RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 SNTG2Q9NY99 539 aa15.39■□□□□ 0.05
SF3A2-205ENST00000590034 LRRN2O75325 713 aa15.38■□□□□ 0.05
SF3A2-205ENST00000590034 C8AP07357 584 aa15.38■□□□□ 0.05
SF3A2-205ENST00000590034 ID4P47928 161 aa15.38■□□□□ 0.05
SF3A2-205ENST00000590034 PSMD5Q16401 504 aa15.38■□□□□ 0.05
SF3A2-205ENST00000590034 EEF1DP3Q658K8 133 aa15.38■□□□□ 0.05
SF3A2-205ENST00000590034 DCLRE1AQ6PJP8 1040 aa15.38■□□□□ 0.05
SF3A2-205ENST00000590034 CEP57Q86XR8 500 aa15.38■□□□□ 0.05
SF3A2-205ENST00000590034 MCPH1Q8NEM0 835 aa15.38■□□□□ 0.05
SF3A2-205ENST00000590034 CCDC113Q9H0I3 377 aa15.38■□□□□ 0.05
SF3A2-205ENST00000590034 CDH7Q9ULB5 785 aa15.38■□□□□ 0.05
SF3A2-205ENST00000590034 SIT1Q9Y3P8 196 aa15.38■□□□□ 0.05
SF3A2-205ENST00000590034 CCL16O15467 120 aa15.37■□□□□ 0.05
SF3A2-205ENST00000590034 THP07101 528 aa15.37■□□□□ 0.05
SF3A2-205ENST00000590034 ATP2B1P20020 1258 aa15.37■□□□□ 0.05
SF3A2-205ENST00000590034 ANAPC15P60006 121 aa15.37■□□□□ 0.05
SF3A2-205ENST00000590034 GPC5P78333 572 aa15.37■□□□□ 0.05
SF3A2-205ENST00000590034 ANKRD1Q15327 319 aa15.37■□□□□ 0.05
SF3A2-205ENST00000590034 NOSTRINQ8IVI9 506 aa15.37■□□□□ 0.05
SF3A2-205ENST00000590034 ZBTB8OSQ8IWT0 167 aa15.37■□□□□ 0.05
SF3A2-205ENST00000590034 PJA1Q8NG27 643 aa15.37■□□□□ 0.05
SF3A2-205ENST00000590034 ITFG1Q8TB96 612 aa15.37■□□□□ 0.05
SF3A2-205ENST00000590034 FGF13Q92913 245 aa15.37■□□□□ 0.05
SF3A2-205ENST00000590034 KIFC3Q9BVG8 833 aa15.37■□□□□ 0.05
SF3A2-205ENST00000590034 N4BP3O15049 544 aa15.36■□□□□ 0.05
SF3A2-205ENST00000590034 LMNAP02545 664 aaKnown RBP15.36■□□□□ 0.05
SF3A2-205ENST00000590034 PRKCBP05771 671 aa15.36■□□□□ 0.05
SF3A2-205ENST00000590034 HNRNPA1P09651 372 aaKnown RBP eCLIP15.36■□□□□ 0.05
SF3A2-205ENST00000590034 SP9P0CG40 484 aa15.36■□□□□ 0.05
SF3A2-205ENST00000590034 MCM7P33993 719 aa15.36■□□□□ 0.05
SF3A2-205ENST00000590034 STARD6P59095 220 aa15.36■□□□□ 0.05
SF3A2-205ENST00000590034 PRPF4BQ13523 1007 aaKnown RBP15.36■□□□□ 0.05
SF3A2-205ENST00000590034 PPM1LQ5SGD2 360 aa15.36■□□□□ 0.05
SF3A2-205ENST00000590034 LIN9Q5TKA1 542 aa15.36■□□□□ 0.05
SF3A2-205ENST00000590034 CD300LGQ6UXG3 332 aa15.36■□□□□ 0.05
SF3A2-205ENST00000590034 RSPO2Q6UXX9 243 aaPredicted RBP15.36■□□□□ 0.05
SF3A2-205ENST00000590034 ERMP1Q7Z2K6 904 aa15.36■□□□□ 0.05
SF3A2-205ENST00000590034 C1orf210Q8IVY1 113 aa15.36■□□□□ 0.05
SF3A2-205ENST00000590034 MAML2Q8IZL2 1156 aaPredicted RBP15.36■□□□□ 0.05
SF3A2-205ENST00000590034 SLC7A14Q8TBB6 771 aa15.36■□□□□ 0.05
SF3A2-205ENST00000590034 POLD4Q9HCU8 107 aa15.36■□□□□ 0.05
SF3A2-205ENST00000590034 TUFT1Q9NNX1 390 aa15.36■□□□□ 0.05
SF3A2-205ENST00000590034 HCFC1R1Q9NWW0 138 aa15.36■□□□□ 0.05
SF3A2-205ENST00000590034 ZFP37Q9Y6Q3 630 aaPredicted RBP15.36■□□□□ 0.05
SF3A2-205ENST00000590034 ACKR2O00590 384 aa15.35■□□□□ 0.05
SF3A2-205ENST00000590034 LIG1P18858 919 aa15.35■□□□□ 0.05
SF3A2-205ENST00000590034 HOXA9P31269 272 aa15.35■□□□□ 0.05
SF3A2-205ENST00000590034 SNW1Q13573 536 aaKnown RBP15.35■□□□□ 0.05
SF3A2-205ENST00000590034 MAPK6Q16659 721 aa15.35■□□□□ 0.05
SF3A2-205ENST00000590034 GLRA4Q5JXX5 417 aa15.35■□□□□ 0.05
SF3A2-205ENST00000590034 POTEHQ6S545 545 aa15.35■□□□□ 0.05
SF3A2-205ENST00000590034 PADI6Q6TGC4 694 aa15.35■□□□□ 0.05
SF3A2-205ENST00000590034 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.35■□□□□ 0.05
SF3A2-205ENST00000590034 KCNG4Q8TDN1 519 aa15.35■□□□□ 0.05
SF3A2-205ENST00000590034 POLR3CQ9BUI4 534 aaPredicted RBP15.35■□□□□ 0.05
SF3A2-205ENST00000590034 C2orf40Q9H1Z8 148 aa15.35■□□□□ 0.05
SF3A2-205ENST00000590034 SEMA4AQ9H3S1 761 aa15.35■□□□□ 0.05
SF3A2-205ENST00000590034 POLIQ9UNA4 740 aa15.35■□□□□ 0.05
SF3A2-205ENST00000590034 GDAQ9Y2T3 454 aa15.35■□□□□ 0.05
SF3A2-205ENST00000590034 MTF2Q9Y483 593 aaPredicted RBP15.35■□□□□ 0.05
SF3A2-205ENST00000590034 CYP11B2P19099 503 aa15.34■□□□□ 0.05
SF3A2-205ENST00000590034 FGFR3P22607 806 aa15.34■□□□□ 0.05
SF3A2-205ENST00000590034 OR1D2P34982 312 aa15.34■□□□□ 0.05
SF3A2-205ENST00000590034 NAMPTP43490 491 aa15.34■□□□□ 0.05
SF3A2-205ENST00000590034 GUCY1B3Q02153 619 aa15.34■□□□□ 0.05
SF3A2-205ENST00000590034 RAB33AQ14088 237 aa15.34■□□□□ 0.05
SF3A2-205ENST00000590034 ECM1Q16610 540 aa15.34■□□□□ 0.05
SF3A2-205ENST00000590034 AXDND1Q5T1B0 1012 aaPredicted RBP15.34■□□□□ 0.05
SF3A2-205ENST00000590034 NPAS3Q8IXF0 933 aa15.34■□□□□ 0.05
SF3A2-205ENST00000590034 C3orf58Q8NDZ4 430 aa15.34■□□□□ 0.05
SF3A2-205ENST00000590034 RMDN1Q96DB5 314 aa15.34■□□□□ 0.05
SF3A2-205ENST00000590034 PPP1R10Q96QC0 940 aaKnown RBP15.34■□□□□ 0.05
SF3A2-205ENST00000590034 NACC1Q96RE7 527 aa15.34■□□□□ 0.05
SF3A2-205ENST00000590034 KXD1Q9BQD3 176 aa15.34■□□□□ 0.05
SF3A2-205ENST00000590034 DDX23Q9BUQ8 820 aaKnown RBP15.34■□□□□ 0.05
SF3A2-205ENST00000590034 GOLGA2P5Q9HBQ8 144 aa15.34■□□□□ 0.05
SF3A2-205ENST00000590034 DNMT3BQ9UBC3 853 aaKnown RBP15.34■□□□□ 0.05
SF3A2-205ENST00000590034 MTRRQ9UBK8 725 aa15.34■□□□□ 0.05
SF3A2-205ENST00000590034 NCOR2Q9Y618 2525 aa15.34■□□□□ 0.05
SF3A2-205ENST00000590034 TMEM189-UBE2V1I3L0A0 370 aa15.33■□□□□ 0.04
SF3A2-205ENST00000590034 I3L4J1 428 aa15.33■□□□□ 0.04
SF3A2-205ENST00000590034 POU2F2P09086 479 aa15.33■□□□□ 0.04
SF3A2-205ENST00000590034 RPA1P27694 616 aa15.33■□□□□ 0.04
SF3A2-205ENST00000590034 TKTP29401 623 aaKnown RBP15.33■□□□□ 0.04
SF3A2-205ENST00000590034 CLCNKBP51801 687 aa15.33■□□□□ 0.04
SF3A2-205ENST00000590034 ELAVL2Q12926 359 aaKnown RBP15.33■□□□□ 0.04
SF3A2-205ENST00000590034 MLF2Q15773 248 aaPredicted RBP15.33■□□□□ 0.04
SF3A2-205ENST00000590034 TMEM132AQ24JP5 1023 aa15.33■□□□□ 0.04
SF3A2-205ENST00000590034 SLC5A9Q2M3M2 681 aa15.33■□□□□ 0.04
SF3A2-205ENST00000590034 NT5DC1Q5TFE4 455 aa15.33■□□□□ 0.04
SF3A2-205ENST00000590034 MTSS1LQ765P7 747 aa15.33■□□□□ 0.04
SF3A2-205ENST00000590034 KIAA2013Q8IYS2 634 aa15.33■□□□□ 0.04
SF3A2-205ENST00000590034 DEPTORQ8TB45 409 aa15.33■□□□□ 0.04
SF3A2-205ENST00000590034 ING5Q8WYH8 240 aa15.33■□□□□ 0.04
SF3A2-205ENST00000590034 DDX27Q96GQ7 796 aaKnown RBP15.33■□□□□ 0.04
SF3A2-205ENST00000590034 ADPGKQ9BRR6 497 aa15.33■□□□□ 0.04
SF3A2-205ENST00000590034 CDY1Q9Y6F8 540 aa15.33■□□□□ 0.04
SF3A2-205ENST00000590034 CITO14578 2027 aa15.33■□□□□ 0.04
SF3A2-205ENST00000590034 F5P12259 2224 aa15.32■□□□□ 0.04
SF3A2-205ENST00000590034 KANSL1LA0AUZ9 987 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms