RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 HNRNPA1P09651 372 aaKnown RBP eCLIP20.36■□□□□ 0.85
CCDC43-204ENST00000588687 FSHRP23945 695 aa20.36■□□□□ 0.85
CCDC43-204ENST00000588687 FAM171A1Q5VUB5 890 aa20.36■□□□□ 0.85
CCDC43-204ENST00000588687 EEF1DP3Q658K8 133 aa20.36■□□□□ 0.85
CCDC43-204ENST00000588687 PARM1Q6UWI2 310 aa20.36■□□□□ 0.85
CCDC43-204ENST00000588687 PJA1Q8NG27 643 aa20.36■□□□□ 0.85
CCDC43-204ENST00000588687 CDH7Q9ULB5 785 aa20.36■□□□□ 0.85
CCDC43-204ENST00000588687 ZFP37Q9Y6Q3 630 aaPredicted RBP20.36■□□□□ 0.85
CCDC43-204ENST00000588687 R4GN57 208 aa20.36■□□□□ 0.85
CCDC43-204ENST00000588687 N4BP3O15049 544 aa20.35■□□□□ 0.85
CCDC43-204ENST00000588687 C8AP07357 584 aa20.35■□□□□ 0.85
CCDC43-204ENST00000588687 FOSBP53539 338 aa20.35■□□□□ 0.85
CCDC43-204ENST00000588687 CD300LGQ6UXG3 332 aa20.35■□□□□ 0.85
CCDC43-204ENST00000588687 NOSTRINQ8IVI9 506 aa20.35■□□□□ 0.85
CCDC43-204ENST00000588687 ZBTB8OSQ8IWT0 167 aa20.35■□□□□ 0.85
CCDC43-204ENST00000588687 POLR3CQ9BUI4 534 aaPredicted RBP20.35■□□□□ 0.85
CCDC43-204ENST00000588687 DDX23Q9BUQ8 820 aaKnown RBP20.35■□□□□ 0.85
CCDC43-204ENST00000588687 FOXQ1Q9C009 403 aa20.35■□□□□ 0.85
CCDC43-204ENST00000588687 TMEM189-UBE2V1I3L0A0 370 aa20.34■□□□□ 0.85
CCDC43-204ENST00000588687 ACKR2O00590 384 aa20.34■□□□□ 0.85
CCDC43-204ENST00000588687 PRKCBP05771 671 aa20.34■□□□□ 0.85
CCDC43-204ENST00000588687 THP07101 528 aa20.34■□□□□ 0.85
CCDC43-204ENST00000588687 ATP2B1P20020 1258 aa20.34■□□□□ 0.85
CCDC43-204ENST00000588687 NAMPTP43490 491 aa20.34■□□□□ 0.85
CCDC43-204ENST00000588687 STARD6P59095 220 aa20.34■□□□□ 0.85
CCDC43-204ENST00000588687 PRPF4BQ13523 1007 aaKnown RBP20.34■□□□□ 0.85
CCDC43-204ENST00000588687 LIN9Q5TKA1 542 aa20.34■□□□□ 0.85
CCDC43-204ENST00000588687 DCLRE1AQ6PJP8 1040 aa20.34■□□□□ 0.85
CCDC43-204ENST00000588687 RSPO2Q6UXX9 243 aaPredicted RBP20.34■□□□□ 0.85
CCDC43-204ENST00000588687 MAML2Q8IZL2 1156 aaPredicted RBP20.34■□□□□ 0.85
CCDC43-204ENST00000588687 FGF13Q92913 245 aa20.34■□□□□ 0.85
CCDC43-204ENST00000588687 C2orf40Q9H1Z8 148 aa20.34■□□□□ 0.85
CCDC43-204ENST00000588687 SEMA4AQ9H3S1 761 aa20.34■□□□□ 0.85
CCDC43-204ENST00000588687 SIT1Q9Y3P8 196 aa20.34■□□□□ 0.85
CCDC43-204ENST00000588687 STK25O00506 426 aa20.33■□□□□ 0.85
CCDC43-204ENST00000588687 LRRN2O75325 713 aa20.33■□□□□ 0.85
CCDC43-204ENST00000588687 LMNAP02545 664 aaKnown RBP20.33■□□□□ 0.85
CCDC43-204ENST00000588687 CYP11B2P19099 503 aa20.33■□□□□ 0.85
CCDC43-204ENST00000588687 FGFR3P22607 806 aa20.33■□□□□ 0.85
CCDC43-204ENST00000588687 RPA1P27694 616 aa20.33■□□□□ 0.85
CCDC43-204ENST00000588687 MCM7P33993 719 aa20.33■□□□□ 0.85
CCDC43-204ENST00000588687 GPC5P78333 572 aa20.33■□□□□ 0.85
CCDC43-204ENST00000588687 RAB33AQ14088 237 aa20.33■□□□□ 0.85
CCDC43-204ENST00000588687 MAPK6Q16659 721 aa20.33■□□□□ 0.85
CCDC43-204ENST00000588687 SPECC1Q5M775 1068 aa20.33■□□□□ 0.85
CCDC43-204ENST00000588687 PADI6Q6TGC4 694 aa20.33■□□□□ 0.85
CCDC43-204ENST00000588687 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.33■□□□□ 0.85
CCDC43-204ENST00000588687 ERMP1Q7Z2K6 904 aa20.33■□□□□ 0.85
CCDC43-204ENST00000588687 ITFG1Q8TB96 612 aa20.33■□□□□ 0.85
CCDC43-204ENST00000588687 SLC7A14Q8TBB6 771 aa20.33■□□□□ 0.85
CCDC43-204ENST00000588687 PPP1R10Q96QC0 940 aaKnown RBP20.33■□□□□ 0.85
CCDC43-204ENST00000588687 NACC1Q96RE7 527 aa20.33■□□□□ 0.85
CCDC43-204ENST00000588687 KIFC3Q9BVG8 833 aa20.33■□□□□ 0.85
CCDC43-204ENST00000588687 MTRRQ9UBK8 725 aa20.33■□□□□ 0.85
CCDC43-204ENST00000588687 COL4A2P08572 1712 aa20.33■□□□□ 0.84
CCDC43-204ENST00000588687 CCL16O15467 120 aa20.32■□□□□ 0.84
CCDC43-204ENST00000588687 SP9P0CG40 484 aa20.32■□□□□ 0.84
CCDC43-204ENST00000588687 ID4P47928 161 aa20.32■□□□□ 0.84
CCDC43-204ENST00000588687 RBM25P49756 843 aaKnown RBP20.32■□□□□ 0.84
CCDC43-204ENST00000588687 ELAVL2Q12926 359 aaKnown RBP20.32■□□□□ 0.84
CCDC43-204ENST00000588687 PPM1LQ5SGD2 360 aa20.32■□□□□ 0.84
CCDC43-204ENST00000588687 CEP57Q86XR8 500 aa20.32■□□□□ 0.84
CCDC43-204ENST00000588687 C1orf210Q8IVY1 113 aa20.32■□□□□ 0.84
CCDC43-204ENST00000588687 NPAS3Q8IXF0 933 aa20.32■□□□□ 0.84
CCDC43-204ENST00000588687 C3orf58Q8NDZ4 430 aa20.32■□□□□ 0.84
CCDC43-204ENST00000588687 HCFC1R1Q9NWW0 138 aa20.32■□□□□ 0.84
CCDC43-204ENST00000588687 NCOR2Q9Y618 2525 aa20.31■□□□□ 0.84
CCDC43-204ENST00000588687 RFX1P22670 979 aa20.31■□□□□ 0.84
CCDC43-204ENST00000588687 ECM1Q16610 540 aa20.31■□□□□ 0.84
CCDC43-204ENST00000588687 GLRA4Q5JXX5 417 aa20.31■□□□□ 0.84
CCDC43-204ENST00000588687 NT5DC1Q5TFE4 455 aa20.31■□□□□ 0.84
CCDC43-204ENST00000588687 POTEHQ6S545 545 aa20.31■□□□□ 0.84
CCDC43-204ENST00000588687 OR52Z1P0C646 297 aa20.3■□□□□ 0.84
CCDC43-204ENST00000588687 DCAF4L1Q3SXM0 396 aa20.3■□□□□ 0.84
CCDC43-204ENST00000588687 AXDND1Q5T1B0 1012 aaPredicted RBP20.3■□□□□ 0.84
CCDC43-204ENST00000588687 PDXDC1Q6P996 788 aa20.3■□□□□ 0.84
CCDC43-204ENST00000588687 DDX27Q96GQ7 796 aaKnown RBP20.3■□□□□ 0.84
CCDC43-204ENST00000588687 ADPGKQ9BRR6 497 aa20.3■□□□□ 0.84
CCDC43-204ENST00000588687 DNMT3BQ9UBC3 853 aaKnown RBP20.3■□□□□ 0.84
CCDC43-204ENST00000588687 GDAQ9Y2T3 454 aa20.3■□□□□ 0.84
CCDC43-204ENST00000588687 PDCD11Q14690 1871 aaKnown RBP20.3■□□□□ 0.84
CCDC43-204ENST00000588687 ARHGEF35A5YM69 484 aa20.29■□□□□ 0.84
CCDC43-204ENST00000588687 XYLBO75191 536 aa20.29■□□□□ 0.84
CCDC43-204ENST00000588687 TKTP29401 623 aaKnown RBP20.29■□□□□ 0.84
CCDC43-204ENST00000588687 OR1D2P34982 312 aa20.29■□□□□ 0.84
CCDC43-204ENST00000588687 CLCNKBP51801 687 aa20.29■□□□□ 0.84
CCDC43-204ENST00000588687 SOX4Q06945 474 aaPredicted RBP20.29■□□□□ 0.84
CCDC43-204ENST00000588687 ORC2Q13416 577 aaPredicted RBP20.29■□□□□ 0.84
CCDC43-204ENST00000588687 TRIM29Q14134 588 aa20.29■□□□□ 0.84
CCDC43-204ENST00000588687 UPP1Q16831 310 aa20.29■□□□□ 0.84
CCDC43-204ENST00000588687 UVSSAQ2YD98 709 aa20.29■□□□□ 0.84
CCDC43-204ENST00000588687 MTSS1LQ765P7 747 aa20.29■□□□□ 0.84
CCDC43-204ENST00000588687 DEPTORQ8TB45 409 aa20.29■□□□□ 0.84
CCDC43-204ENST00000588687 RMDN1Q96DB5 314 aa20.29■□□□□ 0.84
CCDC43-204ENST00000588687 GOLGA2P5Q9HBQ8 144 aa20.29■□□□□ 0.84
CCDC43-204ENST00000588687 KCNH3Q9ULD8 1083 aa20.29■□□□□ 0.84
CCDC43-204ENST00000588687 BACE2Q9Y5Z0 518 aa20.29■□□□□ 0.84
CCDC43-204ENST00000588687 CDY1Q9Y6F8 540 aa20.29■□□□□ 0.84
CCDC43-204ENST00000588687 KANSL1LA0AUZ9 987 aa20.28■□□□□ 0.84
CCDC43-204ENST00000588687 SHISA7A6NL88 538 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms