RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 REXO4Q9GZR2 422 aaKnown RBP4.63□□□□□ -1.67
VPS4B-203ENST00000588323 KIAA1586Q9HCI6 787 aa4.63□□□□□ -1.67
VPS4B-203ENST00000588323 MAST3O60307 1309 aa4.63□□□□□ -1.67
VPS4B-203ENST00000588323 CXorf49A8MYA2 514 aaPredicted RBP4.62□□□□□ -1.67
VPS4B-203ENST00000588323 ADCY6O43306 1168 aa4.62□□□□□ -1.67
VPS4B-203ENST00000588323 MST1LQ2TV78 715 aa4.62□□□□□ -1.67
VPS4B-203ENST00000588323 RRP12Q5JTH9 1297 aaKnown RBP4.62□□□□□ -1.67
VPS4B-203ENST00000588323 TSHZ3Q63HK5 1081 aa4.62□□□□□ -1.67
VPS4B-203ENST00000588323 MED25Q71SY5 747 aa4.62□□□□□ -1.67
VPS4B-203ENST00000588323 ZNF572Q7Z3I7 529 aaPredicted RBP4.62□□□□□ -1.67
VPS4B-203ENST00000588323 GPR149Q86SP6 731 aa4.62□□□□□ -1.67
VPS4B-203ENST00000588323 TRMT2AQ8IZ69 625 aaKnown RBP4.62□□□□□ -1.67
VPS4B-203ENST00000588323 TMEM132CQ8N3T6 1108 aa4.62□□□□□ -1.67
VPS4B-203ENST00000588323 REPS2Q8NFH8 660 aa4.62□□□□□ -1.67
VPS4B-203ENST00000588323 LEO1Q8WVC0 666 aaPredicted RBP4.62□□□□□ -1.67
VPS4B-203ENST00000588323 FEZ1Q99689 392 aa4.62□□□□□ -1.67
VPS4B-203ENST00000588323 LRFN3Q9BTN0 628 aa4.62□□□□□ -1.67
VPS4B-203ENST00000588323 PIF1Q9H611 641 aa4.62□□□□□ -1.67
VPS4B-203ENST00000588323 KLHL11Q9NVR0 708 aa4.62□□□□□ -1.67
VPS4B-203ENST00000588323 ABCC9O60706 1549 aa4.62□□□□□ -1.67
VPS4B-203ENST00000588323 INO80B-WBP1J3KQ70 363 aa4.61□□□□□ -1.67
VPS4B-203ENST00000588323 AKR1B10O60218 316 aa4.61□□□□□ -1.67
VPS4B-203ENST00000588323 CDC45O75419 566 aa4.61□□□□□ -1.67
VPS4B-203ENST00000588323 ADSLP30566 484 aaPredicted RBP4.61□□□□□ -1.67
VPS4B-203ENST00000588323 ZNF169Q14929 603 aaPredicted RBP4.61□□□□□ -1.67
VPS4B-203ENST00000588323 PDCD1Q15116 288 aa4.61□□□□□ -1.67
VPS4B-203ENST00000588323 FSCN1Q16658 493 aaKnown RBP4.61□□□□□ -1.67
VPS4B-203ENST00000588323 FAM98AQ8NCA5 519 aaKnown RBP4.61□□□□□ -1.67
VPS4B-203ENST00000588323 UBXN4Q92575 508 aa4.61□□□□□ -1.67
VPS4B-203ENST00000588323 RNF31Q96EP0 1072 aa4.61□□□□□ -1.67
VPS4B-203ENST00000588323 FUBP3Q96I24 572 aaKnown RBP eCLIP4.61□□□□□ -1.67
VPS4B-203ENST00000588323 RAX2Q96IS3 184 aa4.61□□□□□ -1.67
VPS4B-203ENST00000588323 Q96MF0 132 aa4.61□□□□□ -1.67
VPS4B-203ENST00000588323 UHRF1Q96T88 793 aaPredicted RBP4.61□□□□□ -1.67
VPS4B-203ENST00000588323 INO80BQ9C086 356 aaPredicted RBP4.61□□□□□ -1.67
VPS4B-203ENST00000588323 TBCCD1Q9NVR7 557 aa4.61□□□□□ -1.67
VPS4B-203ENST00000588323 DPP7Q9UHL4 492 aa4.61□□□□□ -1.67
VPS4B-203ENST00000588323 EDARQ9UNE0 448 aa4.61□□□□□ -1.67
VPS4B-203ENST00000588323 A0A1B0GTW7 788 aa4.6□□□□□ -1.67
VPS4B-203ENST00000588323 IGLV2-14P01704 120 aa4.6□□□□□ -1.67
VPS4B-203ENST00000588323 ELANEP08246 267 aa4.6□□□□□ -1.67
VPS4B-203ENST00000588323 CDK17Q00537 523 aa4.6□□□□□ -1.67
VPS4B-203ENST00000588323 SCAPQ12770 1279 aa4.6□□□□□ -1.67
VPS4B-203ENST00000588323 SP140Q13342 867 aa4.6□□□□□ -1.67
VPS4B-203ENST00000588323 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.6□□□□□ -1.67
VPS4B-203ENST00000588323 DALRD3Q5D0E6 543 aaKnown RBP4.6□□□□□ -1.67
VPS4B-203ENST00000588323 B3GNTL1Q67FW5 361 aaPredicted RBP4.6□□□□□ -1.67
VPS4B-203ENST00000588323 SP5Q6BEB4 398 aaPredicted RBP4.6□□□□□ -1.67
VPS4B-203ENST00000588323 FAM180AQ6UWF9 173 aa4.6□□□□□ -1.67
VPS4B-203ENST00000588323 Q6ZNX1 250 aa4.6□□□□□ -1.67
VPS4B-203ENST00000588323 DRC7Q8IY82 874 aa4.6□□□□□ -1.67
VPS4B-203ENST00000588323 GPR156Q8NFN8 814 aa4.6□□□□□ -1.67
VPS4B-203ENST00000588323 FBXO18Q8NFZ0 1043 aa4.6□□□□□ -1.67
VPS4B-203ENST00000588323 OR7D4Q8NG98 312 aa4.6□□□□□ -1.67
VPS4B-203ENST00000588323 RIN2Q8WYP3 895 aaPredicted RBP4.6□□□□□ -1.67
VPS4B-203ENST00000588323 USP7Q93009 1102 aa4.6□□□□□ -1.67
VPS4B-203ENST00000588323 ACAP3Q96P50 834 aa4.6□□□□□ -1.67
VPS4B-203ENST00000588323 ZSWIM1Q9BR11 485 aa4.6□□□□□ -1.67
VPS4B-203ENST00000588323 RNPEPQ9H4A4 650 aa4.6□□□□□ -1.67
VPS4B-203ENST00000588323 BCO1Q9HAY6 547 aa4.6□□□□□ -1.67
VPS4B-203ENST00000588323 GALNT9Q9HCQ5 603 aa4.6□□□□□ -1.67
VPS4B-203ENST00000588323 CASS4Q9NQ75 786 aa4.6□□□□□ -1.67
VPS4B-203ENST00000588323 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.59□□□□□ -1.67
VPS4B-203ENST00000588323 RAP2AP10114 183 aa4.59□□□□□ -1.67
VPS4B-203ENST00000588323 ALOX15P16050 662 aaPredicted RBP4.59□□□□□ -1.67
VPS4B-203ENST00000588323 ENPP1P22413 925 aa4.59□□□□□ -1.67
VPS4B-203ENST00000588323 ECHS1P30084 290 aa4.59□□□□□ -1.67
VPS4B-203ENST00000588323 PER3P56645 1201 aa4.59□□□□□ -1.67
VPS4B-203ENST00000588323 SIM1P81133 766 aaPredicted RBP4.59□□□□□ -1.67
VPS4B-203ENST00000588323 OCA2Q04671 838 aa4.59□□□□□ -1.67
VPS4B-203ENST00000588323 GJC2Q5T442 439 aaPredicted RBP4.59□□□□□ -1.67
VPS4B-203ENST00000588323 AFMIDQ63HM1 303 aa4.59□□□□□ -1.67
VPS4B-203ENST00000588323 PNPLA7Q6ZV29 1317 aa4.59□□□□□ -1.67
VPS4B-203ENST00000588323 GLCCI1Q86VQ1 547 aa4.59□□□□□ -1.67
VPS4B-203ENST00000588323 ARHGEF25Q86VW2 580 aa4.59□□□□□ -1.67
VPS4B-203ENST00000588323 DRC1Q96MC2 740 aa4.59□□□□□ -1.67
VPS4B-203ENST00000588323 MRI1Q9BV20 369 aa4.59□□□□□ -1.67
VPS4B-203ENST00000588323 SALL3Q9BXA9 1300 aa4.59□□□□□ -1.67
VPS4B-203ENST00000588323 ALG13Q9NP73 1137 aaKnown RBP4.59□□□□□ -1.67
VPS4B-203ENST00000588323 TOPORSQ9NS56 1045 aaPredicted RBP4.59□□□□□ -1.67
VPS4B-203ENST00000588323 MOCS1Q9NZB8 636 aa4.59□□□□□ -1.67
VPS4B-203ENST00000588323 LRIT1Q9P2V4 623 aa4.59□□□□□ -1.67
VPS4B-203ENST00000588323 FRMD4BQ9Y2L6 1034 aa4.59□□□□□ -1.67
VPS4B-203ENST00000588323 ATRNL1Q5VV63 1379 aa4.58□□□□□ -1.68
VPS4B-203ENST00000588323 GSG1L2A8MUP6 293 aa4.58□□□□□ -1.68
VPS4B-203ENST00000588323 POMCP01189 267 aa4.58□□□□□ -1.68
VPS4B-203ENST00000588323 IL2RBP14784 551 aa4.58□□□□□ -1.68
VPS4B-203ENST00000588323 ATP5JP18859 108 aa4.58□□□□□ -1.68
VPS4B-203ENST00000588323 RARRES1P49788 294 aa4.58□□□□□ -1.68
VPS4B-203ENST00000588323 SESN3P58005 492 aa4.58□□□□□ -1.68
VPS4B-203ENST00000588323 KRTAP10-11P60412 298 aa4.58□□□□□ -1.68
VPS4B-203ENST00000588323 CXADRP78310 365 aa4.58□□□□□ -1.68
VPS4B-203ENST00000588323 CCT2P78371 535 aaKnown RBP4.58□□□□□ -1.68
VPS4B-203ENST00000588323 MRPS35P82673 323 aaKnown RBP4.58□□□□□ -1.68
VPS4B-203ENST00000588323 ZNF362Q5T0B9 420 aaPredicted RBP4.58□□□□□ -1.68
VPS4B-203ENST00000588323 FOXR2Q6PJQ5 311 aa4.58□□□□□ -1.68
VPS4B-203ENST00000588323 FAM43AQ8N2R8 423 aa4.58□□□□□ -1.68
VPS4B-203ENST00000588323 PQLC1Q8N2U9 271 aa4.58□□□□□ -1.68
VPS4B-203ENST00000588323 ZNF384Q8TF68 577 aa4.58□□□□□ -1.68
VPS4B-203ENST00000588323 FUBP1Q96AE4 644 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms