RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 KLHL23Q8NBE8 558 aa12.93□□□□□ -0.34
SDHDP1-201ENST00000588055 KIAA0895Q8NCT3 520 aa12.93□□□□□ -0.34
SDHDP1-201ENST00000588055 MYLIPQ8WY64 445 aa12.93□□□□□ -0.34
SDHDP1-201ENST00000588055 PPP2R3CQ969Q6 453 aa12.93□□□□□ -0.34
SDHDP1-201ENST00000588055 FAM212AQ96EL1 285 aa12.93□□□□□ -0.34
SDHDP1-201ENST00000588055 UROC1Q96N76 676 aa12.93□□□□□ -0.34
SDHDP1-201ENST00000588055 CDX2Q99626 313 aaPredicted RBP12.93□□□□□ -0.34
SDHDP1-201ENST00000588055 NRDE2Q9H7Z3 1164 aa12.93□□□□□ -0.34
SDHDP1-201ENST00000588055 CNTN3Q9P232 1028 aa12.93□□□□□ -0.34
SDHDP1-201ENST00000588055 FAN1Q9Y2M0 1017 aa12.93□□□□□ -0.34
SDHDP1-201ENST00000588055 STYXL1Q9Y6J8 313 aa12.93□□□□□ -0.34
SDHDP1-201ENST00000588055 CALUO43852 315 aaPredicted RBP12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 EXTL3O43909 919 aa12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 LPXNO60711 386 aa12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 IL18RAPO95256 599 aa12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 ALDH2P05091 517 aa12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 LINC00271P0C7V0 271 aa12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 PBX3P40426 434 aa12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 PPP1R2P41236 205 aa12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 ACOT2P49753 483 aa12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 POU5F1Q01860 360 aaKnown RBP12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 ZNF658Q5TYW1 1059 aaPredicted RBP12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 ZNF280BQ86YH2 543 aa12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 GPD1LQ8N335 351 aa12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 MICALL1Q8N3F8 863 aa12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 SAAL1Q96ER3 474 aa12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 KIF12Q96FN5 646 aa12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 GUCD1Q96NT3 240 aa12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 TSPAN18Q96SJ8 248 aa12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 CBWD1Q9BRT8 395 aa12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 FAM213AQ9BRX8 229 aa12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 NUP62CLQ9H1M0 184 aa12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 KIAA1586Q9HCI6 787 aa12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 AGPAT3Q9NRZ7 376 aa12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 RBAKQ9NYW8 714 aaPredicted RBP12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 DNAJB4Q9UDY4 337 aa12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 PRG3Q9Y2Y8 225 aaPredicted RBP12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 PCDHA5Q9Y5H7 936 aa12.92□□□□□ -0.34
SDHDP1-201ENST00000588055 SMIM28A0A1B0GU29 152 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 EPOPA6NHQ4 379 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 CASTOR2A6NHX0 329 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 PTGESO14684 152 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 PSMA7O14818 248 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 CSPG5O95196 566 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 GALTP07902 379 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 KCNE1P15382 129 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 ADSSP30520 456 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 CA8P35219 290 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 TNFSF9P41273 254 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 SLC11A1P49279 550 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 CYP2J2P51589 502 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 AFF1P51825 1210 aaKnown RBP12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 PLCB3Q01970 1234 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 DSC1Q08554 894 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 ENOX2Q16206 610 aaKnown RBP12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 COLGALT2Q8IYK4 626 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 SLC39A11Q8N1S5 342 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 GUF1Q8N442 669 aaKnown RBP12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 MRPL38Q96DV4 380 aaKnown RBP12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 PPP1R10Q96QC0 940 aaKnown RBP12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 TSG101Q99816 390 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 COLEC11Q9BWP8 271 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 HAPLN2Q9GZV7 340 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 PCIF1Q9H4Z3 704 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 ASB7Q9H672 318 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 ALG13Q9NP73 1137 aaKnown RBP12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 ENTPD7Q9NQZ7 604 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 TLR9Q9NR96 1032 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 LMBRD1Q9NUN5 540 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 HSPBP1Q9NZL4 362 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 LMCD1Q9NZU5 365 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 CPSF3Q9UKF6 684 aaKnown RBP12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 UBQLN1Q9UMX0 589 aaKnown RBP12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 PLAGL2Q9UPG8 496 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 LZTS1Q9Y250 596 aa12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 PDCD11Q14690 1871 aaKnown RBP12.91□□□□□ -0.34
SDHDP1-201ENST00000588055 SF3B1O75533 1304 aaKnown RBP eCLIP12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 TTC26A0AVF1 554 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 ZNF233A6NK53 670 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 NT5C1B-RDH14C9J2C7 533 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 RFXAPO00287 272 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 PDXKO00764 312 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 NRP1O14786 923 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 FAM189A1O60320 539 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 EXOC3O60645 756 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 DDHD2O94830 711 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 ITGB1P05556 798 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 PTMSP20962 102 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 RPL13P26373 211 aaKnown RBP12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 TMEM132DQ14C87 1099 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 CAMK4Q16566 473 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 SLC10A6Q3KNW5 377 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 ZBTB41Q5SVQ8 909 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 PDE12Q6L8Q7 609 aaKnown RBP12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 BRSK2Q8IWQ3 736 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 TRIML1Q8N9V2 468 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 XXYLT1Q8NBI6 393 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 GSTCDQ8NEC7 633 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 BEST2Q8NFU1 509 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 SPATA20Q8TB22 786 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms