RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 NBASA2RRP1 2371 aa7.92□□□□□ -1.14
TPM4-210ENST00000588507 TSPY2A6NKD2 308 aa7.91□□□□□ -1.14
TPM4-210ENST00000588507 RNF40O75150 1001 aa7.91□□□□□ -1.14
TPM4-210ENST00000588507 GPR32O75388 356 aa7.91□□□□□ -1.14
TPM4-210ENST00000588507 ITPKAP23677 461 aa7.91□□□□□ -1.14
TPM4-210ENST00000588507 GHRHRQ02643 423 aa7.91□□□□□ -1.14
TPM4-210ENST00000588507 ZNF543Q08ER8 600 aa7.91□□□□□ -1.14
TPM4-210ENST00000588507 GRSF1Q12849 480 aaKnown RBP eCLIP7.91□□□□□ -1.14
TPM4-210ENST00000588507 DMC1Q14565 340 aa7.91□□□□□ -1.14
TPM4-210ENST00000588507 UBE3CQ15386 1083 aa7.91□□□□□ -1.14
TPM4-210ENST00000588507 CDC37Q16543 378 aaPredicted RBP7.91□□□□□ -1.14
TPM4-210ENST00000588507 SPDYCQ5MJ68 293 aa7.91□□□□□ -1.14
TPM4-210ENST00000588507 SLC7A14Q8TBB6 771 aa7.91□□□□□ -1.14
TPM4-210ENST00000588507 E2F7Q96AV8 911 aa7.91□□□□□ -1.14
TPM4-210ENST00000588507 NRSN2Q9GZP1 204 aa7.91□□□□□ -1.14
TPM4-210ENST00000588507 GPRC5CQ9NQ84 441 aa7.91□□□□□ -1.14
TPM4-210ENST00000588507 STARD5Q9NSY2 213 aa7.91□□□□□ -1.14
TPM4-210ENST00000588507 RTEL1Q9NZ71 1219 aa7.91□□□□□ -1.14
TPM4-210ENST00000588507 PRG3Q9Y2Y8 225 aaPredicted RBP7.91□□□□□ -1.14
TPM4-210ENST00000588507 VWA8A3KMH1 1905 aa7.91□□□□□ -1.14
TPM4-210ENST00000588507 PCDH15Q96QU1 1955 aa7.9□□□□□ -1.14
TPM4-210ENST00000588507 WDR27A2RRH5 827 aa7.9□□□□□ -1.14
TPM4-210ENST00000588507 HEPACAM2A8MVW5 462 aa7.9□□□□□ -1.14
TPM4-210ENST00000588507 MICAL2O94851 1124 aa7.9□□□□□ -1.14
TPM4-210ENST00000588507 SLC3A2P08195 630 aaKnown RBP7.9□□□□□ -1.14
TPM4-210ENST00000588507 PDHBP11177 359 aa7.9□□□□□ -1.14
TPM4-210ENST00000588507 SKIP12755 728 aa7.9□□□□□ -1.14
TPM4-210ENST00000588507 JUPP14923 745 aa7.9□□□□□ -1.14
TPM4-210ENST00000588507 PTPN2P17706 415 aa7.9□□□□□ -1.14
TPM4-210ENST00000588507 PHKA2P46019 1235 aa7.9□□□□□ -1.14
TPM4-210ENST00000588507 NOVP48745 357 aa7.9□□□□□ -1.14
TPM4-210ENST00000588507 TDO2P48775 406 aa7.9□□□□□ -1.14
TPM4-210ENST00000588507 MRPS9P82933 396 aaKnown RBP7.9□□□□□ -1.14
TPM4-210ENST00000588507 USP41Q3LFD5 358 aa7.9□□□□□ -1.14
TPM4-210ENST00000588507 SAMD3Q8N6K7 520 aa7.9□□□□□ -1.14
TPM4-210ENST00000588507 EXD3Q8N9H8 876 aa7.9□□□□□ -1.14
TPM4-210ENST00000588507 ZNF248Q8NDW4 579 aa7.9□□□□□ -1.14
TPM4-210ENST00000588507 TSTD1Q8NFU3 115 aa7.9□□□□□ -1.14
TPM4-210ENST00000588507 TSC1Q92574 1164 aa7.9□□□□□ -1.14
TPM4-210ENST00000588507 B3GALT6Q96L58 329 aa7.9□□□□□ -1.14
TPM4-210ENST00000588507 STRBPQ96SI9 672 aaKnown RBP7.9□□□□□ -1.14
TPM4-210ENST00000588507 LPIN3Q9BQK8 851 aa7.9□□□□□ -1.14
TPM4-210ENST00000588507 PUS7LQ9H0K6 701 aaKnown RBP7.9□□□□□ -1.14
TPM4-210ENST00000588507 AZI2Q9H6S1 392 aa7.9□□□□□ -1.14
TPM4-210ENST00000588507 TRPV4Q9HBA0 871 aa7.9□□□□□ -1.14
TPM4-210ENST00000588507 KANSL3Q9P2N6 904 aa7.9□□□□□ -1.14
TPM4-210ENST00000588507 SVILO95425 2214 aa7.9□□□□□ -1.15
TPM4-210ENST00000588507 MYH7P12883 1935 aa7.9□□□□□ -1.15
TPM4-210ENST00000588507 TNRC6BQ9UPQ9 1833 aaKnown RBP7.89□□□□□ -1.15
TPM4-210ENST00000588507 CABIN1Q9Y6J0 2220 aa7.89□□□□□ -1.15
TPM4-210ENST00000588507 ZNF197O14709 1029 aa7.89□□□□□ -1.15
TPM4-210ENST00000588507 SURF6O75683 361 aaKnown RBP7.89□□□□□ -1.15
TPM4-210ENST00000588507 VTNP04004 478 aa7.89□□□□□ -1.15
TPM4-210ENST00000588507 TOP1P11387 765 aaKnown RBP7.89□□□□□ -1.15
TPM4-210ENST00000588507 HOXA13P31271 388 aaPredicted RBP7.89□□□□□ -1.15
TPM4-210ENST00000588507 HNF1BP35680 557 aa7.89□□□□□ -1.15
TPM4-210ENST00000588507 OR1G1P47890 313 aa7.89□□□□□ -1.15
TPM4-210ENST00000588507 TMEM196Q5HYL7 178 aa7.89□□□□□ -1.15
TPM4-210ENST00000588507 KIAA1614Q5VZ46 1190 aa7.89□□□□□ -1.15
TPM4-210ENST00000588507 LMBRD2Q68DH5 695 aaPredicted RBP7.89□□□□□ -1.15
TPM4-210ENST00000588507 FSTL4Q6MZW2 842 aa7.89□□□□□ -1.15
TPM4-210ENST00000588507 XKR5Q6UX68 686 aa7.89□□□□□ -1.15
TPM4-210ENST00000588507 RTL10Q7L3V2 364 aa7.89□□□□□ -1.15
TPM4-210ENST00000588507 ERICH1Q86X53 443 aa7.89□□□□□ -1.15
TPM4-210ENST00000588507 BAHD1Q8TBE0 780 aaPredicted RBP7.89□□□□□ -1.15
TPM4-210ENST00000588507 SSH1Q8WYL5 1049 aa7.89□□□□□ -1.15
TPM4-210ENST00000588507 OSBP2Q969R2 916 aa7.89□□□□□ -1.15
TPM4-210ENST00000588507 MOCOSQ96EN8 888 aa7.89□□□□□ -1.15
TPM4-210ENST00000588507 PNMA5Q96PV4 448 aa7.89□□□□□ -1.15
TPM4-210ENST00000588507 PCYT2Q99447 389 aa7.89□□□□□ -1.15
TPM4-210ENST00000588507 TMEM47Q9BQJ4 181 aa7.89□□□□□ -1.15
TPM4-210ENST00000588507 UBA5Q9GZZ9 404 aa7.89□□□□□ -1.15
TPM4-210ENST00000588507 GTSE1Q9NYZ3 720 aa7.89□□□□□ -1.15
TPM4-210ENST00000588507 OTOGQ6ZRI0 2925 aa7.89□□□□□ -1.15
TPM4-210ENST00000588507 CSMD1Q96PZ7 3565 aa7.89□□□□□ -1.15
TPM4-210ENST00000588507 MEIS3P2A8K0S8 358 aa7.88□□□□□ -1.15
TPM4-210ENST00000588507 OPLAHO14841 1288 aa7.88□□□□□ -1.15
TPM4-210ENST00000588507 CHGBP05060 677 aa7.88□□□□□ -1.15
TPM4-210ENST00000588507 EIF4BP23588 611 aaKnown RBP7.88□□□□□ -1.15
TPM4-210ENST00000588507 FCHO2Q0JRZ9 810 aa7.88□□□□□ -1.15
TPM4-210ENST00000588507 PTPAQ15257 358 aa7.88□□□□□ -1.15
TPM4-210ENST00000588507 QRICH1Q2TAL8 776 aa7.88□□□□□ -1.15
TPM4-210ENST00000588507 TBC1D25Q3MII6 688 aa7.88□□□□□ -1.15
TPM4-210ENST00000588507 CCDC157Q569K6 752 aa7.88□□□□□ -1.15
TPM4-210ENST00000588507 PRSS36Q5K4E3 855 aa7.88□□□□□ -1.15
TPM4-210ENST00000588507 ZNF787Q6DD87 383 aa7.88□□□□□ -1.15
TPM4-210ENST00000588507 DHRS13Q6UX07 377 aa7.88□□□□□ -1.15
TPM4-210ENST00000588507 NFXL1Q6ZNB6 911 aa7.88□□□□□ -1.15
TPM4-210ENST00000588507 HAUS6Q7Z4H7 955 aa7.88□□□□□ -1.15
TPM4-210ENST00000588507 RASSF3Q86WH2 238 aa7.88□□□□□ -1.15
TPM4-210ENST00000588507 FCHSD1Q86WN1 690 aa7.88□□□□□ -1.15
TPM4-210ENST00000588507 POTEDQ86YR6 584 aa7.88□□□□□ -1.15
TPM4-210ENST00000588507 RPLP0P6Q8NHW5 317 aa7.88□□□□□ -1.15
TPM4-210ENST00000588507 RHBDD1Q8TEB9 315 aa7.88□□□□□ -1.15
TPM4-210ENST00000588507 ACDQ96AP0 544 aa7.88□□□□□ -1.15
TPM4-210ENST00000588507 PGBD4Q96DM1 585 aa7.88□□□□□ -1.15
TPM4-210ENST00000588507 TCEAL4Q96EI5 215 aa7.88□□□□□ -1.15
TPM4-210ENST00000588507 NAF1Q96HR8 494 aaKnown RBP7.88□□□□□ -1.15
TPM4-210ENST00000588507 SPACA7Q96KW9 195 aa7.88□□□□□ -1.15
TPM4-210ENST00000588507 CNOT6LQ96LI5 555 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms