RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 SMYD5Q6GMV2 418 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 EMBQ6PCB8 327 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 KCNV1Q6PIU1 500 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 CCNI2Q6ZMN8 369 aaPredicted RBP10.73□□□□□ -0.69
VPS25-202ENST00000589219 PEX26Q7Z412 305 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 CBWD2Q8IUF1 395 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 ARHGEF19Q8IW93 802 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 FBXL13Q8NEE6 735 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 FAM71BQ8TC56 605 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 PLEKHO2Q8TD55 490 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 ACTRT1Q8TDG2 376 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 AFAP1L1Q8TED9 768 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 PARD3BQ8TEW8 1205 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 DIS3LQ8TF46 1054 aaKnown RBP10.73□□□□□ -0.69
VPS25-202ENST00000589219 AENQ8WTP8 325 aaKnown RBP10.73□□□□□ -0.69
VPS25-202ENST00000589219 POMGNT1Q8WZA1 660 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 SHC3Q92529 594 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 PSMB7Q99436 277 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 SH2D3AQ9BRG2 576 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 KIFC3Q9BVG8 833 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 NIFKQ9BYG3 293 aaKnown RBP10.73□□□□□ -0.69
VPS25-202ENST00000589219 PRO3102Q9H379 93 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 DHX33Q9H6R0 707 aaKnown RBP10.73□□□□□ -0.69
VPS25-202ENST00000589219 UBE2TQ9NPD8 197 aaPredicted RBP10.73□□□□□ -0.69
VPS25-202ENST00000589219 ADGRA3Q8IWK6 1321 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 RANBP2P49792 3224 aaKnown RBP10.72□□□□□ -0.69
VPS25-202ENST00000589219 GOLGA8IPA6NC78 632 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 GOLGA8JA6NMD2 632 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 CCDC188H7C350 402 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 KCNK3O14649 394 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 GAS2O43903 313 aaKnown RBP10.72□□□□□ -0.69
VPS25-202ENST00000589219 EXTL3O43909 919 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 MSCO60682 206 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 HOXC6P09630 235 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 TGFB3P10600 412 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 CXCR5P32302 372 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 LIG4P49917 911 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 SP4Q02446 784 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 PAK2Q13177 524 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 GRB14Q14449 540 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 PSMD6Q15008 389 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 CCL14Q16627 93 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 SLFN12LQ6IEE8 588 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 C11orf63Q6NUN7 778 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 SLC39A4Q6P5W5 647 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 METTL7BQ6UX53 244 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 EXOC8Q8IYI6 725 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 FAM71AQ8IYT1 594 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 C7orf61Q8IZ16 206 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 EIF1ADQ8N9N8 165 aaKnown RBP10.72□□□□□ -0.69
VPS25-202ENST00000589219 USP38Q8NB14 1042 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 DEPTORQ8TB45 409 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 MORC4Q8TE76 937 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 SLC7A3Q8WY07 619 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.72□□□□□ -0.69
VPS25-202ENST00000589219 DHX38Q92620 1227 aaKnown RBP10.72□□□□□ -0.69
VPS25-202ENST00000589219 SAAL1Q96ER3 474 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 RBM12Q9NTZ6 932 aaKnown RBP10.72□□□□□ -0.69
VPS25-202ENST00000589219 SLC5A4Q9NY91 659 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 BTBD7Q9P203 1132 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 AMFRQ9UKV5 643 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 TTC7AQ9ULT0 858 aaPredicted RBP10.72□□□□□ -0.69
VPS25-202ENST00000589219 STXBP5LQ9Y2K9 1186 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 STYXL1Q9Y6J8 313 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 FRMPD3Q5JV73 1810 aa10.72□□□□□ -0.69
VPS25-202ENST00000589219 ZNF233A6NK53 670 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 FOXN3O00409 490 aaPredicted RBP10.71□□□□□ -0.69
VPS25-202ENST00000589219 RTN2O75298 545 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 MTA2O94776 668 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 LDHAP00338 332 aaKnown RBP10.71□□□□□ -0.69
VPS25-202ENST00000589219 GZMAP12544 262 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 CCND3P30281 292 aaPredicted RBP10.71□□□□□ -0.69
VPS25-202ENST00000589219 ARL2P36404 184 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 PDE6CP51160 858 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 GCNT1Q02742 428 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 CYFIP1Q7L576 1253 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 TAS1R3Q7RTX0 852 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 DAAM2Q86T65 1068 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 DPP9Q86TI2 863 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 NT5DC3Q86UY8 548 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 NCAPG2Q86XI2 1143 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 IFT20Q8IY31 132 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 RPUSD2Q8IZ73 545 aaKnown RBP10.71□□□□□ -0.69
VPS25-202ENST00000589219 RASGEF1CQ8N431 466 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 SHCBP1Q8NEM2 672 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 EPS8L1Q8TE68 723 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 CAVIN3Q969G5 261 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 HES6Q96HZ4 224 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 NAP1L3Q99457 506 aaPredicted RBP10.71□□□□□ -0.69
VPS25-202ENST00000589219 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.71□□□□□ -0.694e-6■□□□□ 8.9
VPS25-202ENST00000589219 LRRC1Q9BTT6 524 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 ISCUQ9H1K1 167 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 TMEM134Q9H6X4 195 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 PDE11AQ9HCR9 933 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 C1orf112Q9NSG2 853 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 NRBP2Q9NSY0 501 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 SEPT11Q9NVA2 429 aaKnown RBP10.71□□□□□ -0.69
VPS25-202ENST00000589219 RAB20Q9NX57 234 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 EHD2Q9NZN4 543 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 TMEM59LQ9UK28 342 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms