RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 FNBP1Q96RU3 617 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 PACSIN1Q9BY11 444 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 HAPLN2Q9GZV7 340 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 ABHD16BQ9H3Z7 469 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 RNPEPQ9H4A4 650 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 ZCCHC17Q9NP64 241 aaKnown RBP9.47□□□□□ -0.89
SMAD4-206ENST00000588860 RBAKQ9NYW8 714 aaPredicted RBP9.47□□□□□ -0.89
SMAD4-206ENST00000588860 HDAC6Q9UBN7 1215 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 PUF60Q9UHX1 559 aaKnown RBP9.47□□□□□ -0.89
SMAD4-206ENST00000588860 NENFQ9UMX5 172 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 CAPN6Q9Y6Q1 641 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 ATP8B3O60423 1300 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 ANO9A1A5B4 782 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 EFCAB8A8MWE9 144 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 FOXN3O00409 490 aaPredicted RBP9.46□□□□□ -0.9
SMAD4-206ENST00000588860 DDX3XO00571 662 aaKnown RBP eCLIP9.46□□□□□ -0.92e-13■□□□□ 10.8
SMAD4-206ENST00000588860 ASAP2O43150 1006 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 BUB1O43683 1085 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 TRPA1O75762 1119 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 GJB1P08034 283 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 MMP3P08254 477 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 INSRRP14616 1297 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 TNNI1P19237 187 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 TNFAIP3P21580 790 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 PIK3CAP42336 1068 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 GPC3P51654 580 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 MFAP3P55082 362 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 BMS1Q14692 1282 aaKnown RBP9.46□□□□□ -0.9
SMAD4-206ENST00000588860 KIAA0753Q2KHM9 967 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 ERCC6LQ2NKX8 1250 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 DUSP28Q4G0W2 176 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 MORN1Q5T089 497 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 LMBRD2Q68DH5 695 aaPredicted RBP9.46□□□□□ -0.9
SMAD4-206ENST00000588860 IQSEC1Q6DN90 963 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 ALKBH5Q6P6C2 394 aaKnown RBP9.46□□□□□ -0.9
SMAD4-206ENST00000588860 CRELD2Q6UXH1 353 aaPredicted RBP9.46□□□□□ -0.9
SMAD4-206ENST00000588860 ZPBP2Q6X784 338 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 SV2AQ7L0J3 742 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 SRGAP1Q7Z6B7 1085 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 PPM1KQ8N3J5 372 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 RNF10Q8N5U6 811 aaKnown RBP9.46□□□□□ -0.9
SMAD4-206ENST00000588860 MSL3Q8N5Y2 521 aaKnown RBP9.46□□□□□ -0.9
SMAD4-206ENST00000588860 UBXN4Q92575 508 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 KAT5Q92993 513 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 ZNF668Q96K58 619 aaPredicted RBP9.46□□□□□ -0.9
SMAD4-206ENST00000588860 FAM84AQ96KN4 292 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 CGRRF1Q99675 332 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 ACO2Q99798 780 aaKnown RBP9.46□□□□□ -0.9
SMAD4-206ENST00000588860 PDE11AQ9HCR9 933 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 SEPT11Q9NVA2 429 aaKnown RBP9.46□□□□□ -0.9
SMAD4-206ENST00000588860 RAB20Q9NX57 234 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 SALL4Q9UJQ4 1053 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 NAGPAQ9UK23 515 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 COQ4Q9Y3A0 265 aa9.46□□□□□ -0.9
SMAD4-206ENST00000588860 INO80B-WBP1J3KQ70 363 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 MAGEB2O15479 319 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 CLDN3O15551 220 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 NCK2O43639 380 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 MSCO60682 206 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 ZC3H11AO75152 810 aaKnown RBP eCLIP9.45□□□□□ -0.9
SMAD4-206ENST00000588860 HLA-DRAP01903 254 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 TFRCP02786 760 aaKnown RBP9.45□□□□□ -0.9
SMAD4-206ENST00000588860 NUDT7P0C024 238 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 H2AFZP0C0S5 128 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 KLRC1P26715 233 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 PHKA2P46019 1235 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 WNT7BP56706 349 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 CHMP4BP1P59074 171 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 TNFAIP2Q03169 654 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 CKAP4Q07065 602 aaKnown RBP9.45□□□□□ -0.9
SMAD4-206ENST00000588860 PPFIA1Q13136 1202 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 BIRC3Q13489 604 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 PRPF4BQ13523 1007 aaKnown RBP9.45□□□□□ -0.9
SMAD4-206ENST00000588860 PKN2Q16513 984 aaKnown RBP9.45□□□□□ -0.9
SMAD4-206ENST00000588860 SEZ6Q53EL9 994 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 PRAMEF19Q5SWL8 479 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 PAPD7Q5XG87 772 aaKnown RBP9.45□□□□□ -0.9
SMAD4-206ENST00000588860 C15orf39Q6ZRI6 1047 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 H2AFVQ71UI9 128 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 DNAAF5Q86Y56 855 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 BRSK2Q8IWQ3 736 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 SLC30A5Q8TAD4 765 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 OLIG1Q8TAK6 271 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 CAGE1Q8TC20 777 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 SLC20A1Q8WUM9 679 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 ZNF516Q92618 1163 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 KREMEN1Q96MU8 473 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 AGPAT1Q99943 283 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 C16orf70Q9BSU1 422 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 TCHPQ9BT92 498 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 PI4K2AQ9BTU6 479 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 INO80BQ9C086 356 aaPredicted RBP9.45□□□□□ -0.9
SMAD4-206ENST00000588860 C1orf112Q9NSG2 853 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 RYDENQ9NUL5 291 aaKnown RBP9.45□□□□□ -0.9
SMAD4-206ENST00000588860 RNF186Q9NXI6 227 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 FLRT1Q9NZU1 646 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 AKT3Q9Y243 479 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 JRKLQ9Y4A0 524 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 SAR1BQ9Y6B6 198 aa9.45□□□□□ -0.9
SMAD4-206ENST00000588860 PTPRJQ12913 1337 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms