RNA–Protein interactions for RNA: ENST00000589174.1

MRPL54-202, Transcript of mitochondrial ribosomal protein L54, humanhuman

TSL 3

Gene MRPL54, Length 491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-202ENST00000589174 PADI6Q6TGC4 694 aa12.18□□□□□ -0.46
MRPL54-202ENST00000589174 CYP26C1Q6V0L0 522 aa12.18□□□□□ -0.46
MRPL54-202ENST00000589174 ADSSL1Q8N142 457 aa12.18□□□□□ -0.46
MRPL54-202ENST00000589174 PRIMPOLQ96LW4 560 aa12.18□□□□□ -0.46
MRPL54-202ENST00000589174 PPP1R10Q96QC0 940 aaKnown RBP12.18□□□□□ -0.46
MRPL54-202ENST00000589174 POLR3CQ9BUI4 534 aaPredicted RBP12.18□□□□□ -0.46
MRPL54-202ENST00000589174 TRIM6Q9C030 488 aaPredicted RBP12.18□□□□□ -0.46
MRPL54-202ENST00000589174 IRF2BPLQ9H1B7 796 aa12.18□□□□□ -0.46
MRPL54-202ENST00000589174 TUFT1Q9NNX1 390 aa12.18□□□□□ -0.46
MRPL54-202ENST00000589174 PRMT7Q9NVM4 692 aaPredicted RBP12.18□□□□□ -0.46
MRPL54-202ENST00000589174 FBXL21Q9UKT6 434 aa12.18□□□□□ -0.46
MRPL54-202ENST00000589174 SSX2IPQ9Y2D8 614 aa12.18□□□□□ -0.46
MRPL54-202ENST00000589174 MTF2Q9Y483 593 aaPredicted RBP12.18□□□□□ -0.46
MRPL54-202ENST00000589174 R4GN57 208 aa12.18□□□□□ -0.46
MRPL54-202ENST00000589174 MYH11P35749 1972 aa12.18□□□□□ -0.46
MRPL54-202ENST00000589174 ACKR2O00590 384 aa12.17□□□□□ -0.46
MRPL54-202ENST00000589174 CCL16O15467 120 aa12.17□□□□□ -0.46
MRPL54-202ENST00000589174 TADA2AO75478 443 aa12.17□□□□□ -0.46
MRPL54-202ENST00000589174 PRKCBP05771 671 aa12.17□□□□□ -0.46
MRPL54-202ENST00000589174 FGFR3P22607 806 aa12.17□□□□□ -0.46
MRPL54-202ENST00000589174 RPA1P27694 616 aa12.17□□□□□ -0.46
MRPL54-202ENST00000589174 BRCC3P46736 316 aa12.17□□□□□ -0.46
MRPL54-202ENST00000589174 TOB1P50616 345 aaPredicted RBP12.17□□□□□ -0.46
MRPL54-202ENST00000589174 NEK4P51957 841 aa12.17□□□□□ -0.46
MRPL54-202ENST00000589174 MAPK7Q13164 816 aa12.17□□□□□ -0.46
MRPL54-202ENST00000589174 PSMD5Q16401 504 aa12.17□□□□□ -0.46
MRPL54-202ENST00000589174 SLC5A9Q2M3M2 681 aa12.17□□□□□ -0.46
MRPL54-202ENST00000589174 KCNK18Q7Z418 384 aa12.17□□□□□ -0.46
MRPL54-202ENST00000589174 WASF1Q92558 559 aa12.17□□□□□ -0.46
MRPL54-202ENST00000589174 NKD2Q969F2 451 aaPredicted RBP12.17□□□□□ -0.46
MRPL54-202ENST00000589174 DDX27Q96GQ7 796 aaKnown RBP12.17□□□□□ -0.46
MRPL54-202ENST00000589174 ZMAT2Q96NC0 199 aaKnown RBP12.17□□□□□ -0.46
MRPL54-202ENST00000589174 KIF2CQ99661 725 aa12.17□□□□□ -0.46
MRPL54-202ENST00000589174 RTP3Q9BQQ7 232 aa12.17□□□□□ -0.46
MRPL54-202ENST00000589174 TTPALQ9BTX7 342 aa12.17□□□□□ -0.46
MRPL54-202ENST00000589174 PLA2G2FQ9BZM2 168 aa12.17□□□□□ -0.46
MRPL54-202ENST00000589174 SLC2A4RGQ9NR83 387 aa12.17□□□□□ -0.46
MRPL54-202ENST00000589174 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.17□□□□□ -0.46
MRPL54-202ENST00000589174 DNMT3BQ9UBC3 853 aaKnown RBP12.17□□□□□ -0.46
MRPL54-202ENST00000589174 GDAQ9Y2T3 454 aa12.17□□□□□ -0.46
MRPL54-202ENST00000589174 EP300Q09472 2414 aaPredicted RBP12.17□□□□□ -0.46
MRPL54-202ENST00000589174 GPR179Q6PRD1 2367 aa12.16□□□□□ -0.46
MRPL54-202ENST00000589174 NCANO14594 1321 aa12.16□□□□□ -0.46
MRPL54-202ENST00000589174 SF3B1O75533 1304 aaKnown RBP eCLIP12.16□□□□□ -0.46
MRPL54-202ENST00000589174 PP2D1A8MPX8 630 aa12.16□□□□□ -0.46
MRPL54-202ENST00000589174 THP07101 528 aa12.16□□□□□ -0.46
MRPL54-202ENST00000589174 C8AP07357 584 aa12.16□□□□□ -0.46
MRPL54-202ENST00000589174 FSHRP23945 695 aa12.16□□□□□ -0.46
MRPL54-202ENST00000589174 TKTP29401 623 aaKnown RBP12.16□□□□□ -0.46
MRPL54-202ENST00000589174 CLCNKBP51801 687 aa12.16□□□□□ -0.46
MRPL54-202ENST00000589174 ANKRD1Q15327 319 aa12.16□□□□□ -0.46
MRPL54-202ENST00000589174 ALKAL1Q6UXT8 129 aa12.16□□□□□ -0.46
MRPL54-202ENST00000589174 CEP57Q86XR8 500 aa12.16□□□□□ -0.46
MRPL54-202ENST00000589174 MCPH1Q8NEM0 835 aa12.16□□□□□ -0.46
MRPL54-202ENST00000589174 FGF13Q92913 245 aa12.16□□□□□ -0.46
MRPL54-202ENST00000589174 MMTAG2Q9BU76 263 aaKnown RBP12.16□□□□□ -0.46
MRPL54-202ENST00000589174 DDX23Q9BUQ8 820 aaKnown RBP12.16□□□□□ -0.46
MRPL54-202ENST00000589174 PIDD1Q9HB75 910 aa12.16□□□□□ -0.46
MRPL54-202ENST00000589174 PTPRHQ9HD43 1115 aa12.16□□□□□ -0.46
MRPL54-202ENST00000589174 ARHGEF3Q9NR81 526 aa12.16□□□□□ -0.46
MRPL54-202ENST00000589174 MTRRQ9UBK8 725 aa12.16□□□□□ -0.46
MRPL54-202ENST00000589174 TICRRQ7Z2Z1 1910 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 TMEM189-UBE2V1I3L0A0 370 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 N4BP3O15049 544 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 TBC1D4O60343 1298 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 OR52Z1P0C646 297 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 LIG1P18858 919 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 OR1D2P34982 312 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 NAMPTP43490 491 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 STARD6P59095 220 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 FZD5Q13467 585 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 PRPF4BQ13523 1007 aaKnown RBP12.15□□□□□ -0.46
MRPL54-202ENST00000589174 RAB33AQ14088 237 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 UPP1Q16831 310 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 XKR4Q5GH76 650 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 SPECC1Q5M775 1068 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 PHLDB3Q6NSJ2 640 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 CCDC83Q8IWF9 413 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 NPAS3Q8IXF0 933 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 PJA1Q8NG27 643 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 SLC7A14Q8TBB6 771 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 ING5Q8WYH8 240 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 STAMQ92783 540 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 NACC1Q96RE7 527 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 CDT1Q9H211 546 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 BHMT2Q9H2M3 363 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 BRMS1Q9HCU9 246 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.15□□□□□ -0.46
MRPL54-202ENST00000589174 CDH7Q9ULB5 785 aa12.15□□□□□ -0.46
MRPL54-202ENST00000589174 ZNF292O60281 2723 aa12.15□□□□□ -0.47
MRPL54-202ENST00000589174 SP9P0CG40 484 aa12.14□□□□□ -0.47
MRPL54-202ENST00000589174 CD72P21854 359 aa12.14□□□□□ -0.47
MRPL54-202ENST00000589174 CDC25AP30304 524 aa12.14□□□□□ -0.47
MRPL54-202ENST00000589174 HOXA9P31269 272 aa12.14□□□□□ -0.47
MRPL54-202ENST00000589174 NCBP1Q09161 790 aaKnown RBP12.14□□□□□ -0.47
MRPL54-202ENST00000589174 SNW1Q13573 536 aaKnown RBP12.14□□□□□ -0.47
MRPL54-202ENST00000589174 MAPK6Q16659 721 aa12.14□□□□□ -0.47
MRPL54-202ENST00000589174 AXDND1Q5T1B0 1012 aaPredicted RBP12.14□□□□□ -0.47
MRPL54-202ENST00000589174 DCLRE1AQ6PJP8 1040 aa12.14□□□□□ -0.47
MRPL54-202ENST00000589174 ZBTB8OSQ8IWT0 167 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms