RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 GRAMD1CQ8IYS0 662 aa15.34■□□□□ 0.05
SCAMP4-212ENST00000590266 HPS3Q969F9 1004 aa15.34■□□□□ 0.05
SCAMP4-212ENST00000590266 SNX27Q96L92 541 aa15.34■□□□□ 0.05
SCAMP4-212ENST00000590266 MSTO1Q9BUK6 570 aa15.34■□□□□ 0.05
SCAMP4-212ENST00000590266 TRIM9Q9C026 710 aa15.34■□□□□ 0.05
SCAMP4-212ENST00000590266 HAPLN2Q9GZV7 340 aa15.34■□□□□ 0.05
SCAMP4-212ENST00000590266 GOLGA2P5Q9HBQ8 144 aa15.34■□□□□ 0.05
SCAMP4-212ENST00000590266 KBTBD4Q9NVX7 518 aa15.34■□□□□ 0.05
SCAMP4-212ENST00000590266 SERTAD1Q9UHV2 236 aa15.34■□□□□ 0.05
SCAMP4-212ENST00000590266 BARX2Q9UMQ3 279 aaPredicted RBP15.34■□□□□ 0.05
SCAMP4-212ENST00000590266 ZMYM2Q9UBW7 1377 aa15.34■□□□□ 0.05
SCAMP4-212ENST00000590266 PRRC2BQ5JSZ5 2229 aaKnown RBP15.33■□□□□ 0.05
SCAMP4-212ENST00000590266 C2orf71A6NGG8 1288 aa15.33■□□□□ 0.04
SCAMP4-212ENST00000590266 ANKRD63C9JTQ0 380 aa15.33■□□□□ 0.04
SCAMP4-212ENST00000590266 TBX10O75333 385 aa15.33■□□□□ 0.04
SCAMP4-212ENST00000590266 CXCL8P10145 99 aa15.33■□□□□ 0.04
SCAMP4-212ENST00000590266 SCP2P22307 547 aa15.33■□□□□ 0.04
SCAMP4-212ENST00000590266 ABCD1P33897 745 aa15.33■□□□□ 0.04
SCAMP4-212ENST00000590266 TNFSF9P41273 254 aa15.33■□□□□ 0.04
SCAMP4-212ENST00000590266 CASP5P51878 434 aa15.33■□□□□ 0.04
SCAMP4-212ENST00000590266 KCNA1Q09470 495 aa15.33■□□□□ 0.04
SCAMP4-212ENST00000590266 DUSP6Q16828 381 aa15.33■□□□□ 0.04
SCAMP4-212ENST00000590266 KIAA1841Q6NSI8 718 aa15.33■□□□□ 0.04
SCAMP4-212ENST00000590266 SLC39A4Q6P5W5 647 aa15.33■□□□□ 0.04
SCAMP4-212ENST00000590266 TAS1R1Q7RTX1 841 aa15.33■□□□□ 0.04
SCAMP4-212ENST00000590266 SYCP3Q8IZU3 236 aa15.33■□□□□ 0.04
SCAMP4-212ENST00000590266 EFHBQ8N7U6 833 aa15.33■□□□□ 0.04
SCAMP4-212ENST00000590266 MRPL43Q8N983 215 aaKnown RBP15.33■□□□□ 0.04
SCAMP4-212ENST00000590266 FAM212AQ96EL1 285 aa15.33■□□□□ 0.04
SCAMP4-212ENST00000590266 B3GALT6Q96L58 329 aa15.33■□□□□ 0.04
SCAMP4-212ENST00000590266 FGFBP2Q9BYJ0 223 aa15.33■□□□□ 0.04
SCAMP4-212ENST00000590266 ADAM28Q9UKQ2 775 aa15.33■□□□□ 0.04
SCAMP4-212ENST00000590266 SMIM28A0A1B0GU29 152 aa15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 KIF4AO95239 1232 aa15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 PIGRP01833 764 aa15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 SOD2P04179 222 aa15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 URODP06132 367 aa15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 CTSAP10619 480 aa15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 CMA1P23946 247 aa15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 ANP32AP39687 249 aaKnown RBP15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 SPAG1Q07617 926 aa15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 ADAM15Q13444 863 aa15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 ZBTB41Q5SVQ8 909 aa15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 L1TD1Q5T7N2 865 aaKnown RBP15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 ADALQ6DHV7 355 aa15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 FUT10Q6P4F1 479 aa15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 FSIP1Q8NA03 581 aa15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 NOC3LQ8WTT2 800 aaKnown RBP15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 PPP1R10Q96QC0 940 aaKnown RBP15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 ACCSQ96QU6 501 aa15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 CDCA3Q99618 268 aaPredicted RBP15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 PYM1Q9BRP8 204 aaKnown RBP15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 ST6GALNAC4Q9H4F1 302 aa15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 MAGEF1Q9HAY2 307 aa15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 OLFML3Q9NRN5 406 aa15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 EXOC7Q9UPT5 735 aa15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 PCDHB13Q9Y5F0 798 aa15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 REV3LO60673 3130 aa15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 XIRP2A4UGR9 3374 aa15.32■□□□□ 0.04
SCAMP4-212ENST00000590266 FRMD3A2A2Y4 597 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 OGTO15294 1046 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 PRPF6O94906 941 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 GLP2RO95838 553 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 CLTAP09496 248 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 LTBRP36941 435 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 CLCNKBP51801 687 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 NDUFA8P51970 172 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 PPP2R3AQ06190 1150 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 CUL4BQ13620 913 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 PTPN14Q15678 1187 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 NAB2Q15742 525 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 CTC1Q2NKJ3 1217 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 SLC10A6Q3KNW5 377 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 LEXMQ3ZCV2 418 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 PTCRAQ6ISU1 281 aaPredicted RBP15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 CEP57Q86XR8 500 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 GLIS3Q8NEA6 775 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 VN1R2Q8NFZ6 395 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 POMGNT1Q8WZA1 660 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 C18orf25Q96B23 403 aaPredicted RBP15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 HVCN1Q96D96 273 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 ZMAT2Q96NC0 199 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 C7orf25Q9BPX7 421 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 HERC2P3Q9BVR0 1158 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 APOL5Q9BWW9 433 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 GPR62Q9BZJ7 368 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 RPF1Q9H9Y2 349 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 MRPL17Q9NRX2 175 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 SLC38A7Q9NVC3 462 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 CNTN3Q9P232 1028 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 STK39Q9UEW8 545 aa15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 SPTBN5Q9NRC6 3674 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-212ENST00000590266 A0A0B4J269 797 aa15.3■□□□□ 0.04
SCAMP4-212ENST00000590266 GOLGA6L4A6NEF3 574 aa15.3■□□□□ 0.04
SCAMP4-212ENST00000590266 SPDYE4A6NLX3 237 aa15.3■□□□□ 0.04
SCAMP4-212ENST00000590266 MEFVO15553 781 aaPredicted RBP15.3■□□□□ 0.04
SCAMP4-212ENST00000590266 ACTN4O43707 911 aaKnown RBP15.3■□□□□ 0.04
SCAMP4-212ENST00000590266 CLASP2O75122 1294 aaKnown RBP15.3■□□□□ 0.04
SCAMP4-212ENST00000590266 SF3B1O75533 1304 aaKnown RBP eCLIP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms