RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 WDFY4Q6ZS81 3184 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 CCDC169A6NNP5 214 aa13.43□□□□□ -0.26
VAT1-206ENST00000589709 PP2D1A8MPX8 630 aa13.43□□□□□ -0.26
VAT1-206ENST00000589709 TMEM189-UBE2V1I3L0A0 370 aa13.43□□□□□ -0.26
VAT1-206ENST00000589709 ZMYND10O75800 440 aa13.43□□□□□ -0.26
VAT1-206ENST00000589709 SPATA31D3P0C874 917 aa13.43□□□□□ -0.26
VAT1-206ENST00000589709 RPL17P18621 184 aaKnown RBP13.43□□□□□ -0.26
VAT1-206ENST00000589709 GUCY2CP25092 1073 aa13.43□□□□□ -0.26
VAT1-206ENST00000589709 MCM2P49736 904 aa13.43□□□□□ -0.26
VAT1-206ENST00000589709 PEX3P56589 373 aa13.43□□□□□ -0.26
VAT1-206ENST00000589709 ATP2C1P98194 919 aaPredicted RBP13.43□□□□□ -0.26
VAT1-206ENST00000589709 MAPK7Q13164 816 aa13.43□□□□□ -0.26
VAT1-206ENST00000589709 DMP1Q13316 513 aaPredicted RBP13.43□□□□□ -0.26
VAT1-206ENST00000589709 XKR4Q5GH76 650 aa13.43□□□□□ -0.26
VAT1-206ENST00000589709 HYIQ5T013 277 aa13.43□□□□□ -0.26
VAT1-206ENST00000589709 MCTP1Q6DN14 999 aa13.43□□□□□ -0.26
VAT1-206ENST00000589709 DCLRE1AQ6PJP8 1040 aa13.43□□□□□ -0.26
VAT1-206ENST00000589709 PRSS55Q6UWB4 352 aaPredicted RBP13.43□□□□□ -0.26
VAT1-206ENST00000589709 SPATA31D4Q6ZUB0 917 aa13.43□□□□□ -0.26
VAT1-206ENST00000589709 NXPE3Q969Y0 559 aa13.43□□□□□ -0.26
VAT1-206ENST00000589709 UROC1Q96N76 676 aa13.43□□□□□ -0.26
VAT1-206ENST00000589709 PPP1R10Q96QC0 940 aaKnown RBP13.43□□□□□ -0.26
VAT1-206ENST00000589709 ACO2Q99798 780 aaKnown RBP13.43□□□□□ -0.26
VAT1-206ENST00000589709 CLSTN3Q9BQT9 956 aa13.43□□□□□ -0.26
VAT1-206ENST00000589709 SMOC2Q9H3U7 446 aa13.43□□□□□ -0.26
VAT1-206ENST00000589709 KCNK12Q9HB15 430 aa13.43□□□□□ -0.26
VAT1-206ENST00000589709 ARHGAP28Q9P2N2 729 aa13.43□□□□□ -0.26
VAT1-206ENST00000589709 GDAQ9Y2T3 454 aa13.43□□□□□ -0.26
VAT1-206ENST00000589709 CLUHO75153 1309 aa13.42□□□□□ -0.26
VAT1-206ENST00000589709 N4BP1O75113 896 aaKnown RBP13.42□□□□□ -0.26
VAT1-206ENST00000589709 HIP1RO75146 1068 aa13.42□□□□□ -0.26
VAT1-206ENST00000589709 FGFR3P22607 806 aa13.42□□□□□ -0.26
VAT1-206ENST00000589709 CDC25AP30304 524 aa13.42□□□□□ -0.26
VAT1-206ENST00000589709 GRM5P41594 1212 aa13.42□□□□□ -0.26
VAT1-206ENST00000589709 CLCN5P51795 746 aa13.42□□□□□ -0.26
VAT1-206ENST00000589709 PSMD5Q16401 504 aa13.42□□□□□ -0.26
VAT1-206ENST00000589709 ARL6IP4Q66PJ3 421 aaKnown RBP13.42□□□□□ -0.26
VAT1-206ENST00000589709 ALKAL1Q6UXT8 129 aa13.42□□□□□ -0.26
VAT1-206ENST00000589709 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.42□□□□□ -0.26
VAT1-206ENST00000589709 KCNK18Q7Z418 384 aa13.42□□□□□ -0.26
VAT1-206ENST00000589709 SPIRE2Q8WWL2 714 aa13.42□□□□□ -0.26
VAT1-206ENST00000589709 RUSC1Q9BVN2 902 aa13.42□□□□□ -0.26
VAT1-206ENST00000589709 CCDC94Q9BW85 323 aaPredicted RBP13.42□□□□□ -0.26
VAT1-206ENST00000589709 MRPL4Q9BYD3 311 aaKnown RBP13.42□□□□□ -0.26
VAT1-206ENST00000589709 PIDD1Q9HB75 910 aa13.42□□□□□ -0.26
VAT1-206ENST00000589709 KMT5AQ9NQR1 393 aa13.42□□□□□ -0.26
VAT1-206ENST00000589709 TOPORSQ9NS56 1045 aaPredicted RBP13.42□□□□□ -0.26
VAT1-206ENST00000589709 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.42□□□□□ -0.26
VAT1-206ENST00000589709 FBXW11Q9UKB1 542 aa13.42□□□□□ -0.26
VAT1-206ENST00000589709 DUSP12Q9UNI6 340 aa13.42□□□□□ -0.26
VAT1-206ENST00000589709 SMIM28A0A1B0GU29 152 aa13.41□□□□□ -0.26
VAT1-206ENST00000589709 SLC26A4O43511 780 aa13.41□□□□□ -0.26
VAT1-206ENST00000589709 B3GAT3O94766 335 aa13.41□□□□□ -0.26
VAT1-206ENST00000589709 HNRNPA1P09651 372 aaKnown RBP eCLIP13.41□□□□□ -0.26
VAT1-206ENST00000589709 MYBP10242 640 aa13.41□□□□□ -0.26
VAT1-206ENST00000589709 MCF2P10911 925 aa13.41□□□□□ -0.26
VAT1-206ENST00000589709 PROZP22891 400 aa13.41□□□□□ -0.26
VAT1-206ENST00000589709 GJB2P29033 226 aa13.41□□□□□ -0.26
VAT1-206ENST00000589709 GBP2P32456 591 aaPredicted RBP13.41□□□□□ -0.26
VAT1-206ENST00000589709 YARSP54577 528 aaKnown RBP13.41□□□□□ -0.26
VAT1-206ENST00000589709 RAB33AQ14088 237 aa13.41□□□□□ -0.26
VAT1-206ENST00000589709 UPP1Q16831 310 aa13.41□□□□□ -0.26
VAT1-206ENST00000589709 ASTLQ6HA08 431 aaPredicted RBP13.41□□□□□ -0.26
VAT1-206ENST00000589709 CD300LGQ6UXG3 332 aa13.41□□□□□ -0.26
VAT1-206ENST00000589709 RTL10Q7L3V2 364 aa13.41□□□□□ -0.26
VAT1-206ENST00000589709 TAS1R3Q7RTX0 852 aa13.41□□□□□ -0.26
VAT1-206ENST00000589709 CEP57Q86XR8 500 aa13.41□□□□□ -0.26
VAT1-206ENST00000589709 GLYCTKQ8IVS8 523 aa13.41□□□□□ -0.26
VAT1-206ENST00000589709 SYT2Q8N9I0 419 aaPredicted RBP13.41□□□□□ -0.26
VAT1-206ENST00000589709 HASPINQ8TF76 798 aa13.41□□□□□ -0.26
VAT1-206ENST00000589709 DDX27Q96GQ7 796 aaKnown RBP13.41□□□□□ -0.26
VAT1-206ENST00000589709 PNMA5Q96PV4 448 aa13.41□□□□□ -0.26
VAT1-206ENST00000589709 TARS2Q9BW92 718 aaKnown RBP13.41□□□□□ -0.26
VAT1-206ENST00000589709 CDT1Q9H211 546 aa13.41□□□□□ -0.26
VAT1-206ENST00000589709 UPF2Q9HAU5 1272 aaKnown RBP13.41□□□□□ -0.26
VAT1-206ENST00000589709 SLC38A7Q9NVC3 462 aa13.41□□□□□ -0.26
VAT1-206ENST00000589709 KCND2Q9NZV8 630 aa13.41□□□□□ -0.26
VAT1-206ENST00000589709 ZFP37Q9Y6Q3 630 aaPredicted RBP13.41□□□□□ -0.26
VAT1-206ENST00000589709 PLXNA3P51805 1871 aa13.41□□□□□ -0.26
VAT1-206ENST00000589709 KMT2EQ8IZD2 1858 aa13.41□□□□□ -0.26
VAT1-206ENST00000589709 MTCL1Q9Y4B5 1905 aaKnown RBP13.41□□□□□ -0.26
VAT1-206ENST00000589709 C2orf16Q68DN1 1984 aa13.4□□□□□ -0.26
VAT1-206ENST00000589709 H3BQV1 296 aa13.4□□□□□ -0.26
VAT1-206ENST00000589709 ABLIM1O14639 778 aa13.4□□□□□ -0.26
VAT1-206ENST00000589709 GALR2O43603 387 aaPredicted RBP13.4□□□□□ -0.26
VAT1-206ENST00000589709 TRAPPC3O43617 180 aa13.4□□□□□ -0.26
VAT1-206ENST00000589709 POU2F2P09086 479 aa13.4□□□□□ -0.26
VAT1-206ENST00000589709 LAMP2P13473 410 aa13.4□□□□□ -0.26
VAT1-206ENST00000589709 KCNE1P15382 129 aa13.4□□□□□ -0.26
VAT1-206ENST00000589709 HOXA9P31269 272 aa13.4□□□□□ -0.26
VAT1-206ENST00000589709 CLCNKBP51801 687 aa13.4□□□□□ -0.26
VAT1-206ENST00000589709 UVSSAQ2YD98 709 aa13.4□□□□□ -0.26
VAT1-206ENST00000589709 ZNF568Q3ZCX4 644 aa13.4□□□□□ -0.26
VAT1-206ENST00000589709 GLRA4Q5JXX5 417 aa13.4□□□□□ -0.26
VAT1-206ENST00000589709 LIN9Q5TKA1 542 aa13.4□□□□□ -0.26
VAT1-206ENST00000589709 TMEM105Q8N8V8 129 aa13.4□□□□□ -0.26
VAT1-206ENST00000589709 CEP120Q8N960 986 aa13.4□□□□□ -0.26
VAT1-206ENST00000589709 KCNN1Q92952 543 aa13.4□□□□□ -0.26
VAT1-206ENST00000589709 MYADMQ96S97 322 aa13.4□□□□□ -0.26
VAT1-206ENST00000589709 MTRRQ9UBK8 725 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms