RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 LINC00271P0C7V0 271 aa20.65■□□□□ 0.9
CLPTM1-209ENST00000588855 PPP1R2P41236 205 aa20.65■□□□□ 0.9
CLPTM1-209ENST00000588855 PMS1P54277 932 aaKnown RBP20.65■□□□□ 0.9
CLPTM1-209ENST00000588855 DPCR1Q3MIW9 517 aa20.65■□□□□ 0.9
CLPTM1-209ENST00000588855 XKR4Q5GH76 650 aa20.65■□□□□ 0.9
CLPTM1-209ENST00000588855 CENPPQ6IPU0 288 aa20.65■□□□□ 0.9
CLPTM1-209ENST00000588855 RSPH1Q8WYR4 309 aa20.65■□□□□ 0.9
CLPTM1-209ENST00000588855 P2RX5Q93086 422 aa20.65■□□□□ 0.9
CLPTM1-209ENST00000588855 LRCH3Q96II8 777 aa20.65■□□□□ 0.9
CLPTM1-209ENST00000588855 CWH43Q9H720 699 aa20.65■□□□□ 0.9
CLPTM1-209ENST00000588855 CTNND2Q9UQB3 1225 aa20.65■□□□□ 0.9
CLPTM1-209ENST00000588855 SZT2Q5T011 3432 aa20.65■□□□□ 0.9
CLPTM1-209ENST00000588855 TTC26A0AVF1 554 aa20.64■□□□□ 0.9
CLPTM1-209ENST00000588855 NLRP12P59046 1061 aa20.64■□□□□ 0.9
CLPTM1-209ENST00000588855 TAP1Q03518 808 aa20.64■□□□□ 0.9
CLPTM1-209ENST00000588855 RNASELQ05823 741 aaKnown RBP20.64■□□□□ 0.9
CLPTM1-209ENST00000588855 PPP2R2DQ66LE6 453 aa20.64■□□□□ 0.9
CLPTM1-209ENST00000588855 ZNF280BQ86YH2 543 aa20.64■□□□□ 0.9
CLPTM1-209ENST00000588855 CBWD2Q8IUF1 395 aa20.64■□□□□ 0.9
CLPTM1-209ENST00000588855 BRSK2Q8IWQ3 736 aa20.64■□□□□ 0.9
CLPTM1-209ENST00000588855 XXYLT1Q8NBI6 393 aa20.64■□□□□ 0.9
CLPTM1-209ENST00000588855 DHTKD1Q96HY7 919 aaPredicted RBP20.64■□□□□ 0.9
CLPTM1-209ENST00000588855 FBXL18Q96ME1 805 aa20.64■□□□□ 0.9
CLPTM1-209ENST00000588855 ZMAT2Q96NC0 199 aaKnown RBP20.64■□□□□ 0.9
CLPTM1-209ENST00000588855 DMAC2Q9NW81 257 aa20.64■□□□□ 0.9
CLPTM1-209ENST00000588855 CNTN3Q9P232 1028 aa20.64■□□□□ 0.9
CLPTM1-209ENST00000588855 LACTBL1A8MY62 500 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 DDHD2O94830 711 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 CCNE1P24864 410 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 WNT7BP56706 349 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 PPP2R3AQ06190 1150 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 GRIK3Q13003 919 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 NFIL3Q16649 462 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 SKOR2Q2VWA4 1001 aaPredicted RBP20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 ANKRD40Q6AI12 368 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 SLC9A9Q8IVB4 645 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 NELFBQ8WX92 580 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 FAM212AQ96EL1 285 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 NRDE2Q9H7Z3 1164 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 SLC28A3Q9HAS3 691 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 RBAKQ9NYW8 714 aaPredicted RBP20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 KANSL3Q9P2N6 904 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 TRANK1O15050 2925 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 SMIM28A0A1B0GU29 152 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 EXOC3O60645 756 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 ADRB2P07550 413 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 NR2F2P24468 414 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 SPAG1Q07617 926 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 SNRNP35Q16560 246 aaKnown RBP20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 EDRF1Q3B7T1 1238 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 SPOUT1Q5T280 376 aaKnown RBP20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 MLKLQ8NB16 471 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 RDH13Q8NBN7 331 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 TMEM174Q8WUU8 243 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 CLP1Q92989 425 aaKnown RBP20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 PPP1R10Q96QC0 940 aaKnown RBP20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 TSG101Q99816 390 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 C17orf80Q9BSJ5 609 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 PLEKHA5Q9HAU0 1116 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 DNAJB4Q9UDY4 337 aa20.63■□□□□ 0.89
CLPTM1-209ENST00000588855 ZC3H11AO75152 810 aaKnown RBP eCLIP20.62■□□□□ 0.89
CLPTM1-209ENST00000588855 THP07101 528 aa20.62■□□□□ 0.89
CLPTM1-209ENST00000588855 KCNE1P15382 129 aa20.62■□□□□ 0.89
CLPTM1-209ENST00000588855 PBX3P40426 434 aa20.62■□□□□ 0.89
CLPTM1-209ENST00000588855 CASP4P49662 377 aa20.62■□□□□ 0.89
CLPTM1-209ENST00000588855 STX17P56962 302 aa20.62■□□□□ 0.89
CLPTM1-209ENST00000588855 LRRC63Q05C16 580 aa20.62■□□□□ 0.89
CLPTM1-209ENST00000588855 PAK1Q13153 545 aa20.62■□□□□ 0.89
CLPTM1-209ENST00000588855 MYBPC2Q14324 1141 aa20.62■□□□□ 0.89
CLPTM1-209ENST00000588855 NAB2Q15742 525 aa20.62■□□□□ 0.89
CLPTM1-209ENST00000588855 KIAA1586Q9HCI6 787 aa20.62■□□□□ 0.89
CLPTM1-209ENST00000588855 MTUS1Q9ULD2 1270 aa20.62■□□□□ 0.89
CLPTM1-209ENST00000588855 ZNF233A6NK53 670 aa20.61■□□□□ 0.89
CLPTM1-209ENST00000588855 POU5F1Q01860 360 aaKnown RBP20.61■□□□□ 0.89
CLPTM1-209ENST00000588855 DSC1Q08554 894 aa20.61■□□□□ 0.89
CLPTM1-209ENST00000588855 CEP135Q66GS9 1140 aa20.61■□□□□ 0.89
CLPTM1-209ENST00000588855 JADE1Q6IE81 842 aa20.61■□□□□ 0.89
CLPTM1-209ENST00000588855 TTI2Q6NXR4 508 aa20.61■□□□□ 0.89
CLPTM1-209ENST00000588855 SASS6Q6UVJ0 657 aa20.61■□□□□ 0.89
CLPTM1-209ENST00000588855 EEF2KMTQ96G04 330 aa20.61■□□□□ 0.89
CLPTM1-209ENST00000588855 FAM193BQ96PV7 902 aaPredicted RBP20.61■□□□□ 0.89
CLPTM1-209ENST00000588855 TGS1Q96RS0 853 aaKnown RBP20.61■□□□□ 0.89
CLPTM1-209ENST00000588855 CERS4Q9HA82 394 aa20.61■□□□□ 0.89
CLPTM1-209ENST00000588855 CACNG4Q9UBN1 327 aa20.61■□□□□ 0.89
CLPTM1-209ENST00000588855 COL4A4P53420 1690 aaPredicted RBP20.61■□□□□ 0.89
CLPTM1-209ENST00000588855 PLXNA4Q9HCM2 1894 aa20.6■□□□□ 0.89
CLPTM1-209ENST00000588855 TULP1O00294 542 aaPredicted RBP20.6■□□□□ 0.89
CLPTM1-209ENST00000588855 IL18RAPO95256 599 aa20.6■□□□□ 0.89
CLPTM1-209ENST00000588855 NFICP08651 508 aa20.6■□□□□ 0.89
CLPTM1-209ENST00000588855 LAG3P18627 525 aa20.6■□□□□ 0.89
CLPTM1-209ENST00000588855 RPL13P26373 211 aaKnown RBP20.6■□□□□ 0.89
CLPTM1-209ENST00000588855 CTNNB1P35222 781 aa20.6■□□□□ 0.89
CLPTM1-209ENST00000588855 ERVK-21P61565 698 aa20.6■□□□□ 0.89
CLPTM1-209ENST00000588855 SOX4Q06945 474 aaPredicted RBP20.6■□□□□ 0.89
CLPTM1-209ENST00000588855 ADAM9Q13443 819 aa20.6■□□□□ 0.89
CLPTM1-209ENST00000588855 CD302Q8IX05 232 aa20.6■□□□□ 0.89
CLPTM1-209ENST00000588855 COLGALT2Q8IYK4 626 aa20.6■□□□□ 0.89
CLPTM1-209ENST00000588855 COLGALT1Q8NBJ5 622 aa20.6■□□□□ 0.89
CLPTM1-209ENST00000588855 C18orf25Q96B23 403 aaPredicted RBP20.6■□□□□ 0.89
CLPTM1-209ENST00000588855 KIF12Q96FN5 646 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms