC195A0A1B0GUA6 201 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 CASTOR2A6NHX0 329 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 TTLL13PA6NNM8 815 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 E9PMD0 336 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 TGM5O43548 720 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 HIP1RO75146 1068 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 KIF4AO95239 1232 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 POU2F2P09086 479 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 HNRNPA1P09651 372 aaKnown RBP eCLIP8.34□□□□□ -1.07
NPC1-208ENST00000590301 WEE2P0C1S8 567 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 PLS3P13797 630 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 PDCP20941 246 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 SP100P23497 879 aaPredicted RBP8.34□□□□□ -1.07
NPC1-208ENST00000590301 HOXA9P31269 272 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 ABCD1P33897 745 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 PEX3P56589 373 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 NHLH1Q02575 133 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 STRN3Q13033 797 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 NAB2Q15742 525 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 IL17AQ16552 155 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 XKR4Q5GH76 650 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 NT5DC1Q5TFE4 455 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 LIN9Q5TKA1 542 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 EEF1DP3Q658K8 133 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 RINT1Q6NUQ1 792 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 DCLRE1AQ6PJP8 1040 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.34□□□□□ -1.07
NPC1-208ENST00000590301 DAW1Q8N136 415 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 SYT2Q8N9I0 419 aaPredicted RBP8.34□□□□□ -1.07
NPC1-208ENST00000590301 KCNN1Q92952 543 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 DDX27Q96GQ7 796 aaKnown RBP8.34□□□□□ -1.07
NPC1-208ENST00000590301 CDK5RAP3Q96JB5 506 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 PPP1R10Q96QC0 940 aaKnown RBP8.34□□□□□ -1.07
NPC1-208ENST00000590301 ACO2Q99798 780 aaKnown RBP8.34□□□□□ -1.07
NPC1-208ENST00000590301 MMTAG2Q9BU76 263 aaKnown RBP8.34□□□□□ -1.07
NPC1-208ENST00000590301 KIFC3Q9BVG8 833 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 RUSC1Q9BVN2 902 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 PTPRHQ9HD43 1115 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 KMT5AQ9NQR1 393 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.34□□□□□ -1.07
NPC1-208ENST00000590301 IGSF9Q9P2J2 1179 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 LARSQ9P2J5 1176 aaKnown RBP8.34□□□□□ -1.07
NPC1-208ENST00000590301 EPS15L1Q9UBC2 864 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 CDH22Q9UJ99 828 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 GDAQ9Y2T3 454 aa8.34□□□□□ -1.07
NPC1-208ENST00000590301 ZFP37Q9Y6Q3 630 aaPredicted RBP8.34□□□□□ -1.07
NPC1-208ENST00000590301 KIAA1671Q9BY89 1806 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 CLUHO75153 1309 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 VWA3AA6NCI4 1184 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 PP2D1A8MPX8 630 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 F8W810 466 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 TOM1L1O75674 476 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 PPP1R37O75864 691 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 B3GAT3O94766 335 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 KCNE1P15382 129 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 PROZP22891 400 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 LONP1P36776 959 aaKnown RBP8.33□□□□□ -1.08
NPC1-208ENST00000590301 MAPK7Q13164 816 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 TDGQ13569 410 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 PSMD5Q16401 504 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 KYAT1Q16773 422 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 ZNF568Q3ZCX4 644 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 TMEM119Q4V9L6 283 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 RTP2Q5QGT7 225 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 FAM171A1Q5VUB5 890 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 LARP1BQ659C4 914 aaKnown RBP8.33□□□□□ -1.08
NPC1-208ENST00000590301 KANK3Q6NY19 840 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 MPZL3Q6UWV2 235 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 ZPBP2Q6X784 338 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 PALB2Q86YC2 1186 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 LNX1Q8TBB1 728 aaPredicted RBP8.33□□□□□ -1.08
NPC1-208ENST00000590301 SMG7Q92540 1137 aaKnown RBP8.33□□□□□ -1.08
NPC1-208ENST00000590301 ZNF707Q96C28 371 aaPredicted RBP8.33□□□□□ -1.08
NPC1-208ENST00000590301 TCHPQ9BT92 498 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 PRKD2Q9BZL6 878 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms