RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 IER5LQ5T953 404 aa15.77■□□□□ 0.12
MBD1-220ENST00000589758 ARL6IP4Q66PJ3 421 aaKnown RBP15.77■□□□□ 0.12
MBD1-220ENST00000589758 DCLRE1AQ6PJP8 1040 aa15.77■□□□□ 0.12
MBD1-220ENST00000589758 SPATA31D4Q6ZUB0 917 aa15.77■□□□□ 0.12
MBD1-220ENST00000589758 C1orf186Q6ZWK4 172 aa15.77■□□□□ 0.12
MBD1-220ENST00000589758 ALYREFQ86V81 257 aaKnown RBP15.77■□□□□ 0.12
MBD1-220ENST00000589758 CEP57Q86XR8 500 aa15.77■□□□□ 0.12
MBD1-220ENST00000589758 DAW1Q8N136 415 aa15.77■□□□□ 0.12
MBD1-220ENST00000589758 FEZF2Q8TBJ5 459 aa15.77■□□□□ 0.12
MBD1-220ENST00000589758 HASPINQ8TF76 798 aa15.77■□□□□ 0.12
MBD1-220ENST00000589758 PIK3R5Q8WYR1 880 aa15.77■□□□□ 0.12
MBD1-220ENST00000589758 SMG7Q92540 1137 aaKnown RBP15.77■□□□□ 0.12
MBD1-220ENST00000589758 ACO2Q99798 780 aaKnown RBP15.77■□□□□ 0.12
MBD1-220ENST00000589758 MMTAG2Q9BU76 263 aaKnown RBP15.77■□□□□ 0.12
MBD1-220ENST00000589758 CCDC94Q9BW85 323 aaPredicted RBP15.77■□□□□ 0.12
MBD1-220ENST00000589758 MRPL4Q9BYD3 311 aaKnown RBP15.77■□□□□ 0.12
MBD1-220ENST00000589758 IRF2BPLQ9H1B7 796 aa15.77■□□□□ 0.12
MBD1-220ENST00000589758 PIDD1Q9HB75 910 aa15.77■□□□□ 0.12
MBD1-220ENST00000589758 TOPORSQ9NS56 1045 aaPredicted RBP15.77■□□□□ 0.12
MBD1-220ENST00000589758 ARHGAP28Q9P2N2 729 aa15.77■□□□□ 0.12
MBD1-220ENST00000589758 MUC6Q6W4X9 2439 aa15.77■□□□□ 0.11
MBD1-220ENST00000589758 KMT2EQ8IZD2 1858 aa15.76■□□□□ 0.11
MBD1-220ENST00000589758 CLUHO75153 1309 aa15.76■□□□□ 0.11
MBD1-220ENST00000589758 TMEM189-UBE2V1I3L0A0 370 aa15.76■□□□□ 0.11
MBD1-220ENST00000589758 RFPL2O75678 378 aa15.76■□□□□ 0.11
MBD1-220ENST00000589758 RPL17P18621 184 aaKnown RBP15.76■□□□□ 0.11
MBD1-220ENST00000589758 GUCY2CP25092 1073 aa15.76■□□□□ 0.11
MBD1-220ENST00000589758 GRM5P41594 1212 aa15.76■□□□□ 0.11
MBD1-220ENST00000589758 TDGQ13569 410 aa15.76■□□□□ 0.11
MBD1-220ENST00000589758 ZNF568Q3ZCX4 644 aa15.76■□□□□ 0.11
MBD1-220ENST00000589758 PRSS55Q6UWB4 352 aaPredicted RBP15.76■□□□□ 0.11
MBD1-220ENST00000589758 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.76■□□□□ 0.11
MBD1-220ENST00000589758 GLYCTKQ8IVS8 523 aa15.76■□□□□ 0.11
MBD1-220ENST00000589758 SYT2Q8N9I0 419 aaPredicted RBP15.76■□□□□ 0.11
MBD1-220ENST00000589758 PRSS33Q8NF86 280 aa15.76■□□□□ 0.11
MBD1-220ENST00000589758 CDK5RAP3Q96JB5 506 aa15.76■□□□□ 0.11
MBD1-220ENST00000589758 PPP1R10Q96QC0 940 aaKnown RBP15.76■□□□□ 0.11
MBD1-220ENST00000589758 NTPCRQ9BSD7 190 aaKnown RBP15.76■□□□□ 0.11
MBD1-220ENST00000589758 RUSC1Q9BVN2 902 aa15.76■□□□□ 0.11
MBD1-220ENST00000589758 PRKD2Q9BZL6 878 aa15.76■□□□□ 0.11
MBD1-220ENST00000589758 CDT1Q9H211 546 aa15.76■□□□□ 0.11
MBD1-220ENST00000589758 KCNK12Q9HB15 430 aa15.76■□□□□ 0.11
MBD1-220ENST00000589758 PTPRHQ9HD43 1115 aa15.76■□□□□ 0.11
MBD1-220ENST00000589758 KCND2Q9NZV8 630 aa15.76■□□□□ 0.11
MBD1-220ENST00000589758 SLC26A4O43511 780 aa15.75■□□□□ 0.11
MBD1-220ENST00000589758 TRAPPC3O43617 180 aa15.75■□□□□ 0.11
MBD1-220ENST00000589758 ZMYND10O75800 440 aa15.75■□□□□ 0.11
MBD1-220ENST00000589758 B3GAT3O94766 335 aa15.75■□□□□ 0.11
MBD1-220ENST00000589758 MYBP10242 640 aa15.75■□□□□ 0.11
MBD1-220ENST00000589758 GBP2P32456 591 aaPredicted RBP15.75■□□□□ 0.11
MBD1-220ENST00000589758 MRE11P49959 708 aa15.75■□□□□ 0.11
MBD1-220ENST00000589758 SMTNP53814 917 aa15.75■□□□□ 0.11
MBD1-220ENST00000589758 VCPP55072 806 aaKnown RBP15.75■□□□□ 0.11
MBD1-220ENST00000589758 STRN3Q13033 797 aa15.75■□□□□ 0.11
MBD1-220ENST00000589758 MAPK7Q13164 816 aa15.75■□□□□ 0.11
MBD1-220ENST00000589758 CUL4AQ13619 759 aa15.75■□□□□ 0.11
MBD1-220ENST00000589758 ZRSR1Q15695 479 aaKnown RBP15.75■□□□□ 0.11
MBD1-220ENST00000589758 PSMD5Q16401 504 aa15.75■□□□□ 0.11
MBD1-220ENST00000589758 KCNK18Q7Z418 384 aa15.75■□□□□ 0.11
MBD1-220ENST00000589758 HSCBQ8IWL3 235 aa15.75■□□□□ 0.11
MBD1-220ENST00000589758 LNX1Q8TBB1 728 aaPredicted RBP15.75■□□□□ 0.11
MBD1-220ENST00000589758 SPIRE2Q8WWL2 714 aa15.75■□□□□ 0.11
MBD1-220ENST00000589758 NXPE3Q969Y0 559 aa15.75■□□□□ 0.11
MBD1-220ENST00000589758 ZNF707Q96C28 371 aaPredicted RBP15.75■□□□□ 0.11
MBD1-220ENST00000589758 AK8Q96MA6 479 aa15.75■□□□□ 0.11
MBD1-220ENST00000589758 CLSTN3Q9BQT9 956 aa15.75■□□□□ 0.11
MBD1-220ENST00000589758 TCHPQ9BT92 498 aa15.75■□□□□ 0.11
MBD1-220ENST00000589758 CXCL16Q9H2A7 254 aa15.75■□□□□ 0.11
MBD1-220ENST00000589758 SMOC2Q9H3U7 446 aa15.75■□□□□ 0.11
MBD1-220ENST00000589758 SLC38A7Q9NVC3 462 aa15.75■□□□□ 0.11
MBD1-220ENST00000589758 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.75■□□□□ 0.11
MBD1-220ENST00000589758 EPS15L1Q9UBC2 864 aa15.75■□□□□ 0.11
MBD1-220ENST00000589758 FBXW11Q9UKB1 542 aa15.75■□□□□ 0.11
MBD1-220ENST00000589758 SMIM28A0A1B0GU29 152 aa15.74■□□□□ 0.11
MBD1-220ENST00000589758 VWA3AA6NCI4 1184 aa15.74■□□□□ 0.11
MBD1-220ENST00000589758 PDGFBP01127 241 aaPredicted RBP15.74■□□□□ 0.11
MBD1-220ENST00000589758 MCF2P10911 925 aa15.74■□□□□ 0.11
MBD1-220ENST00000589758 FGFR3P22607 806 aa15.74■□□□□ 0.11
MBD1-220ENST00000589758 UPP1Q16831 310 aa15.74■□□□□ 0.11
MBD1-220ENST00000589758 XKR4Q5GH76 650 aa15.74■□□□□ 0.11
MBD1-220ENST00000589758 GLRA4Q5JXX5 417 aa15.74■□□□□ 0.11
MBD1-220ENST00000589758 LARP1BQ659C4 914 aaKnown RBP15.74■□□□□ 0.11
MBD1-220ENST00000589758 MPZL3Q6UWV2 235 aa15.74■□□□□ 0.11
MBD1-220ENST00000589758 ALKAL1Q6UXT8 129 aa15.74■□□□□ 0.11
MBD1-220ENST00000589758 TAS1R3Q7RTX0 852 aa15.74■□□□□ 0.11
MBD1-220ENST00000589758 SNX21Q969T3 373 aa15.74■□□□□ 0.11
MBD1-220ENST00000589758 DDX27Q96GQ7 796 aaKnown RBP15.74■□□□□ 0.11
MBD1-220ENST00000589758 ACAP3Q96P50 834 aa15.74■□□□□ 0.11
MBD1-220ENST00000589758 PNMA5Q96PV4 448 aa15.74■□□□□ 0.11
MBD1-220ENST00000589758 MFSD1Q9H3U5 465 aa15.74■□□□□ 0.11
MBD1-220ENST00000589758 DUSP12Q9UNI6 340 aa15.74■□□□□ 0.11
MBD1-220ENST00000589758 SFI1A8K8P3 1242 aa15.73■□□□□ 0.11
MBD1-220ENST00000589758 H0YCG3 227 aa15.73■□□□□ 0.11
MBD1-220ENST00000589758 SLC16A4O15374 487 aa15.73■□□□□ 0.11
MBD1-220ENST00000589758 BMP15O95972 392 aa15.73■□□□□ 0.11
MBD1-220ENST00000589758 HNRNPA1P09651 372 aaKnown RBP eCLIP15.73■□□□□ 0.11
MBD1-220ENST00000589758 PLS3P13797 630 aa15.73■□□□□ 0.11
MBD1-220ENST00000589758 PROZP22891 400 aa15.73■□□□□ 0.11
MBD1-220ENST00000589758 CLCN5P51795 746 aa15.73■□□□□ 0.11
MBD1-220ENST00000589758 CLCNKBP51801 687 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms