RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 TCEAL4Q96EI5 215 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 RRP36Q96EU6 259 aaKnown RBP6.85□□□□□ -1.31
VPS25-204ENST00000589577 ZFP42Q96MM3 310 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 ZSWIM3Q96MP5 696 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 ASB16Q96NS5 453 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 MKNK1Q9BUB5 465 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 GCOM2Q9BZD3 368 aaPredicted RBP6.85□□□□□ -1.31
VPS25-204ENST00000589577 KRT23Q9C075 422 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 OSBPL3Q9H4L5 887 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 TMEM9BQ9NQ34 198 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 SCUBE2Q9NQ36 999 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 AVENQ9NQS1 362 aaPredicted RBP6.85□□□□□ -1.31
VPS25-204ENST00000589577 DIAPH3Q9NSV4 1193 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 POLR3BQ9NW08 1133 aaPredicted RBP6.85□□□□□ -1.31
VPS25-204ENST00000589577 GABBR1Q9UBS5 961 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 ADAM28Q9UKQ2 775 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 RAXQ9Y2V3 346 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 RAI2Q9Y5P3 530 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 MUC22E2RYF6 1773 aaPredicted RBP6.85□□□□□ -1.31
VPS25-204ENST00000589577 PCDH15Q96QU1 1955 aa6.84□□□□□ -1.31
VPS25-204ENST00000589577 hCG_1642624A0A1W2PR95 340 aa6.84□□□□□ -1.31
VPS25-204ENST00000589577 TMEM150BA6NC51 233 aa6.84□□□□□ -1.31
VPS25-204ENST00000589577 SLC38A8A6NNN8 435 aa6.84□□□□□ -1.31
VPS25-204ENST00000589577 DCLK1O15075 740 aa6.84□□□□□ -1.31
VPS25-204ENST00000589577 PLEKHA8P1O95397 391 aa6.84□□□□□ -1.31
VPS25-204ENST00000589577 SEC24BO95487 1268 aa6.84□□□□□ -1.31
VPS25-204ENST00000589577 OATP04181 439 aa6.84□□□□□ -1.31
VPS25-204ENST00000589577 PSMC3P17980 439 aa6.84□□□□□ -1.31
VPS25-204ENST00000589577 VIPR2P41587 438 aa6.84□□□□□ -1.31
VPS25-204ENST00000589577 SCNN1GP51170 649 aa6.84□□□□□ -1.31
VPS25-204ENST00000589577 MFAP1P55081 439 aaKnown RBP6.84□□□□□ -1.31
VPS25-204ENST00000589577 MLLT6P55198 1093 aaPredicted RBP6.84□□□□□ -1.31
VPS25-204ENST00000589577 SIM1P81133 766 aaPredicted RBP6.84□□□□□ -1.31
VPS25-204ENST00000589577 PRKCEQ02156 737 aa6.84□□□□□ -1.31
VPS25-204ENST00000589577 CREMQ03060 361 aa6.84□□□□□ -1.31
VPS25-204ENST00000589577 CATSPER4Q7RTX7 472 aa6.84□□□□□ -1.31
VPS25-204ENST00000589577 TICAM2Q86XR7 235 aa6.84□□□□□ -1.31
VPS25-204ENST00000589577 KSR1Q8IVT5 923 aa6.84□□□□□ -1.31
VPS25-204ENST00000589577 MDM1Q8TC05 714 aa6.84□□□□□ -1.31
VPS25-204ENST00000589577 PIK3R5Q8WYR1 880 aa6.84□□□□□ -1.31
VPS25-204ENST00000589577 GAD1Q99259 594 aa6.84□□□□□ -1.31
VPS25-204ENST00000589577 PAAF1Q9BRP4 392 aa6.84□□□□□ -1.31
VPS25-204ENST00000589577 CNNM2Q9H8M5 875 aa6.84□□□□□ -1.31
VPS25-204ENST00000589577 MINDY3Q9H8M7 445 aa6.84□□□□□ -1.31
VPS25-204ENST00000589577 UPF2Q9HAU5 1272 aaKnown RBP6.84□□□□□ -1.31
VPS25-204ENST00000589577 IFT122Q9HBG6 1241 aa6.84□□□□□ -1.31
VPS25-204ENST00000589577 ZFP14Q9HCL3 533 aa6.84□□□□□ -1.31
VPS25-204ENST00000589577 PTPRQQ9UMZ3 2332 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 IGKV6-21A0A0C4DH24 114 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 WDR27A2RRH5 827 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 MYBPHLA2RUH7 354 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 SPECC1L-ADORA2AF8WAN1 911 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 IPO5O00410 1097 aaKnown RBP6.83□□□□□ -1.32
VPS25-204ENST00000589577 MEFVO15553 781 aaPredicted RBP6.83□□□□□ -1.32
VPS25-204ENST00000589577 CDC45O75419 566 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 MOSPD3O75425 235 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 CTHP32929 405 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 SREBF1P36956 1147 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 IRX4P78413 519 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 PSMD5Q16401 504 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 UAP1L1Q3KQV9 507 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 DGKKQ5KSL6 1271 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 TYW1BQ6NUM6 668 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 ZNF746Q6NUN9 644 aaPredicted RBP6.83□□□□□ -1.32
VPS25-204ENST00000589577 NIPA1Q7RTP0 329 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 ZNF410Q86VK4 478 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 CMTR1Q8N1G2 835 aaKnown RBP6.83□□□□□ -1.32
VPS25-204ENST00000589577 ZNF843Q8N446 348 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 SRBD1Q8N5C6 995 aaKnown RBP6.83□□□□□ -1.32
VPS25-204ENST00000589577 HASPINQ8TF76 798 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 CRYGNQ8WXF5 182 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 SLC39A7Q92504 469 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 FAM167AQ96KS9 214 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 SH2D3AQ9BRG2 576 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 COLEC11Q9BWP8 271 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 EIF2AQ9BY44 585 aaKnown RBP6.83□□□□□ -1.32
VPS25-204ENST00000589577 ANO3Q9BYT9 981 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 SEC63Q9UGP8 760 aaKnown RBP6.83□□□□□ -1.32
VPS25-204ENST00000589577 HES2Q9Y543 173 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 IPPQ9Y573 584 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 PCDHA10Q9Y5I2 948 aa6.83□□□□□ -1.32
VPS25-204ENST00000589577 UBR5O95071 2799 aaPredicted RBP6.83□□□□□ -1.32
VPS25-204ENST00000589577 COL6A6A6NMZ7 2263 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 CCDC194A0A1B0GVG4 234 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 TK2O00142 265 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 IFIT3O14879 490 aaKnown RBP6.82□□□□□ -1.32
VPS25-204ENST00000589577 ZNF263O14978 683 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 KHNYNO15037 678 aaKnown RBP6.82□□□□□ -1.32
VPS25-204ENST00000589577 STBD1O95210 358 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 KIF4AO95239 1232 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 PSAPP07602 524 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 SMARCA1P28370 1054 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 SEMA3BQ13214 749 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 RAB33AQ14088 237 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 PON2Q15165 354 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 IMMTQ16891 758 aaKnown RBP6.82□□□□□ -1.32
VPS25-204ENST00000589577 UVSSAQ2YD98 709 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 PLA2G4DQ86XP0 818 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 RHPN2Q8IUC4 686 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 MFSD6LQ8IWD5 586 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms