RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 ORAI2Q96SN7 254 aa4.6□□□□□ -1.67
SMAD4-207ENST00000589076 MYL10Q9BUA6 226 aa4.6□□□□□ -1.67
SMAD4-207ENST00000589076 INO80BQ9C086 356 aaPredicted RBP4.6□□□□□ -1.67
SMAD4-207ENST00000589076 WNT8AQ9H1J5 351 aa4.6□□□□□ -1.67
SMAD4-207ENST00000589076 MS4A5Q9H3V2 200 aa4.6□□□□□ -1.67
SMAD4-207ENST00000589076 AASDHPPTQ9NRN7 309 aa4.6□□□□□ -1.67
SMAD4-207ENST00000589076 RNF181Q9P0P0 153 aa4.6□□□□□ -1.67
SMAD4-207ENST00000589076 CHPF2Q9P2E5 772 aa4.6□□□□□ -1.67
SMAD4-207ENST00000589076 RBP3P10745 1247 aa4.59□□□□□ -1.67
SMAD4-207ENST00000589076 IARSP41252 1262 aaKnown RBP4.59□□□□□ -1.67
SMAD4-207ENST00000589076 CLK3P49761 638 aaKnown RBP4.59□□□□□ -1.67
SMAD4-207ENST00000589076 RAB27AP51159 221 aa4.59□□□□□ -1.67
SMAD4-207ENST00000589076 MANFP55145 182 aaKnown RBP4.59□□□□□ -1.67
SMAD4-207ENST00000589076 NRG3P56975 720 aa4.59□□□□□ -1.67
SMAD4-207ENST00000589076 KRTAP10-11P60412 298 aa4.59□□□□□ -1.67
SMAD4-207ENST00000589076 NFE2Q16621 373 aaPredicted RBP4.59□□□□□ -1.67
SMAD4-207ENST00000589076 PRR16Q569H4 304 aa4.59□□□□□ -1.67
SMAD4-207ENST00000589076 ARMC6Q6NXE6 501 aa4.59□□□□□ -1.67
SMAD4-207ENST00000589076 AMOTL1Q8IY63 956 aa4.59□□□□□ -1.67
SMAD4-207ENST00000589076 CDYL2Q8N8U2 506 aa4.59□□□□□ -1.67
SMAD4-207ENST00000589076 BOLLQ8N9W6 283 aaKnown RBP4.59□□□□□ -1.67
SMAD4-207ENST00000589076 RSAD2Q8WXG1 361 aa4.59□□□□□ -1.67
SMAD4-207ENST00000589076 ANO3Q9BYT9 981 aa4.59□□□□□ -1.67
SMAD4-207ENST00000589076 CPEB1Q9BZB8 566 aaKnown RBP4.59□□□□□ -1.67
SMAD4-207ENST00000589076 R3HDMLQ9H3Y0 253 aa4.59□□□□□ -1.67
SMAD4-207ENST00000589076 POFUT1Q9H488 388 aa4.59□□□□□ -1.67
SMAD4-207ENST00000589076 MKS1Q9NXB0 559 aa4.59□□□□□ -1.67
SMAD4-207ENST00000589076 MRFAP1Q9Y605 127 aa4.59□□□□□ -1.67
SMAD4-207ENST00000589076 PIPSLA2A3N6 862 aa4.58□□□□□ -1.68
SMAD4-207ENST00000589076 LCHNA4D1U4 455 aa4.58□□□□□ -1.68
SMAD4-207ENST00000589076 KLHL33A6NCF5 533 aa4.58□□□□□ -1.68
SMAD4-207ENST00000589076 ELL2O00472 640 aaPredicted RBP4.58□□□□□ -1.68
SMAD4-207ENST00000589076 AKAP10O43572 662 aa4.58□□□□□ -1.68
SMAD4-207ENST00000589076 SNUPNO95149 360 aaKnown RBP4.58□□□□□ -1.68
SMAD4-207ENST00000589076 PCDH8O95206 1070 aa4.58□□□□□ -1.68
SMAD4-207ENST00000589076 MT-CO1P00395 513 aa4.58□□□□□ -1.68
SMAD4-207ENST00000589076 ENPP1P22413 925 aa4.58□□□□□ -1.68
SMAD4-207ENST00000589076 DDX6P26196 483 aaKnown RBP eCLIP4.58□□□□□ -1.68
SMAD4-207ENST00000589076 SEC24CP53992 1094 aa4.58□□□□□ -1.68
SMAD4-207ENST00000589076 FAM189BP81408 668 aa4.58□□□□□ -1.68
SMAD4-207ENST00000589076 NHLH2Q02577 135 aa4.58□□□□□ -1.68
SMAD4-207ENST00000589076 UGT8Q16880 541 aa4.58□□□□□ -1.68
SMAD4-207ENST00000589076 ABCB5Q2M3G0 1257 aa4.58□□□□□ -1.68
SMAD4-207ENST00000589076 BEAN1Q3B7T3 259 aa4.58□□□□□ -1.68
SMAD4-207ENST00000589076 ZNF362Q5T0B9 420 aaPredicted RBP4.58□□□□□ -1.68
SMAD4-207ENST00000589076 LMBR1LQ6UX01 489 aa4.58□□□□□ -1.68
SMAD4-207ENST00000589076 PNMA8AQ86V59 439 aaPredicted RBP4.58□□□□□ -1.68
SMAD4-207ENST00000589076 FMNL3Q8IVF7 1028 aa4.58□□□□□ -1.68
SMAD4-207ENST00000589076 LILRA3Q8N6C8 439 aaPredicted RBP4.58□□□□□ -1.68
SMAD4-207ENST00000589076 CPEB3Q8NE35 698 aaKnown RBP4.58□□□□□ -1.68
SMAD4-207ENST00000589076 FERMT2Q96AC1 680 aa4.58□□□□□ -1.68
SMAD4-207ENST00000589076 HOOK2Q96ED9 719 aa4.58□□□□□ -1.68
SMAD4-207ENST00000589076 RAX2Q96IS3 184 aa4.58□□□□□ -1.68
SMAD4-207ENST00000589076 ENKD1Q9H0I2 346 aa4.58□□□□□ -1.68
SMAD4-207ENST00000589076 TCF7L1Q9HCS4 588 aa4.58□□□□□ -1.68
SMAD4-207ENST00000589076 SYBUQ9NX95 663 aa4.58□□□□□ -1.68
SMAD4-207ENST00000589076 POGKQ9P215 609 aa4.58□□□□□ -1.68
SMAD4-207ENST00000589076 PCDHB6Q9Y5E3 794 aa4.58□□□□□ -1.68
SMAD4-207ENST00000589076 EPN1Q9Y6I3 576 aaPredicted RBP4.58□□□□□ -1.68
SMAD4-207ENST00000589076 NUMBLQ9Y6R0 609 aa4.58□□□□□ -1.68
SMAD4-207ENST00000589076 MYPNQ86TC9 1320 aa4.57□□□□□ -1.68
SMAD4-207ENST00000589076 PRSS38A1L453 326 aa4.57□□□□□ -1.68
SMAD4-207ENST00000589076 FZD9O00144 591 aa4.57□□□□□ -1.68
SMAD4-207ENST00000589076 MTHFD2P13995 350 aa4.57□□□□□ -1.68
SMAD4-207ENST00000589076 ZFP36P26651 326 aaKnown RBP4.57□□□□□ -1.68
SMAD4-207ENST00000589076 RECQLP46063 649 aaPredicted RBP4.57□□□□□ -1.68
SMAD4-207ENST00000589076 RNASE9P60153 205 aaKnown RBP4.57□□□□□ -1.68
SMAD4-207ENST00000589076 MRPS9P82933 396 aaKnown RBP4.57□□□□□ -1.68
SMAD4-207ENST00000589076 MPP3Q13368 585 aa4.57□□□□□ -1.68
SMAD4-207ENST00000589076 PIN1Q13526 163 aaPredicted RBP4.57□□□□□ -1.68
SMAD4-207ENST00000589076 PPP2R5AQ15172 486 aa4.57□□□□□ -1.68
SMAD4-207ENST00000589076 PCBP2Q15366 365 aaKnown RBP eCLIP4.57□□□□□ -1.686e-7■■■■■ 45.8
SMAD4-207ENST00000589076 CT83Q5H943 113 aa4.57□□□□□ -1.68
SMAD4-207ENST00000589076 CCDC181Q5TID7 509 aa4.57□□□□□ -1.68
SMAD4-207ENST00000589076 EFCAB12Q6NXP0 572 aa4.57□□□□□ -1.68
SMAD4-207ENST00000589076 DRICH1Q6PGQ1 229 aaPredicted RBP4.57□□□□□ -1.68
SMAD4-207ENST00000589076 RAVER1Q8IY67 606 aaKnown RBP4.57□□□□□ -1.68
SMAD4-207ENST00000589076 SIMC1Q8NDZ2 872 aa4.57□□□□□ -1.68
SMAD4-207ENST00000589076 SSH1Q8WYL5 1049 aa4.57□□□□□ -1.68
SMAD4-207ENST00000589076 LINC00476Q8WZB0 136 aa4.57□□□□□ -1.68
SMAD4-207ENST00000589076 CDC5LQ99459 802 aaKnown RBP4.57□□□□□ -1.68
SMAD4-207ENST00000589076 DUSP26Q9BV47 211 aa4.57□□□□□ -1.68
SMAD4-207ENST00000589076 KIAA1586Q9HCI6 787 aa4.57□□□□□ -1.68
SMAD4-207ENST00000589076 ZIM2Q9NZV7 527 aa4.57□□□□□ -1.68
SMAD4-207ENST00000589076 TLK1Q9UKI8 766 aa4.57□□□□□ -1.68
SMAD4-207ENST00000589076 B5MCH6 92 aa4.56□□□□□ -1.68
SMAD4-207ENST00000589076 TSPAN6O43657 245 aa4.56□□□□□ -1.68
SMAD4-207ENST00000589076 RFPL1O75677 317 aa4.56□□□□□ -1.68
SMAD4-207ENST00000589076 ABLIM3O94929 683 aa4.56□□□□□ -1.68
SMAD4-207ENST00000589076 ESRRBO95718 433 aa4.56□□□□□ -1.68
SMAD4-207ENST00000589076 CLEC2LP0C7M8 214 aa4.56□□□□□ -1.68
SMAD4-207ENST00000589076 ZSCAN20P17040 1043 aaPredicted RBP4.56□□□□□ -1.68
SMAD4-207ENST00000589076 ITGB6P18564 788 aa4.56□□□□□ -1.68
SMAD4-207ENST00000589076 VCAM1P19320 739 aa4.56□□□□□ -1.68
SMAD4-207ENST00000589076 GPR15P49685 360 aa4.56□□□□□ -1.68
SMAD4-207ENST00000589076 CD69Q07108 199 aa4.56□□□□□ -1.68
SMAD4-207ENST00000589076 CLUL1Q15846 466 aa4.56□□□□□ -1.68
SMAD4-207ENST00000589076 SPDYE7PQ495Y7 208 aa4.56□□□□□ -1.68
SMAD4-207ENST00000589076 HSP90AB2PQ58FF8 381 aa4.56□□□□□ -1.68
SMAD4-207ENST00000589076 CCDC178Q5BJE1 867 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms