RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 RAB30Q15771 203 aa9.37□□□□□ -0.91
DNMT1-219ENST00000589349 WWC2Q6AWC2 1192 aa9.37□□□□□ -0.91
DNMT1-219ENST00000589349 FAM109BQ6ICB4 259 aaPredicted RBP9.37□□□□□ -0.91
DNMT1-219ENST00000589349 C16orf59Q7L2K0 433 aa9.37□□□□□ -0.91
DNMT1-219ENST00000589349 SGMS1Q86VZ5 419 aa9.37□□□□□ -0.91
DNMT1-219ENST00000589349 DTX1Q86Y01 620 aa9.37□□□□□ -0.91
DNMT1-219ENST00000589349 MFSD2AQ8NA29 543 aa9.37□□□□□ -0.91
DNMT1-219ENST00000589349 GIMAP8Q8ND71 665 aaPredicted RBP9.37□□□□□ -0.91
DNMT1-219ENST00000589349 GLG1Q92896 1179 aa9.37□□□□□ -0.91
DNMT1-219ENST00000589349 ATP6V0A1Q93050 837 aa9.37□□□□□ -0.91
DNMT1-219ENST00000589349 UIMC1Q96RL1 719 aa9.37□□□□□ -0.91
DNMT1-219ENST00000589349 CDX2Q99626 313 aaPredicted RBP9.37□□□□□ -0.91
DNMT1-219ENST00000589349 WNT8AQ9H1J5 351 aa9.37□□□□□ -0.91
DNMT1-219ENST00000589349 FBRSQ9HAH7 460 aa9.37□□□□□ -0.91
DNMT1-219ENST00000589349 SLC28A3Q9HAS3 691 aa9.37□□□□□ -0.91
DNMT1-219ENST00000589349 ADAM30Q9UKF2 790 aa9.37□□□□□ -0.91
DNMT1-219ENST00000589349 ZNF215Q9UL58 517 aaPredicted RBP9.37□□□□□ -0.91
DNMT1-219ENST00000589349 SNX14Q9Y5W7 946 aa9.37□□□□□ -0.91
DNMT1-219ENST00000589349 C17orf102A2RUQ5 167 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 KIF28PB7ZC32 967 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 DDX39AO00148 427 aaKnown RBP9.36□□□□□ -0.91
DNMT1-219ENST00000589349 MEIS2O14770 477 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 CPLX1O14810 134 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 PFKMP08237 780 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 IQCF3P0C7M6 154 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 GNAT1P11488 350 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 MARK3P27448 753 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 HSPA4P34932 840 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 MRPS9P82933 396 aaKnown RBP9.36□□□□□ -0.91
DNMT1-219ENST00000589349 EXOSC10Q01780 885 aaKnown RBP9.36□□□□□ -0.91
DNMT1-219ENST00000589349 STK3Q13188 491 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 SLBPQ14493 270 aaKnown RBP eCLIP9.36□□□□□ -0.91
DNMT1-219ENST00000589349 MSMPQ1L6U9 139 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 JAKMIP3Q5VZ66 844 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 XRRA1Q6P2D8 792 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 LRRC8DQ7L1W4 858 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 HERVK_113Q902F9 699 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 KAT2BQ92831 832 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 MRRFQ96E11 262 aaKnown RBP9.36□□□□□ -0.91
DNMT1-219ENST00000589349 CDHR1Q96JP9 859 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 GUCD1Q96NT3 240 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 SDF4Q9BRK5 362 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 SLC26A6Q9BXS9 759 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 NKX2-4Q9H2Z4 354 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 BCAS3Q9H6U6 928 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 TMEM260Q9NX78 707 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 GTF2IRD1Q9UHL9 959 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 CYP46A1Q9Y6A2 500 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 LCTP09848 1927 aa9.36□□□□□ -0.91
DNMT1-219ENST00000589349 LTBP2Q14767 1821 aa9.35□□□□□ -0.91
DNMT1-219ENST00000589349 LRRC37A2A6NM11 1700 aa9.35□□□□□ -0.91
DNMT1-219ENST00000589349 SCAMP3O14828 347 aaKnown RBP9.35□□□□□ -0.91
DNMT1-219ENST00000589349 RECKO95980 971 aa9.35□□□□□ -0.91
DNMT1-219ENST00000589349 LGALS2P05162 132 aa9.35□□□□□ -0.91
DNMT1-219ENST00000589349 SMIM10L2AP0DMW4 78 aa9.35□□□□□ -0.91
DNMT1-219ENST00000589349 SMIM10L2BP0DMW5 78 aa9.35□□□□□ -0.91
DNMT1-219ENST00000589349 GARTP22102 1010 aa9.35□□□□□ -0.91
DNMT1-219ENST00000589349 RPS6KB1P23443 525 aa9.35□□□□□ -0.91
DNMT1-219ENST00000589349 RFC2P35250 354 aa9.35□□□□□ -0.91
DNMT1-219ENST00000589349 IGBP1P78318 339 aa9.35□□□□□ -0.91
DNMT1-219ENST00000589349 FANCCQ00597 558 aa9.35□□□□□ -0.91
DNMT1-219ENST00000589349 GHRHRQ02643 423 aa9.35□□□□□ -0.91
DNMT1-219ENST00000589349 METTL7BQ6UX53 244 aa9.35□□□□□ -0.91
DNMT1-219ENST00000589349 TRMT1LQ7Z2T5 733 aaKnown RBP9.35□□□□□ -0.91
DNMT1-219ENST00000589349 MAFAQ8NHW3 353 aaPredicted RBP9.35□□□□□ -0.91
DNMT1-219ENST00000589349 CAGE1Q8TC20 777 aa9.35□□□□□ -0.91
DNMT1-219ENST00000589349 AFAP1L1Q8TED9 768 aa9.35□□□□□ -0.91
DNMT1-219ENST00000589349 CCDC12Q8WUD4 166 aaPredicted RBP9.35□□□□□ -0.91
DNMT1-219ENST00000589349 PHKBQ93100 1093 aa9.35□□□□□ -0.91
DNMT1-219ENST00000589349 PRDM12Q9H4Q4 367 aa9.35□□□□□ -0.91
DNMT1-219ENST00000589349 AZI2Q9H6S1 392 aa9.35□□□□□ -0.91
DNMT1-219ENST00000589349 C6orf50Q9HD87 102 aa9.35□□□□□ -0.91
DNMT1-219ENST00000589349 SETD4Q9NVD3 440 aa9.35□□□□□ -0.91
DNMT1-219ENST00000589349 RANBP2P49792 3224 aaKnown RBP9.34□□□□□ -0.91
DNMT1-219ENST00000589349 DNAH12Q6ZR08 3092 aa9.34□□□□□ -0.91
DNMT1-219ENST00000589349 F2P00734 622 aa9.34□□□□□ -0.91
DNMT1-219ENST00000589349 CST3P01034 146 aaPredicted RBP9.34□□□□□ -0.91
DNMT1-219ENST00000589349 FOSP01100 380 aaPredicted RBP9.34□□□□□ -0.91
DNMT1-219ENST00000589349 CKBP12277 381 aa9.34□□□□□ -0.91
DNMT1-219ENST00000589349 MYOGP15173 224 aa9.34□□□□□ -0.91
DNMT1-219ENST00000589349 IBSPP21815 317 aaPredicted RBP9.34□□□□□ -0.91
DNMT1-219ENST00000589349 TCF7P36402 384 aaPredicted RBP9.34□□□□□ -0.91
DNMT1-219ENST00000589349 NLRP5P59047 1200 aa9.34□□□□□ -0.91
DNMT1-219ENST00000589349 NKG7Q16617 165 aa9.34□□□□□ -0.91
DNMT1-219ENST00000589349 SLC6A19Q695T7 634 aa9.34□□□□□ -0.91
DNMT1-219ENST00000589349 FBXL19Q6PCT2 694 aa9.34□□□□□ -0.91
DNMT1-219ENST00000589349 CPLX2Q6PUV4 134 aaKnown RBP9.34□□□□□ -0.91
DNMT1-219ENST00000589349 MRPL41Q8IXM3 137 aaKnown RBP9.34□□□□□ -0.91
DNMT1-219ENST00000589349 RNF34Q969K3 372 aa9.34□□□□□ -0.91
DNMT1-219ENST00000589349 INPP4AQ96PE3 977 aaPredicted RBP9.34□□□□□ -0.91
DNMT1-219ENST00000589349 GPR20Q99678 358 aa9.34□□□□□ -0.91
DNMT1-219ENST00000589349 UPF3BQ9BZI7 483 aaKnown RBP9.34□□□□□ -0.91
DNMT1-219ENST00000589349 GLT8D2Q9H1C3 349 aa9.34□□□□□ -0.91
DNMT1-219ENST00000589349 TTYH1Q9H313 450 aaPredicted RBP9.34□□□□□ -0.91
DNMT1-219ENST00000589349 CERS4Q9HA82 394 aa9.34□□□□□ -0.91
DNMT1-219ENST00000589349 NCOA5Q9HCD5 579 aaKnown RBP9.34□□□□□ -0.91
DNMT1-219ENST00000589349 RIC8AQ9NPQ8 531 aa9.34□□□□□ -0.91
DNMT1-219ENST00000589349 PDRG1Q9NUG6 133 aa9.34□□□□□ -0.91
DNMT1-219ENST00000589349 RSPH10B2B2RC85 870 aa9.33□□□□□ -0.92
DNMT1-219ENST00000589349 STXBP3O00186 592 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms